VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>dev-miR-d9-3p
aguccag

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`agtccag`	7
MIMAT0037082	ssc-miR-378b-3p	8	`.......`	2	100
MIMAT0036972	bta-miR-378d	7	`.......`	1	100
MIMAT0036533	tch-miR-378a-3p	8	`.......`	2	100
MIMAT0036194	chi-miR-378-3p	8	`.......`	2	100
MIMAT0035735	rno-miR-1956-5p	1	`.......`	7	100
MIMAT0034317	cfa-miR-8826	8	`.......`	2	100
MIMAT0030985	hsa-miR-8058	7	`.......`	1	100
MIMAT0029797	mmu-miR-7647-3p	2	`.......`	8	100
MIMAT0028563	mdo-miR-7290-3p	8	`.......`	2	100
MIMAT0028181	dev-miR-D9-3p	2	`.......`	8	100
MIMAT0025551	bta-miR-378c	8	`.......`	2	100
MIMAT0025138	mmu-miR-378c	8	`.......`	2	100
MIMAT0024409	ppy-miR-378e	8	`.......`	2	100
MIMAT0024364	ppy-miR-378b	8	`.......`	2	100
MIMAT0024360	ppy-miR-378d	8	`.......`	2	100
MIMAT0024313	mml-miR-378d	8	`.......`	2	100
MIMAT0024303	ggo-miR-378e	8	`.......`	2	100
MIMAT0024242	ggo-miR-378b	8	`.......`	2	100
MIMAT0024103	ggo-miR-378a	8	`.......`	2	100
MIMAT0024067	ptr-miR-378e	8	`.......`	2	100
MIMAT0024044	ptr-miR-378b	8	`.......`	2	100
MIMAT0023944	cgr-miR-378-3p	8	`.......`	2	100
MIMAT0023830	cgr-miR-1956	1	`.......`	7	100
MIMAT0023266	osa-miR5798	7	`.......`	1	100
MIMAT0019348	mmu-miR-378b	7	`.......`	1	100
MIMAT0019074	hsa-miR-378i	8	`.......`	2	100
MIMAT0019059	hsa-miR-1269b	7	`.......`	1	100
MIMAT0018984	hsa-miR-378h	8	`.......`	2	100
MIMAT0018932	hsa-miR-378f	8	`.......`	2	100
MIMAT0018927	hsa-miR-378e	8	`.......`	2	100
MIMAT0016847	hsa-miR-378c	8	`.......`	2	100
MIMAT0016193	ppy-miR-1269	7	`.......`	1	100
MIMAT0015881	ppy-miR-422a	8	`.......`	2	100
MIMAT0015868	ppy-miR-378a	8	`.......`	2	100
MIMAT0014999	hsa-miR-378b	8	`.......`	2	100
MIMAT0013868	ssc-miR-378	8	`.......`	2	100
MIMAT0013068	eca-miR-378	8	`.......`	2	100
MIMAT0009428	mmu-miR-1956	1	`.......`	7	100
MIMAT0009305	bta-miR-378	8	`.......`	2	100
MIMAT0008141	ptr-miR-422a	8	`.......`	2	100
MIMAT0008130	ptr-miR-378a	8	`.......`	2	100
MIMAT0006683	cfa-miR-378	8	`.......`	2	100
MIMAT0006320	mml-miR-422a	8	`.......`	2	100
MIMAT0006307	mml-miR-378a	8	`.......`	2	100
MIMAT0007024	oan-miR-1362-3p	2	`.......`	8	100
MIMAT0006895	oan-miR-1422k-5p	2	`.......`	8	100
MIMAT0005923	hsa-miR-1269a	7	`.......`	1	100
MIMAT0018926	hsa-miR-378d	8	`.......`	2	100
MIMAT0003379	rno-miR-378a-3p	8	`.......`	2	100
MIMAT0001339	hsa-miR-422a	8	`.......`	2	100
MIMAT0003151	mmu-miR-378a-3p	8	`.......`	2	100
MIMAT0000732	hsa-miR-378a-3p	8	`.......`	2	100
MIMAT0036932	oha-miR-455-3p	3	`......_`	8	85
