RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | agcactca | 8 | ||
MIMAT0001572 | mghv-miR-M1-8-5p | 1 | ........ | 8 | 100 |
MIMAT0033712 | pxy-miR-8501 | 8 | _....... | 2 | 87 |
MIMAT0032958 | ppc-miR-8247-5p | 7 | _....... | 1 | 87 |
MIMAT0028346 | mml-miR-7193-5p | 7 | ......._ | 1 | 87 |
MIMAT0025997 | mdm-miR397b | 8 | _....... | 2 | 87 |
MIMAT0025996 | mdm-miR397a | 8 | _....... | 2 | 87 |
MIMAT0028024 | mmu-miR-7060-5p | 8 | _....... | 2 | 87 |
MIMAT0018063 | dme-miR-3645-5p | 8 | _....... | 2 | 87 |
MIMAT0016388 | gga-miR-3537 | 8 | _....... | 2 | 87 |
MIMAT0013601 | bmo-miR-11-5p | 2 | ......._ | 8 | 87 |
MIMAT0007882 | hsa-miR-1909-5p | 7 | _....... | 1 | 87 |
MIMAT0037110 | ata-miR2275a-5p | 8 | .a...... | 1 | 87 |
MIMAT0036323 | ocu-miR-302d-3p | 8 | ......t. | 1 | 87 |
MIMAT0036321 | ocu-miR-302a-3p | 8 | ......t. | 1 | 87 |
MIMAT0036319 | ocu-miR-302c-3p | 8 | ......t. | 1 | 87 |
MIMAT0036317 | ocu-miR-302b-3p | 8 | ......t. | 1 | 87 |
MIMAT0034820 | efu-miR-9223b | 8 | .t...... | 1 | 87 |
MIMAT0032636 | ssa-miR-430c-3p | 8 | ......t. | 1 | 87 |
MIMAT0032632 | ssa-miR-430a-3p | 8 | ......t. | 1 | 87 |
MIMAT0030363 | hhi-miR-430b | 8 | ......t. | 1 | 87 |
MIMAT0030341 | hhi-miR-430a | 8 | ......t. | 1 | 87 |
MIMAT0026298 | ccr-miR-430 | 8 | ......t. | 1 | 87 |
MIMAT0021919 | aca-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0019916 | hsa-miR-4765 | 8 | .t...... | 1 | 87 |
MIMAT0019552 | pma-miR-430e | 8 | ......t. | 1 | 87 |
MIMAT0019548 | pma-miR-430a | 8 | ......t. | 1 | 87 |
MIMAT0019538 | pma-miR-302 | 8 | ......t. | 1 | 87 |
MIMAT0018080 | hsa-miR-3659 | 8 | .a...... | 1 | 87 |
MIMAT0015819 | ppy-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0015818 | ppy-miR-302c | 8 | ......t. | 1 | 87 |
MIMAT0015817 | ppy-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0013807 | ola-miR-430d | 8 | ......t. | 1 | 87 |
MIMAT0013806 | ola-miR-430b | 8 | ......t. | 1 | 87 |
MIMAT0013805 | ola-miR-430c | 8 | ......t. | 1 | 87 |
MIMAT0013804 | ola-miR-430a | 8 | ......t. | 1 | 87 |
MIMAT0012914 | eca-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0012913 | eca-miR-302c | 8 | ......t. | 1 | 87 |
MIMAT0012912 | eca-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0012911 | eca-miR-302a | 8 | ......t. | 1 | 87 |
MIMAT0009281 | bta-miR-302c | 8 | ......t. | 1 | 87 |
MIMAT0009280 | bta-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0009279 | bta-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0008090 | ptr-miR-302e | 8 | ......t. | 1 | 87 |
MIMAT0008089 | ptr-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0008088 | ptr-miR-302c | 8 | ......t. | 1 | 87 |
MIMAT0008087 | ptr-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0008086 | ptr-miR-302a | 8 | ......t. | 1 | 87 |
