Result for your query miRNA sequence
>rcmv-miR-r111.2-5
acguugu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1acgttgt7
MIMAT0018319gma-miR4401a7.......1100
MIMAT0012073bta-miR-24812.......8100
MIMAT0036497tch-miR-1306-3p1......_685
MIMAT0035940chi-miR-1306-3p1......_685
MIMAT0035598dvi-miR-981-3p3_......885
MIMAT0035327gsa-miR-9391-3p3_......885
MIMAT0035287gsa-miR-76a-3p3_......885
MIMAT0035140efu-miR-93532_......785
MIMAT0033947atr-miR5358_......385
MIMAT0033670sma-miR-8474-3p3......_885
MIMAT0033508sma-miR-8404-5p3......_885
MIMAT0033415str-miR-76-3p3_......885
MIMAT0033088ppc-miR-76-3p3_......885
MIMAT0032756ssa-miR-8162-3p8_......385
MIMAT0032628ssa-miR-375-3-5p1......_685
MIMAT0032625ssa-miR-375-5p1......_685
MIMAT0032534ssa-miR-21a-3p8_......385
MIMAT0031824cpa-miR5358_......385
MIMAT0031567ppe-miR8583_......885
MIMAT0031514ppe-miR535a8_......385
MIMAT0030819prd-miR-76-3p3_......885
MIMAT0030487prd-miR-7871-3p3......_885
MIMAT0032221lva-miR-981-3p3_......885
MIMAT0032174pmi-miR-981-3p3_......885
MIMAT0029777cbn-miR-763_......885
MIMAT0029301mes-miR535b8_......385
MIMAT0029300mes-miR535a8_......385
MIMAT0028491mdo-miR-7262a-3p7_......285
MIMAT0028241mml-miR-1306-3p1......_685
MIMAT0026070mdm-miR8583_......885
MIMAT0026024mdm-miR535a8_......385
MIMAT0024999hme-miR-9813_......885
MIMAT0024929gma-miR63003_......885
MIMAT0024433mse-miR-9813_......885
MIMAT0024225ggo-miR-13061......_685
MIMAT0023753cgr-miR-1306-3p1......_685
MIMAT0023496hco-miR-763_......885
MIMAT0023255osa-miR812q1......_685
MIMAT0022417ath-miR858b3_......885
MIMAT0022027aca-miR-5410-5p1_......685
MIMAT0021471asu-miR-76-3p3_......885
MIMAT0020068spu-miR-9813_......885
MIMAT0020448tcc-miR5358_......385
MIMAT0019627pma-miR-45946......_185
MIMAT0019627pma-miR-45943......_885
MIMAT0018598ame-miR-37306_......185
MIMAT0018159pab-miR5358_......385
MIMAT0016637cin-miR-4074-3p6......_185
MIMAT0016427cin-miR-4000c-3p3_......885
MIMAT0016417cin-miR-375-5p1......_685
MIMAT0016226ppy-miR-13061......_685
MIMAT0017704aly-miR3436-3p8_......385
MIMAT0015536bmo-miR-33513......_885
MIMAT0015418bmo-miR-32358......_385
MIMAT0014736api-miR-9813_......885
MIMAT0014386cqu-miR-9813_......885
MIMAT0014267aae-miR-9813_......885
MIMAT0014205rco-miR5358_......385
MIMAT0013938ssc-miR-1306-3p1......_685
MIMAT0012675dpu-miR-9813_......885
MIMAT0012594aqc-miR5358_......385
MIMAT0012486dsi-miR-981-3p3_......885
MIMAT0012220dps-miR-981-3p3_......885
MIMAT0011525crm-miR-763_......885
MIMAT0011466cbr-miR-763_......885
MIMAT0011397sme-miR-76-3p3_......885
MIMAT0010121ame-miR-9813_......885
MIMAT0010098tca-miR-9813_......885
MIMAT0009601lgi-miR-9813_......885
MIMAT0009548cte-miR-9813_......885
MIMAT0009411mmu-miR-1306-3p1......_685
MIMAT0008023ptr-miR-13061......_685
MIMAT0011136xla-miR-13061......_685
MIMAT0007857aga-miR-9813_......885
MIMAT0007682gga-miR-1772-3p2_......785
MIMAT0007294mdv1-miR-M10-5p2_......785
MIMAT0005738vvi-miR535c8_......385
MIMAT0005736vvi-miR535b8_......385
MIMAT0005735vvi-miR535a8_......385
MIMAT0005950hsa-miR-1306-3p1......_685
MIMAT0005497dme-miR-981-3p3_......885
MIMAT0003915ppt-miR535d8_......385
MIMAT0003142osa-miR535-5p8_......385
MIMAT0003141ppt-miR535c8_......385
MIMAT0003140ppt-miR535b8_......385
MIMAT0003139ppt-miR535a8_......385
MIMAT0000048cel-miR-76-3p3_......885