Result for your query miRNA sequence
>prv-miR-1-5p
acggcucc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1acggctcc8
MIMAT0032843cel-miR-8211-3p1......._787
MIMAT0029824mmu-miR-7659-5p8_.......287
MIMAT0015522bmo-miR-33358......._287
MIMAT0012416dps-miR-2573-5p8_.......287
MIMAT0007358gma-miR171a8......._287
MIMAT0005224smo-miR171b8......._287
MIMAT0029770cbn-miR-341......a.887
MIMAT0027859mmu-miR-6978-3p1......t.887
MIMAT0026772mdo-miR-1548-5p1.g......887
MIMAT0015093cel-miR-34-3p1......a.887
MIMAT0037304cre-miR9897-3p3......__875
MIMAT0037191ata-miR171a-3p7_......_275
MIMAT0037101ata-miR171c-3p8_......_375
MIMAT0036355gma-miR97352......__775
MIMAT0035683bra-miR408-5p7__......275
MIMAT0035519bdi-miR171f7_......_275
MIMAT0035482sly-miR171e8_......_375
MIMAT0034948efu-miR-92901__......675
MIMAT0034797efu-miR-9209d7......__275
MIMAT0034764eca-miR-91832_......_775
MIMAT0033925atr-miR171b8_......_375
MIMAT0033468str-miR-8379b-3p7......__275
MIMAT0033348str-miR-8369-5p8__......375
MIMAT0033101ppc-miR-8294-5p3_......_875
MIMAT0032962ppc-miR-8249-5p3_......_875
MIMAT0031765hbv-miR-B3RC-3p1_......_675
MIMAT0031467ppe-miR171d-3p7_......_275
MIMAT0031311stu-miR4797_......_275
MIMAT0031302stu-miR171d-3p8_......_375
MIMAT0031248stu-miR171b-3p8_......_375
MIMAT0030832prd-miR-7964b-5p7......__275
MIMAT0030828prd-miR-7964a-5p7......__275
MIMAT0030582prd-miR-7896-5p8_......_375
MIMAT0030530prd-miR-36-5p2......__775
MIMAT0030495prd-miR-34-3p1......__675
MIMAT0029848mmu-miR-7671-5p2__......775
MIMAT0029831mmu-miR-7662-3p7__......275
MIMAT0029318lja-miR171d-5p8_......_375
MIMAT0029316lja-miR171c7_......_275
MIMAT0029240mes-miR171d8_......_375
MIMAT0029239mes-miR171c8_......_375
MIMAT0029238mes-miR171b8_......_375
MIMAT0028309mml-miR-7181-3p7__......275
MIMAT0026123cme-miR171b8_......_375
MIMAT0026122cme-miR171d8_......_375
MIMAT0026085cme-miR171i8_......_375
MIMAT0025951mdm-miR171n8_......_375
MIMAT0025950mdm-miR171m8_......_375
MIMAT0025949mdm-miR171l8_......_375
MIMAT0025948mdm-miR171k8_......_375
MIMAT0025947mdm-miR171j8_......_375
MIMAT0025946mdm-miR171i7_......_275
MIMAT0025943mdm-miR171f8_......_375
MIMAT0025939mdm-miR171b8_......_375
MIMAT0025938mdm-miR171a8_......_375
MIMAT0027554hsa-miR-6827-5p8__......375
MIMAT0027384hsa-miR-6741-3p2_......_775
MIMAT0025630gga-miR-6561-3p7__......275
MIMAT0025233ptc-miR64321_......_675
MIMAT0027309ppe-miR171b8_......_375
MIMAT0027285ppe-miR171h8_......_375
MIMAT0024793hbr-miR61736......__175
MIMAT0024687nta-miR171b8_......_375
MIMAT0027224lus-miR171i8_......_375
MIMAT0027219lus-miR171h8_......_375
MIMAT0024243ggo-miR-3373......__875
MIMAT0024132ggo-miR-7601_......_675
MIMAT0023979cgr-miR-505-5p7__......275
MIMAT0023236gma-miR171t8_......_375
MIMAT0023234gma-miR171s7_......_275
MIMAT0023229gma-miR171r7_......_275
MIMAT0023215gma-miR171q8_......_375
MIMAT0023208gma-miR171p8_......_375
MIMAT0023204gma-miR171o-3p8_......_375
MIMAT0023202gma-miR171n8_......_375
MIMAT0023200gma-miR171m8_......_375
MIMAT0023132mtr-miR171g7_......_275
MIMAT0023032tur-miR-5728-1-5p8......__375
MIMAT0022513ssl-miR171b8_......_375
MIMAT0022512ssl-miR171a8_......_375
MIMAT0022455gma-miR5037d8__......375