MIMAT0006262 | mml-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0006261 | mml-miR-302c | 8 | ......t. | 1 | 87 |
MIMAT0006260 | mml-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0006259 | mml-miR-302a-3p | 8 | ......t. | 1 | 87 |
MIMAT0007195 | oan-miR-302-3p | 8 | ......t. | 1 | 87 |
MIMAT0005931 | hsa-miR-302e | 8 | ......t. | 1 | 87 |
MIMAT0004183 | mdo-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0004182 | mdo-miR-302a | 8 | ......t. | 1 | 87 |
MIMAT0004181 | mdo-miR-302c | 8 | ......t. | 1 | 87 |
MIMAT0004180 | mdo-miR-302b | 8 | ......t. | 1 | 87 |
MIMAT0003709 | xtr-miR-428a | 8 | ......t. | 1 | 87 |
MIMAT0003636 | xtr-miR-302 | 8 | ......t. | 1 | 87 |
MIMAT0003377 | mmu-miR-302d-3p | 8 | ......t. | 1 | 87 |
MIMAT0003374 | mmu-miR-302b-3p | 8 | ......t. | 1 | 87 |
MIMAT0003360 | gga-miR-302d | 8 | ......t. | 1 | 87 |
MIMAT0003359 | gga-miR-302c-3p | 8 | ......t. | 1 | 87 |
MIMAT0003357 | gga-miR-302b-3p | 8 | ......t. | 1 | 87 |
MIMAT0001880 | dre-miR-430i-3p | 8 | ......t. | 1 | 87 |
MIMAT0001425 | dre-miR-430c-3p | 8 | ......t. | 1 | 87 |
MIMAT0001423 | dre-miR-430a-3p | 8 | ......t. | 1 | 87 |
MIMAT0001345 | xla-miR-428 | 8 | ......t. | 1 | 87 |
MIMAT0000718 | hsa-miR-302d-3p | 8 | ......t. | 1 | 87 |
MIMAT0000717 | hsa-miR-302c-3p | 8 | ......t. | 1 | 87 |
MIMAT0000715 | hsa-miR-302b-3p | 8 | ......t. | 1 | 87 |
MIMAT0000684 | hsa-miR-302a-3p | 8 | ......t. | 1 | 87 |
MIMAT0000380 | mmu-miR-302a-3p | 8 | ......t. | 1 | 87 |
MIMAT0036805 | oha-miR-20b-5p | 8 | ......__ | 3 | 75 |
MIMAT0036459 | mmu-miR-9768-5p | 3 | _......_ | 8 | 75 |
MIMAT0036418 | ggo-miR-519b | 7 | ......__ | 2 | 75 |
MIMAT0036409 | ggo-miR-520f | 7 | ......__ | 2 | 75 |
MIMAT0036406 | ggo-miR-515-3p | 6 | _......_ | 1 | 75 |
MIMAT0036329 | ocu-miR-520e | 8 | ......__ | 3 | 75 |
MIMAT0036326 | ocu-miR-294-3p | 8 | ......__ | 3 | 75 |
MIMAT0035244 | gsa-miR-279-5p | 8 | __...... | 3 | 75 |
MIMAT0035143 | efu-miR-9186j | 6 | __...... | 1 | 75 |
MIMAT0034693 | eca-miR-9141 | 8 | __...... | 3 | 75 |
MIMAT0034639 | eca-miR-372 | 8 | ......__ | 3 | 75 |
MIMAT0034618 | eca-miR-9073 | 6 | __...... | 1 | 75 |
MIMAT0034603 | eca-miR-3548 | 2 | ......__ | 7 | 75 |
MIMAT0034576 | eca-miR-9034 | 2 | __...... | 7 | 75 |
MIMAT0034451 | eca-miR-8923 | 3 | _......_ | 8 | 75 |
MIMAT0034153 | gra-miR8741 | 2 | ......__ | 7 | 75 |
MIMAT0033862 | atr-miR8578.2 | 8 | __...... | 3 | 75 |
MIMAT0033819 | pxy-miR-279b-5p | 8 | __...... | 3 | 75 |
MIMAT0033786 | pxy-miR-283 | 8 | _......_ | 3 | 75 |
MIMAT0032911 | ppc-miR-8364d-3p | 8 | _......_ | 3 | 75 |
MIMAT0032807 | cel-miR-8197-5p | 6 | ......__ | 1 | 75 |
MIMAT0032747 | ssa-miR-8160-3p | 3 | ......__ | 8 | 75 |
MIMAT0032634 | ssa-miR-430b-3p | 8 | ......__ | 3 | 75 |
MIMAT0031341 | stu-miR397-5p | 8 | __...... | 3 | 75 |