MIMAT0036727	oha-miR-145-5p	1	`_......`	6	85
MIMAT0036608	tch-miR-455-3p	3	`......_`	8	85
MIMAT0036398	gma-miR319q	6	`......_`	1	85
MIMAT0036377	gma-miR319o	6	`......_`	1	85
MIMAT0036242	chi-miR-455-3p	3	`......_`	8	85
MIMAT0035967	chi-miR-145-5p	1	`_......`	6	85
MIMAT0035416	nve-miR-9455	1	`_......`	6	85
MIMAT0035366	bol-miR9411	8	`_......`	3	85
MIMAT0035122	efu-miR-145	1	`_......`	6	85
MIMAT0034813	efu-miR-378	8	`_......`	3	85
MIMAT0034675	eca-miR-9124	6	`......_`	1	85
MIMAT0034672	eca-miR-9122	8	`_......`	3	85
MIMAT0034185	gra-miR8756	6	`......_`	1	85
MIMAT0033932	atr-miR319e	8	`......_`	3	85
MIMAT0033931	atr-miR319d	8	`......_`	3	85
MIMAT0033929	atr-miR319b	8	`......_`	3	85
MIMAT0033319	str-miR-7880e-5p	6	`......_`	1	85
MIMAT0032644	ssa-miR-455-3p	3	`......_`	8	85
MIMAT0032369	ssa-miR-145-5p	1	`_......`	6	85
MIMAT0031782	cpa-miR319	8	`......_`	3	85
MIMAT0030564	prd-miR-7891-5p	3	`......_`	8	85
MIMAT0032226	lva-miR-2005-5p	1	`......_`	6	85
MIMAT0032178	pmi-miR-2005-5p	1	`......_`	6	85
MIMAT0029422	ipu-miR-145	1	`_......`	6	85
MIMAT0029260	mes-miR319h	8	`......_`	3	85
MIMAT0029009	oan-miR-7429-3p	8	`......_`	3	85
MIMAT0028946	oan-miR-7402-5p	6	`......_`	1	85
MIMAT0028493	mdo-miR-7263-3p	6	`......_`	1	85
MIMAT0027962	mmu-miR-7029-5p	7	`_......`	2	85
MIMAT0025276	ptc-miR477d-3p	6	`......_`	1	85
MIMAT0025105	mmu-miR-145b	1	`_......`	6	85
MIMAT0025050	rno-miR-6315	7	`_......`	2	85
MIMAT0024855	rno-miR-378b	8	`......_`	3	85
MIMAT0024775	nta-miR6161b	7	`_......`	2	85
MIMAT0024774	nta-miR6161a	7	`_......`	2	85
MIMAT0024560	cca-miR6115	7	`_......`	2	85
MIMAT0024392	ppy-miR-4529	8	`......_`	3	85
MIMAT0024222	ggo-miR-455	3	`......_`	8	85
MIMAT0023965	cgr-miR-455-3p	3	`......_`	8	85
MIMAT0023184	gma-miR5779	3	`......_`	8	85
MIMAT0022754	vun-miR319b	8	`......_`	3	85
MIMAT0022074	aca-miR-5451	6	`......_`	1	85
MIMAT0021965	aca-miR-455-3p	3	`......_`	8	85
MIMAT0021773	aca-miR-145-5p	1	`_......`	6	85
MIMAT0021418	asu-let-7-3p	3	`_......`	8	85
MIMAT0020634	mmu-miR-5124a	2	`_......`	7	85
MIMAT0020992	gma-miR319d	6	`......_`	1	85
MIMAT0020418	tcc-miR319	8	`......_`	3	85
MIMAT0019696	hsa-miR-4638-3p	7	`_......`	2	85
MIMAT0019595	pma-miR-4563	8	`_......`	3	85
MIMAT0019476	pma-miR-145-5p	1	`_......`	6	85
MIMAT0019068	hsa-miR-4529-3p	8	`......_`	3	85
MIMAT0018459	csi-miR319	8	`......_`	3	85
MIMAT0018309	gma-miR4394	8	`......_`	3	85
MIMAT0018119	hsa-miR-3690	8	`_......`	3	85
MIMAT0018074	hsa-miR-3654	8	`_......`	3	85
MIMAT0016063	ppy-miR-622	3	`......_`	8	85
