RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | ataaggcc | 8 | ||
MIMAT0028171 | dev-miR-D2-3p | 1 | ......._ | 7 | 87 |
MIMAT0027332 | ppe-miR6296 | 1 | _....... | 7 | 87 |
MIMAT0007548 | gga-miR-1665 | 1 | _....... | 7 | 87 |
MIMAT0005145 | ppt-miR1037 | 8 | ......._ | 2 | 87 |
MIMAT0021221 | mtr-miR5235b | 1 | ......t. | 8 | 87 |
MIMAT0021220 | mtr-miR5235a | 1 | ......t. | 8 | 87 |
MIMAT0019028 | hsa-miR-4493 | 1 | .g...... | 8 | 87 |
MIMAT0016864 | hsa-miR-4312 | 8 | .c...... | 1 | 87 |
MIMAT0037138 | ata-miR5200-5p | 8 | _......_ | 3 | 75 |
MIMAT0036671 | oha-miR-124-4-3p | 1 | _......_ | 6 | 75 |
MIMAT0036670 | oha-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0036668 | oha-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0035922 | chi-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0035581 | dvi-miR-962-5p | 1 | ......__ | 6 | 75 |
MIMAT0035546 | bdi-miR5200b-5p | 6 | _......_ | 1 | 75 |
MIMAT0035544 | bdi-miR5200a-5p | 6 | _......_ | 1 | 75 |
MIMAT0035293 | gsa-miR-124b-3p | 1 | _......_ | 6 | 75 |
MIMAT0035275 | gsa-miR-124a-3p | 1 | _......_ | 6 | 75 |
MIMAT0035131 | efu-miR-124 | 2 | _......_ | 7 | 75 |
MIMAT0035018 | efu-miR-9321 | 8 | __...... | 3 | 75 |
MIMAT0033543 | sma-miR-8419-3p | 7 | ......__ | 2 | 75 |
MIMAT0033481 | str-miR-8395-3p | 1 | _......_ | 6 | 75 |
MIMAT0033439 | str-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0033361 | str-miR-8370-3p | 1 | _......_ | 6 | 75 |
MIMAT0032963 | ppc-miR-8249-3p | 1 | _......_ | 6 | 75 |
MIMAT0031601 | bbe-miR-184-5p | 7 | ......__ | 2 | 75 |
MIMAT0031578 | bbe-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0031414 | mmu-miR-1668 | 3 | __...... | 8 | 75 |
MIMAT0031206 | stu-miR8028-5p | 7 | ......__ | 2 | 75 |
MIMAT0030787 | prd-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0030471 | prd-miR-84-3p | 7 | __...... | 2 | 75 |
MIMAT0030230 | bdi-miR7745-5p | 3 | _......_ | 8 | 75 |
MIMAT0032204 | lva-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0032157 | pmi-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0029752 | cbn-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0029644 | crm-miR-124b | 1 | _......_ | 6 | 75 |
MIMAT0029608 | cbr-miR-124c | 1 | _......_ | 6 | 75 |
MIMAT0029607 | cbr-miR-124b | 1 | _......_ | 6 | 75 |
MIMAT0029396 | ipu-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0029042 | gga-miR-7444-5p | 2 | _......_ | 7 | 75 |
MIMAT0028845 | mdo-miR-7386i-3p | 3 | ......__ | 8 | 75 |
MIMAT0026405 | sbi-miR6220-3p | 8 | _......_ | 3 | 75 |
MIMAT0028055 | mmu-miR-7074-3p | 8 | __...... | 3 | 75 |
MIMAT0027973 | mmu-miR-7034-3p | 8 | __...... | 3 | 75 |
MIMAT0027437 | hsa-miR-6768-3p | 3 | __...... | 8 | 75 |
MIMAT0025624 | gga-miR-6558-3p | 7 | __...... | 2 | 75 |
MIMAT0025585 | mmu-miR-6540-5p | 2 | _......_ | 7 | 75 |
MIMAT0025431 | pol-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0025147 | mmu-miR-6396 | 8 | __...... | 3 | 75 |
MIMAT0025026 | sma-miR-124a-3p | 1 | _......_ | 6 | 75 |
MIMAT0024937 | hme-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0024556 | cca-miR6108d | 1 | ......__ | 6 | 75 |
MIMAT0024474 | mse-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0023740 | cgr-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0023338 | hco-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0022573 | ola-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0022535 | ola-miR-184-5p | 7 | ......__ | 2 | 75 |
MIMAT0023089 | tur-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0023072 | tur-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0022378 | mmu-miR-5624-3p | 2 | _......_ | 7 | 75 |
MIMAT0021813 | aca-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0021726 | aca-miR-124b | 1 | _......_ | 6 | 75 |