MIMAT0030679 | prd-miR-7919-3p | 2 | ......__ | 7 | 75 |
MIMAT0030301 | bdi-miR7775-3p | 8 | ......__ | 3 | 75 |
MIMAT0030065 | bdi-miR397b-5p | 8 | __...... | 3 | 75 |
MIMAT0030018 | hsa-miR-7703 | 3 | _......_ | 8 | 75 |
MIMAT0029903 | mmu-miR-7687-3p | 2 | __...... | 7 | 75 |
MIMAT0029279 | mes-miR397 | 8 | __...... | 3 | 75 |
MIMAT0029049 | gga-miR-7447-3p | 3 | ......__ | 8 | 75 |
MIMAT0028590 | mdo-miR-7299-5p | 7 | ......__ | 2 | 75 |
MIMAT0028342 | mml-miR-7192-5p | 2 | __...... | 7 | 75 |
MIMAT0028288 | mml-miR-6790-5p | 8 | __...... | 3 | 75 |
MIMAT0027812 | mmu-miR-6956-5p | 6 | __...... | 1 | 75 |
MIMAT0027480 | hsa-miR-6790-5p | 7 | __...... | 2 | 75 |
MIMAT0025755 | gga-miR-6654-3p | 3 | ......__ | 8 | 75 |
MIMAT0025703 | gga-miR-6608-3p | 1 | ......__ | 6 | 75 |
MIMAT0025664 | gga-miR-6578-3p | 3 | _......_ | 8 | 75 |
MIMAT0025308 | prv-miR-LLT5 | 6 | __...... | 1 | 75 |
MIMAT0025100 | mmu-miR-6357 | 2 | ......__ | 7 | 75 |
MIMAT0025088 | mmu-miR-6345 | 2 | ......__ | 7 | 75 |
MIMAT0024806 | hvu-miR6182 | 6 | __...... | 1 | 75 |
MIMAT0024750 | nta-miR6151i | 6 | __...... | 1 | 75 |
MIMAT0024749 | nta-miR6151h | 6 | __...... | 1 | 75 |
MIMAT0024748 | nta-miR6151g | 6 | __...... | 1 | 75 |
MIMAT0024747 | nta-miR6151f | 6 | __...... | 1 | 75 |
MIMAT0024711 | nta-miR397 | 8 | __...... | 3 | 75 |
MIMAT0027269 | pgi-miR6143b-3p | 2 | ......__ | 7 | 75 |
MIMAT0027170 | lus-miR397a | 8 | __...... | 3 | 75 |
MIMAT0024577 | bta-miR-574 | 6 | __...... | 1 | 75 |
MIMAT0024000 | cgr-miR-702 | 7 | __...... | 2 | 75 |
MIMAT0023748 | cgr-miR-1285 | 2 | _......_ | 7 | 75 |
MIMAT0031162 | stu-miR482d-5p | 8 | __...... | 3 | 75 |
MIMAT0023408 | hco-miR-5927 | 3 | __...... | 8 | 75 |
MIMAT0023406 | hco-miR-5926 | 3 | _......_ | 8 | 75 |
MIMAT0022040 | aca-miR-5420 | 8 | ......__ | 3 | 75 |
MIMAT0022010 | aca-miR-5400 | 3 | ......__ | 8 | 75 |
MIMAT0021441 | asu-miR-36b-5p | 8 | __...... | 3 | 75 |
MIMAT0021147 | mtr-miR5213-3p | 8 | _......_ | 3 | 75 |
MIMAT0020507 | dme-miR-4914-5p | 7 | __...... | 2 | 75 |
MIMAT0019903 | hsa-miR-4758-5p | 7 | __...... | 2 | 75 |
MIMAT0019878 | hsa-miR-4745-5p | 6 | __...... | 1 | 75 |
MIMAT0019725 | hsa-miR-4658 | 7 | __...... | 2 | 75 |
MIMAT0019551 | pma-miR-430d | 8 | ......__ | 3 | 75 |
MIMAT0019550 | pma-miR-430c | 8 | ......__ | 3 | 75 |
MIMAT0019541 | pma-miR-430f | 8 | ......__ | 3 | 75 |
MIMAT0019000 | hsa-miR-4473 | 8 | ......__ | 3 | 75 |
MIMAT0018792 | tca-miR-3860-5p | 2 | ......__ | 7 | 75 |
MIMAT0018061 | dme-miR-3644-5p | 7 | __...... | 2 | 75 |
MIMAT0018057 | dme-miR-3642-5p | 7 | __...... | 2 | 75 |
MIMAT0018055 | dme-miR-3641-5p | 7 | __...... | 2 | 75 |
MIMAT0016773 | cin-miR-4165-3p | 6 | __...... | 1 | 75 |
MIMAT0016415 | cin-miR-367-5p | 6 | ......__ | 1 | 75 |