MIMAT0015900	ppy-miR-455-3p	3	`......_`	8	85
MIMAT0014465	tgu-miR-146a-3p	1	`......_`	6	85
MIMAT0013960	ssc-miR-455-3p	3	`......_`	8	85
MIMAT0013064	eca-miR-145	1	`_......`	6	85
MIMAT0012552	aqc-miR159	8	`......_`	3	85
MIMAT0012424	dsi-miR-978a	2	`_......`	7	85
MIMAT0012418	dps-miR-2574a-5p	6	`......_`	1	85
MIMAT0011501	cbr-miR-74b-5p	6	`......_`	1	85
MIMAT0019180	tca-miR-263a-3p	8	`......_`	3	85
MIMAT0009863	cfa-miR-145	1	`_......`	6	85
MIMAT0009746	spu-miR-2005	1	`......_`	6	85
MIMAT0009145	sly-miR319a	8	`......_`	3	85
MIMAT0008157	ptr-miR-455	3	`......_`	8	85
MIMAT0008006	ptr-miR-1288	6	`......_`	1	85
MIMAT0007902	bmo-miR-184-3p	7	`_......`	2	85
MIMAT0006556	vvi-miR319e	8	`......_`	3	85
MIMAT0006340	mml-miR-455-3p	3	`......_`	8	85
MIMAT0007736	gga-miR-146c-3p	1	`......_`	6	85
MIMAT0007141	oan-miR-145-5p	1	`_......`	6	85
MIMAT0005942	hsa-miR-1288-3p	6	`......_`	1	85
MIMAT0017308	rno-miR-455-3p	3	`......_`	8	85
MIMAT0005498	dme-miR-982-5p	8	`_......`	3	85
MIMAT0005494	dme-miR-978-3p	2	`_......`	7	85
MIMAT0004354	ppt-miR319e	8	`......_`	3	85
MIMAT0004116	mdo-miR-145-5p	1	`_......`	6	85
MIMAT0003836	bta-miR-455-3p	3	`......_`	8	85
MIMAT0003688	xtr-miR-145	1	`_......`	6	85
MIMAT0003542	bta-miR-145	1	`_......`	6	85
MIMAT0003742	mmu-miR-455-3p	3	`......_`	8	85
MIMAT0004816	ebv-miR-BART9-5p	8	`_......`	3	85
MIMAT0004815	ebv-miR-BART7-5p	7	`_......`	2	85
MIMAT0004784	hsa-miR-455-3p	3	`......_`	8	85
MIMAT0003136	ppt-miR319d-3p	8	`......_`	3	85
MIMAT0003135	ppt-miR319c	8	`......_`	3	85
MIMAT0003134	ppt-miR319b	8	`......_`	3	85
MIMAT0003133	ppt-miR319a	8	`......_`	3	85
MIMAT0002613	mne-miR-198	2	`_......`	7	85
MIMAT0002612	lla-miR-198	2	`_......`	7	85
MIMAT0002611	sla-miR-198	2	`_......`	7	85
MIMAT0002610	mml-miR-198	2	`_......`	7	85
MIMAT0002609	ptr-miR-198	2	`_......`	7	85
MIMAT0002608	ppy-miR-198	2	`_......`	7	85
MIMAT0002607	ppa-miR-198	2	`_......`	7	85
MIMAT0002606	age-miR-198	2	`_......`	7	85
MIMAT0002605	ggo-miR-198	2	`_......`	7	85
MIMAT0002270	mne-miR-145	1	`_......`	6	85
MIMAT0002269	ppy-miR-145	1	`_......`	6	85
MIMAT0002268	ggo-miR-145	1	`_......`	6	85
MIMAT0002267	ptr-miR-145	1	`_......`	6	85
MIMAT0002266	mml-miR-145-5p	1	`_......`	6	85
MIMAT0002123	ssc-miR-145-5p	1	`_......`	6	85
MIMAT0001842	dre-miR-145-5p	1	`_......`	6	85
MIMAT0000851	rno-miR-145-5p	1	`_......`	6	85
MIMAT0000437	hsa-miR-145-5p	1	`_......`	6	85
MIMAT0000228	hsa-miR-198	2	`_......`	7	85
MIMAT0000157	mmu-miR-145a-5p	1	`_......`	6	85
MIMAT0020319	cel-miR-73-5p	6	`......_`	1	85