RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | ataatatg | 8 | ||
MIMAT0036556 | tch-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0036283 | chi-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0035676 | bra-miR9560b-3p | 8 | _....... | 2 | 87 |
MIMAT0035674 | bra-miR9560a-3p | 8 | _....... | 2 | 87 |
MIMAT0034000 | gra-miR8643b | 8 | _....... | 2 | 87 |
MIMAT0033999 | gra-miR8643a | 8 | _....... | 2 | 87 |
MIMAT0031759 | bma-miR-60 | 7 | ......._ | 1 | 87 |
MIMAT0030880 | stu-miR7994b-3p | 7 | ......._ | 1 | 87 |
MIMAT0030879 | stu-miR7994a | 7 | ......._ | 1 | 87 |
MIMAT0030151 | bdi-miR7714-3p | 2 | _....... | 8 | 87 |
MIMAT0028142 | ddi-miR-7131c-3p | 7 | _....... | 1 | 87 |
MIMAT0028138 | ddi-miR-7131a-3p | 7 | _....... | 1 | 87 |
MIMAT0024504 | mse-miR-6096 | 8 | ......._ | 2 | 87 |
MIMAT0024489 | mse-miR-2763 | 7 | ......._ | 1 | 87 |
MIMAT0024183 | ggo-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0022497 | hsa-miR-5692b | 2 | ......._ | 8 | 87 |
MIMAT0022476 | hsa-miR-5692c | 2 | ......._ | 8 | 87 |
MIMAT0021315 | mtr-miR5208d | 7 | _....... | 1 | 87 |
MIMAT0019969 | hsa-miR-4795-3p | 7 | ......._ | 1 | 87 |
MIMAT0018320 | gma-miR4402 | 8 | _....... | 2 | 87 |
MIMAT0016090 | ppy-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0015706 | nvi-miR-3477 | 7 | _....... | 1 | 87 |
MIMAT0013172 | eca-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0013655 | bmo-miR-2771-3p | 7 | ......._ | 1 | 87 |
MIMAT0009361 | bta-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0008305 | ptr-miR-656 | 8 | ......._ | 2 | 87 |
MIMAT0006497 | mml-miR-656-3p | 8 | ......._ | 2 | 87 |
MIMAT0003332 | hsa-miR-656-3p | 8 | ......._ | 2 | 87 |
MIMAT0005499 | dme-miR-983-5p | 1 | ......c. | 8 | 87 |
MIMAT0036619 | tch-miR-9771p | 1 | __...... | 6 | 75 |
MIMAT0036589 | tch-miR-374a-5p | 3 | ......__ | 8 | 75 |
MIMAT0036583 | tch-miR-374b-5p | 3 | ......__ | 8 | 75 |
MIMAT0036544 | tch-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0036352 | gma-miR5780c | 3 | _......_ | 8 | 75 |
MIMAT0036282 | chi-miR-655 | 1 | ......__ | 6 | 75 |
MIMAT0036182 | chi-miR-374b-5p | 3 | ......__ | 8 | 75 |
MIMAT0036180 | chi-miR-374a-5p | 3 | ......__ | 8 | 75 |
MIMAT0036179 | chi-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0035809 | tae-miR5049-3p | 1 | __...... | 6 | 75 |
MIMAT0035799 | tae-miR1120c-5p | 1 | _......_ | 6 | 75 |
MIMAT0035788 | tae-miR1122c-3p | 3 | _......_ | 8 | 75 |
MIMAT0035779 | tae-miR9667-5p | 2 | __...... | 7 | 75 |
MIMAT0035301 | gsa-miR-1993-3p | 6 | ......__ | 1 | 75 |
MIMAT0034387 | cfa-miR-889 | 2 | _......_ | 7 | 75 |
MIMAT0034170 | gra-miR8746 | 8 | __...... | 3 | 75 |
MIMAT0034015 | gra-miR8709a | 6 | _......_ | 1 | 75 |
MIMAT0033666 | sma-miR-2162-3p | 6 | ......__ | 1 | 75 |
MIMAT0033661 | sma-miR-8471-5p | 3 | _......_ | 8 | 75 |
MIMAT0033649 | sma-miR-8465-5p | 1 | ......__ | 6 | 75 |
MIMAT0033604 | sma-miR-8447-5p | 2 | __...... | 7 | 75 |