MIMAT0017884 | rno-miR-702-5p | 7 | __...... | 2 | 75 |
MIMAT0017806 | rno-miR-3548 | 2 | ......__ | 7 | 75 |
MIMAT0015974 | ppy-miR-520f | 7 | ......__ | 2 | 75 |
MIMAT0015973 | ppy-miR-520e | 8 | ......__ | 3 | 75 |
MIMAT0015972 | ppy-miR-520d-3p | 8 | ......__ | 3 | 75 |
MIMAT0015970 | ppy-miR-520c-3p | 8 | ......__ | 3 | 75 |
MIMAT0015968 | ppy-miR-520b | 8 | ......__ | 3 | 75 |
MIMAT0015967 | ppy-miR-520a-3p | 8 | ......__ | 3 | 75 |
MIMAT0015944 | ppy-miR-515-3p | 6 | _......_ | 1 | 75 |
MIMAT0015937 | ppy-miR-512-3p | 7 | ......__ | 2 | 75 |
MIMAT0015861 | ppy-miR-373 | 8 | ......__ | 3 | 75 |
MIMAT0015860 | ppy-miR-372 | 8 | ......__ | 3 | 75 |
MIMAT0017730 | aly-miR3447-3p | 8 | __...... | 3 | 75 |
MIMAT0014952 | mmu-miR-3110-3p | 1 | _......_ | 6 | 75 |
MIMAT0014933 | mmu-miR-3102-5p | 7 | __...... | 2 | 75 |
MIMAT0014861 | mmu-miR-3076-3p | 2 | _......_ | 7 | 75 |
MIMAT0014826 | mmu-miR-3060-5p | 8 | _......_ | 3 | 75 |
MIMAT0014490 | tgu-miR-2980 | 3 | ......__ | 8 | 75 |
MIMAT0013859 | bta-miR-2901 | 8 | _......_ | 3 | 75 |
MIMAT0017366 | rno-miR-295-3p | 7 | ......__ | 2 | 75 |
MIMAT0012846 | rno-miR-201-5p | 1 | __...... | 6 | 75 |
MIMAT0012825 | rno-miR-105 | 8 | ......__ | 3 | 75 |
MIMAT0013606 | bmo-miR-279d-5p | 8 | __...... | 3 | 75 |
MIMAT0012412 | dps-miR-2571-5p | 7 | __...... | 2 | 75 |
MIMAT0012372 | dps-miR-2555-5p | 7 | __...... | 2 | 75 |
MIMAT0012352 | dps-miR-2546-5p | 7 | __...... | 2 | 75 |
MIMAT0012194 | dme-miR-307b-5p | 2 | __...... | 7 | 75 |
MIMAT0011932 | bta-miR-2383 | 7 | __...... | 2 | 75 |
MIMAT0019173 | bfl-miR-2072-3p | 3 | ......__ | 8 | 75 |
MIMAT0009615 | sko-miR-33-3p | 7 | ......__ | 2 | 75 |
MIMAT0009433 | mmu-miR-1960 | 8 | ......__ | 3 | 75 |
MIMAT0009278 | bta-miR-302a | 7 | ......__ | 2 | 75 |
MIMAT0032047 | dvi-miR-279-5p | 8 | __...... | 3 | 75 |
MIMAT0008202 | ptr-miR-520f | 7 | ......__ | 2 | 75 |
MIMAT0008201 | ptr-miR-520e | 8 | ......__ | 3 | 75 |
MIMAT0008200 | ptr-miR-520d | 8 | ......__ | 3 | 75 |
MIMAT0008198 | ptr-miR-520b | 8 | ......__ | 3 | 75 |
MIMAT0008197 | ptr-miR-520a | 8 | ......__ | 3 | 75 |
MIMAT0008181 | ptr-miR-515 | 6 | _......_ | 1 | 75 |
MIMAT0008180 | ptr-miR-512 | 7 | ......__ | 2 | 75 |
MIMAT0008122 | ptr-miR-372 | 8 | ......__ | 3 | 75 |
MIMAT0007928 | sly-miR397 | 8 | __...... | 3 | 75 |
MIMAT0007777 | osa-miR1855 | 1 | ......__ | 6 | 75 |
MIMAT0006749 | cfa-miR-106a | 8 | ......__ | 3 | 75 |
MIMAT0006388 | mml-miR-520a-3p | 8 | ......__ | 3 | 75 |
MIMAT0006384 | mml-miR-519a-3p | 8 | ......__ | 3 | 75 |
MIMAT0006378 | mml-miR-518a-3p | 8 | ......__ | 3 | 75 |
MIMAT0006372 | mml-miR-512-3p | 7 | ......__ | 2 | 75 |
MIMAT0006371 | mml-miR-512-5p | 1 | __...... | 6 | 75 |
MIMAT0006299 | mml-miR-373 | 8 | ......__ | 3 | 75 |
