Result for your query miRNA sequence
>rrv-miR-rr1-15-3p
aguguug

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1agtgttg7
MIMAT0037226ata-miR2275c-5p1.......7100
MIMAT0036269chi-miR-505-3p8.......2100
MIMAT0030572prd-miR-5358b-5p2.......8100
MIMAT0025103mmu-miR-63602.......8100
MIMAT0023191gma-miR57852.......8100
MIMAT0017895rno-miR-35922.......8100
MIMAT0013961ssc-miR-5058.......2100
MIMAT0026760oan-miR-1398-3p1.......7100
MIMAT0004477mdv2-miR-M30-5p7.......1100
MIMAT0002179kshv-miR-K12-10a-3p2.......8100
MIMAT0037110ata-miR2275a-5p3......_885
MIMAT0036470tch-miR-1423......_885
MIMAT0036383gma-miR9746i3......_885
MIMAT0036373gma-miR9746h3......_885
MIMAT0036372gma-miR9746g3......_885
MIMAT0036371gma-miR9746f3......_885
MIMAT0036370gma-miR9746e3......_885
MIMAT0036369gma-miR9746d3......_885
MIMAT0036368gma-miR9746c3......_885
MIMAT0036367gma-miR9746b3......_885
MIMAT0036366gma-miR9746a3......_885
MIMAT0036362gma-miR97422_......785
MIMAT0034735eca-miR-91583......_885
MIMAT0034544eca-miR-90043......_885
MIMAT0034477eca-miR-89483_......885
MIMAT0034273psj-miR8788b-3p1_......685
MIMAT0034271psj-miR8788a-3p1_......685
MIMAT0033525sma-miR-8410-3p1......_685
MIMAT0032781ath-miR81823_......885
MIMAT0032362ssa-miR-142a-3p1......_685
MIMAT0031577bbe-miR-124-5p1......_685
MIMAT0030733prd-miR-7937-3p6......_185
MIMAT0030042oar-miR-200a6......_185
MIMAT0029419ipu-miR-1423......_885
MIMAT0029043gga-miR-7444-3p1......_685
MIMAT0028750mdo-miR-1545b-5p1......_685
MIMAT0028663mdo-miR-505-3p8_......385
MIMAT0031066mdo-miR-199b-3-5p3......_885
MIMAT0031065mdo-miR-199b-2-5p3......_885
MIMAT0028425mmu-miR-7228-3p1......_685
MIMAT0028271mml-miR-7168-3p1......_685
MIMAT0026223ccr-miR-142-3p3......_885
MIMAT0027415hsa-miR-6757-3p6......_185
MIMAT0025627gga-miR-6560-5p2_......785
MIMAT0025614gga-miR-6553-3p6......_185
MIMAT0024228ggo-miR-5058_......385
MIMAT0023980cgr-miR-505-3p8_......385
MIMAT0023771cgr-miR-142-3p3......_885
MIMAT0023403hco-miR-5924a-5p6_......185
MIMAT0022571ola-miR-200a6......_185
MIMAT0020202dme-miR-4973-3p8_......385
MIMAT0020033sko-miR-4826-3p8_......385
MIMAT0018229gma-miR43412_......785
MIMAT0018080hsa-miR-36593......_885
MIMAT0016937bta-miR-36021_......685
MIMAT0016737cin-miR-4139-3p3......_885
MIMAT0016713cin-miR-4121-3p1_......685
MIMAT0016670cin-miR-4092-5p2_......785
MIMAT0016611cin-miR-4061-3p6......_185
MIMAT0017883rno-miR-35876......_185
MIMAT0016086ppy-miR-6531_......685
MIMAT0016050ppy-miR-6093......_885
MIMAT0026999tgu-miR-142-3p3......_885
MIMAT0017389tgu-miR-338-5p6......_185
MIMAT0012947eca-miR-6531_......685
MIMAT0012632bmo-miR-27528_......385
MIMAT0012501dsi-miR-9758......_385
MIMAT0009924cfa-miR-6531_......685
MIMAT0009876cfa-miR-1416......_185
MIMAT0009624sko-miR-124-5p1......_685
MIMAT0019146bfl-miR-124-5p1......_685
MIMAT0009358bta-miR-6531_......685
MIMAT0009102dya-miR-2872_......785
MIMAT0009003dwi-miR-2872_......785
MIMAT0008930dvi-miR-2872_......785
MIMAT0008899dsi-miR-2872_......785
MIMAT0008770dse-miR-2872_......785
MIMAT0008757dpe-miR-2872_......785
MIMAT0008659dmo-miR-2872_......785
MIMAT0008563dgr-miR-2872_......785
MIMAT0008483der-miR-2872_......785
MIMAT0008424dan-miR-2872_......785
MIMAT0019114tca-miR-124-5p1......_685
MIMAT0008303ptr-miR-6531_......685
MIMAT0006494mml-miR-653-5p1_......685
MIMAT0007378gma-miR15193......_885
MIMAT0007377gma-miR15182_......785
MIMAT0005233smo-miR1082b1_......685
MIMAT0020904dme-miR-1007-5p3......_885
MIMAT0005491dme-miR-975-5p8......_385
MIMAT0004943mmu-miR-653-5p1_......685
MIMAT0012109sme-miR-87a-5p6......_185
MIMAT0003791bta-miR-142-3p1......_685
MIMAT0003380rno-miR-505-3p8_......385
MIMAT0003328hsa-miR-653-5p1_......685
MIMAT0026573mml-miR-21-3p6_......185
MIMAT0002201ppa-miR-1416......_185
MIMAT0002200ppy-miR-1416......_185
MIMAT0002198ggo-miR-1416......_185
MIMAT0002196mml-miR-141-3p6......_185
MIMAT0002180kshv-miR-K12-10b3_......885
MIMAT0001251dps-miR-2872_......785
MIMAT0000360dme-miR-287-3p2_......785
MIMAT0004494hsa-miR-21-3p6_......185