MIMAT0033562 | sma-miR-8429-5p | 3 | __...... | 8 | 75 |
MIMAT0033409 | str-miR-8378-3p | 6 | ......__ | 1 | 75 |
MIMAT0033391 | str-miR-8374-3p | 3 | __...... | 8 | 75 |
MIMAT0032921 | ppc-miR-84d-3p | 7 | __...... | 2 | 75 |
MIMAT0031555 | ppe-miR8129-3p | 1 | ......__ | 6 | 75 |
MIMAT0030589 | prd-miR-60-3p | 6 | ......__ | 1 | 75 |
MIMAT0030493 | prd-miR-7874-3p | 8 | __...... | 3 | 75 |
MIMAT0030237 | bdi-miR7748a-3p | 1 | __...... | 6 | 75 |
MIMAT0030063 | oar-miR-374b | 3 | ......__ | 8 | 75 |
MIMAT0030062 | oar-miR-374a | 3 | ......__ | 8 | 75 |
MIMAT0029960 | osa-miR7694-3p | 7 | __...... | 2 | 75 |
MIMAT0029774 | cbn-miR-60 | 6 | ......__ | 1 | 75 |
MIMAT0028795 | mdo-miR-7374a-3p | 1 | _......_ | 6 | 75 |
MIMAT0028362 | mml-miR-7199-5p | 2 | __...... | 7 | 75 |
MIMAT0026360 | bma-miR-5861 | 1 | _......_ | 6 | 75 |
MIMAT0026353 | bma-miR-5855 | 1 | _......_ | 6 | 75 |
MIMAT0028140 | ddi-miR-7131b | 6 | _......_ | 1 | 75 |
MIMAT0024955 | hme-miR-2763 | 6 | ......__ | 1 | 75 |
MIMAT0024287 | ggo-miR-556 | 6 | _......_ | 1 | 75 |
MIMAT0024154 | ggo-miR-655 | 1 | ......__ | 6 | 75 |
MIMAT0024126 | ggo-miR-374b | 3 | ......__ | 8 | 75 |
MIMAT0024115 | ggo-miR-889 | 2 | _......_ | 7 | 75 |
MIMAT0024033 | ptr-miR-655 | 1 | ......__ | 6 | 75 |
MIMAT0023939 | cgr-miR-374-5p | 3 | ......__ | 8 | 75 |
MIMAT0023938 | cgr-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0023468 | hco-miR-60 | 6 | ......__ | 1 | 75 |
MIMAT0023009 | bra-miR5712 | 7 | _......_ | 2 | 75 |
MIMAT0022332 | cin-miR-5603-3p | 1 | _......_ | 6 | 75 |
MIMAT0022282 | hsa-miR-5583-3p | 2 | __...... | 7 | 75 |
MIMAT0021518 | asu-miR-5342-3p | 1 | _......_ | 6 | 75 |
MIMAT0019569 | pma-miR-4541 | 6 | __...... | 1 | 75 |
MIMAT0019332 | oar-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0019301 | oar-miR-655-3p | 1 | ......__ | 6 | 75 |
MIMAT0019054 | hsa-miR-4517 | 2 | __...... | 7 | 75 |
MIMAT0018443 | hsa-miR-374c-5p | 1 | ......__ | 6 | 75 |
MIMAT0018910 | tca-miR-3903-3p | 6 | _......_ | 1 | 75 |
MIMAT0018659 | tca-miR-3817-3p | 1 | _......_ | 6 | 75 |
MIMAT0018638 | tca-miR-3808-5p | 7 | __...... | 2 | 75 |
MIMAT0018622 | tca-miR-3803-5p | 8 | _......_ | 3 | 75 |
MIMAT0016780 | cin-miR-4172-3p | 6 | ......__ | 1 | 75 |
MIMAT0016545 | cin-miR-4027-3p | 7 | _......_ | 2 | 75 |
MIMAT0016537 | cin-miR-4022-3p | 1 | __...... | 6 | 75 |
MIMAT0016273 | sja-miR-2162-3p | 6 | ......__ | 1 | 75 |
MIMAT0016124 | ppy-miR-889 | 2 | _......_ | 7 | 75 |
MIMAT0016089 | ppy-miR-655 | 1 | ......__ | 6 | 75 |
MIMAT0016003 | ppy-miR-556-3p | 6 | _......_ | 1 | 75 |
MIMAT0015862 | ppy-miR-374a | 3 | ......__ | 8 | 75 |
MIMAT0015856 | ppy-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0015714 | ssc-miR-369 | 2 | ......__ | 7 | 75 |
MIMAT0017517 | aly-miR171b-5p | 8 | _......_ | 3 | 75 |
MIMAT0015584 | bmo-miR-3386-3p | 1 | _......_ | 6 | 75 |
MIMAT0015559 | bmo-miR-3372-5p | 8 | ......__ | 3 | 75 |
MIMAT0015414 | bmo-miR-3232 | 7 | __...... | 2 | 75 |