MIMAT0006298 | mml-miR-372-3p | 8 | ......__ | 3 | 75 |
MIMAT0007640 | gga-miR-1737 | 2 | ......__ | 7 | 75 |
MIMAT0007320 | oan-miR-1419f-5p | 6 | ......__ | 1 | 75 |
MIMAT0007253 | oan-miR-1419d-5p | 8 | ......__ | 3 | 75 |
MIMAT0007240 | oan-miR-1419b-5p | 6 | ......__ | 1 | 75 |
MIMAT0007110 | oan-miR-1378 | 8 | ......__ | 3 | 75 |
MIMAT0006926 | oan-miR-1420c-3p | 8 | ......__ | 3 | 75 |
MIMAT0006923 | oan-miR-1420a-3p | 8 | ......__ | 3 | 75 |
MIMAT0022947 | hsa-miR-1238-5p | 7 | __...... | 2 | 75 |
MIMAT0022945 | hsa-miR-1236-5p | 6 | __...... | 1 | 75 |
MIMAT0005399 | cre-miR1153-5p.2 | 6 | ......__ | 1 | 75 |
MIMAT0005275 | smo-miR1103-5p | 8 | _......_ | 3 | 75 |
MIMAT0005158 | ppt-miR1045 | 7 | ......__ | 2 | 75 |
MIMAT0004893 | mmu-miR-574-5p | 6 | __...... | 1 | 75 |
MIMAT0004178 | mdo-miR-93-5p | 8 | ......__ | 3 | 75 |
MIMAT0003660 | xtr-miR-93b | 7 | ......__ | 2 | 75 |
MIMAT0003659 | xtr-miR-93a | 8 | ......__ | 3 | 75 |
MIMAT0022931 | mmu-miR-702-5p | 7 | __...... | 2 | 75 |
MIMAT0003376 | mmu-miR-302c-3p | 7 | ......__ | 2 | 75 |
MIMAT0004795 | hsa-miR-574-5p | 6 | __...... | 1 | 75 |
MIMAT0026612 | hsa-miR-504-3p | 8 | _......_ | 3 | 75 |
MIMAT0002856 | hsa-miR-520d-3p | 8 | ......__ | 3 | 75 |
MIMAT0002846 | hsa-miR-520c-3p | 8 | ......__ | 3 | 75 |
MIMAT0002843 | hsa-miR-520b | 8 | ......__ | 3 | 75 |
MIMAT0002834 | hsa-miR-520a-3p | 8 | ......__ | 3 | 75 |
MIMAT0002830 | hsa-miR-520f-3p | 7 | ......__ | 2 | 75 |
MIMAT0002827 | hsa-miR-515-3p | 6 | _......_ | 1 | 75 |
MIMAT0002825 | hsa-miR-520e | 8 | ......__ | 3 | 75 |
MIMAT0002823 | hsa-miR-512-3p | 7 | ......__ | 2 | 75 |
MIMAT0002822 | hsa-miR-512-5p | 1 | __...... | 6 | 75 |
MIMAT0002781 | mne-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002778 | lla-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002776 | sla-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002773 | mml-miR-93-5p | 8 | ......__ | 3 | 75 |
MIMAT0002770 | ptr-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002767 | ppy-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002764 | ppa-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002762 | age-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0002759 | ggo-miR-93 | 8 | ......__ | 3 | 75 |
MIMAT0001424 | dre-miR-430b-3p | 8 | ......__ | 3 | 75 |
MIMAT0001344 | xla-miR-427 | 8 | ......__ | 3 | 75 |
MIMAT0001143 | gga-miR-302a | 7 | ......__ | 2 | 75 |
MIMAT0000895 | rno-miR-291a-3p | 8 | ......__ | 3 | 75 |
MIMAT0026485 | hsa-miR-383-3p | 3 | ......__ | 8 | 75 |
MIMAT0000726 | hsa-miR-373-3p | 8 | ......__ | 3 | 75 |
MIMAT0000724 | hsa-miR-372-3p | 8 | ......__ | 3 | 75 |
MIMAT0000373 | mmu-miR-295-3p | 8 | ......__ | 3 | 75 |
MIMAT0000372 | mmu-miR-294-3p | 8 | ......__ | 3 | 75 |
MIMAT0000368 | mmu-miR-291a-3p | 8 | ......__ | 3 | 75 |