| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | acggaag | 7 | ||
| MIMAT0017760 | esi-miR3454b-3p | 7 | ....... | 1 | 100 |
| MIMAT0017754 | esi-miR3454f-3p | 7 | ....... | 1 | 100 |
| MIMAT0037295 | ame-miR-9890 | 3 | _...... | 8 | 85 |
| MIMAT0037031 | ssc-miR-9813-5p | 1 | _...... | 6 | 85 |
| MIMAT0036777 | oha-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0036571 | tch-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0036335 | ocu-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0036022 | chi-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0033253 | ppc-miR-8350-3p | 8 | _...... | 3 | 85 |
| MIMAT0032655 | ssa-miR-462b-5p | 3 | ......_ | 8 | 85 |
| MIMAT0032653 | ssa-miR-462a-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030162 | bdi-miR5049-5p | 8 | _...... | 3 | 85 |
| MIMAT0030038 | oar-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0029896 | mmu-miR-7685-5p | 8 | _...... | 3 | 85 |
| MIMAT0029886 | mmu-miR-7683-5p | 6 | ......_ | 1 | 85 |
| MIMAT0029519 | ipu-miR-462 | 3 | ......_ | 8 | 85 |
| MIMAT0027912 | mmu-miR-7004-5p | 6 | ......_ | 1 | 85 |
| MIMAT0025297 | mja-miR-6489-3p | 3 | ......_ | 8 | 85 |
| MIMAT0024598 | hsa-miR-6125 | 2 | _...... | 7 | 85 |
| MIMAT0024093 | ggo-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0023822 | cgr-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0023453 | hco-miR-5951 | 8 | ......_ | 3 | 85 |
| MIMAT0023282 | osa-miR5810 | 1 | ......_ | 6 | 85 |
| MIMAT0023273 | osa-miR812u | 1 | ......_ | 6 | 85 |
| MIMAT0023272 | osa-miR812t | 1 | ......_ | 6 | 85 |
| MIMAT0022379 | mmu-miR-5625-5p | 3 | _...... | 8 | 85 |
| MIMAT0022016 | aca-miR-5403 | 1 | ......_ | 6 | 85 |
| MIMAT0021824 | aca-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0021185 | mtr-miR5224b | 1 | _...... | 6 | 85 |
| MIMAT0020157 | dme-miR-4947-5p | 6 | _...... | 1 | 85 |
| MIMAT0019738 | hsa-miR-4664-3p | 6 | _...... | 1 | 85 |
| MIMAT0019680 | osa-miR812n-3p | 1 | ......_ | 6 | 85 |
| MIMAT0018256 | gma-miR4361 | 2 | _...... | 7 | 85 |
| MIMAT0015785 | ppy-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0017727 | aly-miR3446-5p | 3 | _...... | 8 | 85 |
| MIMAT0015550 | bmo-miR-3364 | 6 | ......_ | 1 | 85 |
| MIMAT0013876 | ssc-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0013079 | eca-miR-191a | 3 | ......_ | 8 | 85 |
| MIMAT0012821 | ptr-miR-718 | 6 | _...... | 1 | 85 |
| MIMAT0012735 | hsa-miR-718 | 6 | _...... | 1 | 85 |
| MIMAT0011863 | bta-miR-2331-5p | 8 | _...... | 3 | 85 |
| MIMAT0011230 | sme-miR-2147a | 1 | _...... | 6 | 85 |
| MIMAT0009939 | cfa-miR-718 | 6 | _...... | 1 | 85 |
| MIMAT0009699 | aqu-miR-2020-3p | 1 | _...... | 6 | 85 |
| MIMAT0008056 | ptr-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0007820 | osa-miR1868 | 3 | ......_ | 8 | 85 |
| MIMAT0006638 | cfa-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0006223 | mml-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0007388 | gma-miR1526 | 2 | _...... | 7 | 85 |
| MIMAT0007152 | oan-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0005362 | tae-miR1127a | 8 | _...... | 3 | 85 |
| MIMAT0004152 | mdo-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0003819 | bta-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0003689 | xtr-miR-191 | 3 | ......_ | 8 | 85 |
| MIMAT0003514 | mmu-miR-718 | 6 | _...... | 1 | 85 |
| MIMAT0001855 | dre-miR-462 | 3 | ......_ | 8 | 85 |
| MIMAT0000866 | rno-miR-191a-5p | 3 | ......_ | 8 | 85 |
| MIMAT0000440 | hsa-miR-191-5p | 3 | ......_ | 8 | 85 |
| MIMAT0000221 | mmu-miR-191-5p | 3 | ......_ | 8 | 85 |