MIMAT0021979aca-miR-497-3p8......__375
MIMAT0022995gma-miR171k-3p8_......_375
MIMAT0021469asu-miR-72-3p6......__175
MIMAT0021438asu-miR-34-3p2......__775
MIMAT0021366mtr-miR5295d2_......_775
MIMAT0021365mtr-miR5295c2_......_775
MIMAT0021364mtr-miR5295b2_......_775
MIMAT0021363mtr-miR5295a2_......_775
MIMAT0021269mtr-miR171h7_......_275
MIMAT0022983gma-miR169i-5p7_......_275
MIMAT0021057gma-miR171i-3p8_......_375
MIMAT0019080hsa-miR-45377_......_275
MIMAT0018967hsa-miR-44481__......675
MIMAT0018456csi-miR171a8_......_375
MIMAT0018455csi-miR171b7_......_275
MIMAT0022972gma-miR171c-3p8_......_375
MIMAT0018227tae-miR171b8_......_375
MIMAT0016896hsa-miR-42681__......675
MIMAT0016609cin-miR-4060-3p6......__175
MIMAT0016104ppy-miR-7601_......_675
MIMAT0016081ppy-miR-6473__......875
MIMAT0015838ppy-miR-337-5p3......__875
MIMAT0017632aly-miR845a-3p1_......_675
MIMAT0017592aly-miR771-3p2__......775
MIMAT0017520aly-miR171c-3p8_......_375
MIMAT0017518aly-miR171b-3p8_......_375
MIMAT0014173rco-miR171b8_......_375
MIMAT0014172rco-miR171a8_......_375
MIMAT0014082ctr-miR1718_......_375
MIMAT0015352zma-miR397a-3p7......__275
MIMAT0013862bta-miR-29047__......275
MIMAT0013134eca-miR-337-5p3......__875
MIMAT0012788mml-miR-7601_......_675
MIMAT0013625bmo-miR-745-5p1_......_675
MIMAT0015303bmo-miR-306a-3p8_......_375
MIMAT0010170bol-miR171a8_......_375
MIMAT0010164bra-miR171d8_......_375
MIMAT0010163bra-miR171c8_......_375
MIMAT0010162bra-miR171b8_......_375
MIMAT0010161bra-miR171a8_......_375
MIMAT0009908cfa-miR-5057__......275
MIMAT0022951bta-miR-760-3p1_......_675
MIMAT0008319ptr-miR-7601_......_675
MIMAT0007925sly-miR171d8_......_375
MIMAT0007923sly-miR171b8_......_375
MIMAT0006555vvi-miR171g8_......_375
MIMAT0026892mml-miR-505-5p8__......375
MIMAT0006275mml-miR-337-5p3......__875
MIMAT0007607gga-miR-1712-5p1__......675
MIMAT0007524gga-miR-1648-5p1_......_675
MIMAT0007442gga-miR-15817_......_275
MIMAT0007363gma-miR171b-3p7_......_275
MIMAT0005996ptc-miR171j7_......_275
MIMAT0005995ptc-miR171m7_......_275
MIMAT0005994ptc-miR171l-3p7_......_275
MIMAT0005696vvi-miR171f8_......_375
MIMAT0005609bna-miR171e8_......_375
MIMAT0005608bna-miR171d8_......_375
MIMAT0005607bna-miR171c8_......_375
MIMAT0005606bna-miR171b8_......_375
MIMAT0005605bna-miR171a8_......_375
MIMAT0005337rno-miR-760-3p1_......_675
MIMAT0005226smo-miR171d7_......_275
MIMAT0005223smo-miR171a8_......_375
MIMAT0004376ppt-miR171b8_......_375
MIMAT0004375ppt-miR171a7_......_275
MIMAT0011113mtr-miR171f8_......_375
MIMAT0004957hsa-miR-7601_......_675
MIMAT0004268ath-miR845a1_......_675
MIMAT0017259mmu-miR-505-5p7__......275
MIMAT0003898mmu-miR-760-3p1_......_675
MIMAT0017226rno-miR-505-5p7__......275
MIMAT0004776hsa-miR-505-5p7__......275
MIMAT0001984ptc-miR171b8_......_375
MIMAT0001983ptc-miR171a-3p8_......_375
MIMAT0001756sbi-miR171f8_......_375
MIMAT0001746zma-miR171h-3p8_......_375
MIMAT0001745zma-miR171k-3p8_......_375
MIMAT0001695zma-miR171f-3p8_......_375
MIMAT0001466sbi-miR171e8_......_375
MIMAT0001386zma-miR171b-3p8_......_375
MIMAT0001077osa-miR171h8_......_375
MIMAT0000921ath-miR171c-3p8_......_375
MIMAT0000920ath-miR171b-3p8_......_375
MIMAT0004695hsa-miR-337-5p3......__875