MIMAT0021725 | aca-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0021496 | asu-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0021392 | rmi-miR-5319 | 8 | __...... | 3 | 75 |
MIMAT0020559 | osa-miR5074 | 2 | __...... | 7 | 75 |
MIMAT0020267 | emu-miR-124b | 1 | _......_ | 6 | 75 |
MIMAT0020266 | emu-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0020242 | egr-miR-124b-3p | 1 | _......_ | 6 | 75 |
MIMAT0020240 | egr-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0020120 | xbo-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0019950 | hsa-miR-1245b-5p | 8 | __...... | 3 | 75 |
MIMAT0019890 | hsa-miR-4753-5p | 2 | __...... | 7 | 75 |
MIMAT0019883 | hsa-miR-4747-3p | 1 | __...... | 6 | 75 |
MIMAT0019445 | pma-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0019344 | mmu-miR-3964 | 1 | ......__ | 6 | 75 |
MIMAT0019227 | hsa-miR-3922-5p | 3 | __...... | 8 | 75 |
MIMAT0018896 | tca-miR-193-5p | 8 | __...... | 3 | 75 |
MIMAT0016263 | sja-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0015929 | ppy-miR-506 | 1 | _......_ | 6 | 75 |
MIMAT0015747 | ppy-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0015688 | nvi-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0015476 | bmo-miR-3289 | 7 | __...... | 2 | 75 |
MIMAT0015011 | hsa-miR-3142 | 1 | __...... | 6 | 75 |
MIMAT0015011 | hsa-miR-3142 | 8 | __...... | 3 | 75 |
MIMAT0014712 | api-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0014507 | tgu-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0014388 | cqu-miR-100-3p | 2 | __...... | 7 | 75 |
MIMAT0014360 | cqu-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0014282 | aae-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0014116 | bma-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0012906 | eca-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0012685 | isc-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0012639 | dpu-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0012496 | dsi-miR-962 | 1 | ......__ | 6 | 75 |
MIMAT0012303 | dps-miR-2516 | 7 | _......_ | 2 | 75 |
MIMAT0011645 | ppc-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0011557 | crm-miR-235-5p | 7 | __...... | 2 | 75 |
MIMAT0011541 | crm-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0011471 | cbr-miR-90b-5p | 7 | __...... | 2 | 75 |
MIMAT0011239 | sme-miR-124e-3p | 1 | _......_ | 6 | 75 |
MIMAT0011238 | sme-miR-124d-3p | 1 | _......_ | 6 | 75 |
MIMAT0009666 | spu-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0009632 | sko-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0009625 | sko-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0009578 | lgi-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0009555 | cte-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0019148 | bfl-miR-184-5p | 7 | ......__ | 2 | 75 |
MIMAT0009482 | bfl-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0013774 | bta-miR-124b | 1 | _......_ | 6 | 75 |
MIMAT0009131 | pta-miR1314 | 8 | __...... | 3 | 75 |
MIMAT0009121 | dya-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0009105 | dya-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0009027 | dwi-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008988 | dwi-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008948 | dvi-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008939 | dvi-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0008903 | dsi-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008847 | dsi-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008839 | dse-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008821 | dse-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008731 | dpe-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008700 | dpe-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008688 | dmo-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008673 | dmo-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008615 | dgr-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008566 | dgr-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008547 | der-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008511 | der-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008435 | dan-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0008431 | dan-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0008370 | tca-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0006657 | cfa-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0007654 | gga-miR-1749-5p | 3 | ......__ | 8 | 75 |
MIMAT0007632 | gga-miR-1730-3p | 1 | __...... | 6 | 75 |
MIMAT0006126 | csa-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0006100 | cin-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0006083 | odi-miR-124b | 1 | _......_ | 6 | 75 |
MIMAT0006082 | odi-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0006019 | odi-miR-1468 | 1 | _......_ | 6 | 75 |
MIMAT0007114 | oan-miR-124a-1-3p | 1 | _......_ | 6 | 75 |
MIMAT0005779 | pbi-miR-506 | 1 | _......_ | 6 | 75 |
MIMAT0005770 | ptr-miR-506 | 1 | _......_ | 6 | 75 |
MIMAT0005762 | mml-miR-506-3p | 1 | _......_ | 6 | 75 |
MIMAT0005752 | ssy-miR-506 | 1 | _......_ | 6 | 75 |
MIMAT0005476 | dme-miR-962-5p | 1 | ......__ | 6 | 75 |
MIMAT0026673 | mdo-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0004102 | mdo-miR-124a-3p | 2 | _......_ | 7 | 75 |
MIMAT0020350 | cel-miR-791-5p | 7 | ......__ | 2 | 75 |
MIMAT0012123 | sme-miR-748-5p | 7 | ......__ | 2 | 75 |
MIMAT0003995 | sme-miR-124c-3p | 1 | _......_ | 6 | 75 |
MIMAT0003993 | sme-miR-124b-3p | 1 | _......_ | 6 | 75 |
MIMAT0003992 | sme-miR-124a-3p | 1 | _......_ | 6 | 75 |
MIMAT0003811 | bta-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0004198 | bmo-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0003683 | xtr-miR-124 | 2 | _......_ | 7 | 75 |
MIMAT0017256 | mmu-miR-700-5p | 1 | _......_ | 6 | 75 |
MIMAT0002897 | tni-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0002896 | fru-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0002878 | hsa-miR-506-3p | 1 | _......_ | 6 | 75 |
MIMAT0002471 | lla-miR-124a | 2 | _......_ | 7 | 75 |
MIMAT0002470 | mml-miR-124a-3p | 2 | _......_ | 7 | 75 |
MIMAT0002469 | ptr-miR-124a | 2 | _......_ | 7 | 75 |
MIMAT0002468 | ppy-miR-124a | 2 | _......_ | 7 | 75 |
MIMAT0002467 | ppa-miR-124a | 2 | _......_ | 7 | 75 |
MIMAT0002466 | age-miR-124a | 2 | _......_ | 7 | 75 |
MIMAT0002465 | ggo-miR-124a | 2 | _......_ | 7 | 75 |
MIMAT0002156 | ssc-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0001819 | dre-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0001499 | aga-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0001473 | ame-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0001229 | dps-miR-124 | 1 | _......_ | 6 | 75 |
MIMAT0001174 | gga-miR-124b | 2 | _......_ | 7 | 75 |
MIMAT0026526 | gga-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0001128 | gga-miR-124a-3p | 2 | _......_ | 7 | 75 |
MIMAT0000828 | rno-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0000494 | cbr-miR-124a | 1 | _......_ | 6 | 75 |
MIMAT0000422 | hsa-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0000351 | dme-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0000330 | dme-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0020331 | cel-miR-235-5p | 7 | __...... | 2 | 75 |
MIMAT0000282 | cel-miR-124-3p | 1 | _......_ | 6 | 75 |
MIMAT0022690 | mmu-miR-184-5p | 6 | ......__ | 1 | 75 |
MIMAT0000134 | mmu-miR-124-3p | 1 | _......_ | 6 | 75 |