MIMAT0014953 | mmu-miR-374c-5p | 1 | ......__ | 6 | 75 |
MIMAT0013915 | ssc-miR-374b-5p | 3 | ......__ | 8 | 75 |
MIMAT0013913 | ssc-miR-374a-5p | 3 | ......__ | 8 | 75 |
MIMAT0013214 | eca-miR-374b | 3 | ......__ | 8 | 75 |
MIMAT0013213 | eca-miR-374a | 3 | ......__ | 8 | 75 |
MIMAT0013175 | eca-miR-889 | 2 | _......_ | 7 | 75 |
MIMAT0013171 | eca-miR-655 | 1 | ......__ | 6 | 75 |
MIMAT0013141 | eca-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0013748 | bmo-miR-2834 | 1 | _......_ | 6 | 75 |
MIMAT0013650 | bmo-miR-2769 | 8 | _......_ | 3 | 75 |
MIMAT0013638 | bmo-miR-2763-3p | 6 | ......__ | 1 | 75 |
MIMAT0013622 | bmo-miR-2807c-3p | 7 | __...... | 2 | 75 |
MIMAT0013600 | bmo-miR-33-3p | 2 | __...... | 7 | 75 |
MIMAT0011709 | ppc-miR-2245 | 1 | __...... | 6 | 75 |
MIMAT0011562 | crm-miR-60-3p | 6 | ......__ | 1 | 75 |
MIMAT0012153 | sme-miR-2162-3p | 7 | ......__ | 2 | 75 |
MIMAT0011241 | sme-miR-1993-3p | 6 | ......__ | 1 | 75 |
MIMAT0010062 | osa-miR2099-5p | 3 | __...... | 8 | 75 |
MIMAT0009723 | lgi-miR-1993 | 6 | ......__ | 1 | 75 |
MIMAT0009701 | cte-miR-1993 | 6 | ......__ | 1 | 75 |
MIMAT0009679 | cte-miR-216b | 1 | _......_ | 6 | 75 |
MIMAT0009589 | lgi-miR-216b | 1 | _......_ | 6 | 75 |
MIMAT0009360 | bta-miR-655 | 1 | ......__ | 6 | 75 |
MIMAT0009302 | bta-miR-374b | 3 | ......__ | 8 | 75 |
MIMAT0008331 | ptr-miR-889 | 2 | _......_ | 7 | 75 |
MIMAT0008237 | ptr-miR-556 | 6 | _......_ | 1 | 75 |
MIMAT0008124 | ptr-miR-374b | 3 | ......__ | 8 | 75 |
MIMAT0008123 | ptr-miR-374a | 3 | ......__ | 8 | 75 |
MIMAT0008119 | ptr-miR-369 | 2 | ......__ | 7 | 75 |
MIMAT0006754 | cfa-miR-374b | 3 | ......__ | 8 | 75 |
MIMAT0006753 | cfa-miR-374a | 3 | ......__ | 8 | 75 |
MIMAT0006727 | cfa-miR-369 | 2 | ......__ | 7 | 75 |
MIMAT0006528 | mml-miR-889-3p | 2 | _......_ | 7 | 75 |
MIMAT0006425 | mml-miR-556-3p | 6 | _......_ | 1 | 75 |
MIMAT0006301 | mml-miR-374b-5p | 3 | ......__ | 8 | 75 |
MIMAT0006300 | mml-miR-374a-5p | 3 | ......__ | 8 | 75 |
MIMAT0006294 | mml-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0007396 | gma-miR1533 | 1 | ......__ | 6 | 75 |
MIMAT0009208 | osa-miR1429-5p | 2 | _......_ | 7 | 75 |
MIMAT0005937 | hsa-miR-1279 | 7 | __...... | 2 | 75 |
MIMAT0004955 | hsa-miR-374b-5p | 3 | ......__ | 8 | 75 |
MIMAT0004921 | hsa-miR-889-3p | 2 | _......_ | 7 | 75 |
MIMAT0004342 | bta-miR-374a | 3 | ......__ | 8 | 75 |
MIMAT0003802 | bta-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0003727 | mmu-miR-374b-5p | 3 | ......__ | 8 | 75 |
MIMAT0003331 | hsa-miR-655-3p | 1 | ......__ | 6 | 75 |
MIMAT0004793 | hsa-miR-556-3p | 6 | _......_ | 1 | 75 |
MIMAT0003208 | rno-miR-374-5p | 3 | ......__ | 8 | 75 |
MIMAT0003207 | rno-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0003186 | mmu-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0031899 | ath-miR171b-5p | 8 | _......_ | 3 | 75 |
MIMAT0000727 | hsa-miR-374a-5p | 3 | ......__ | 8 | 75 |
MIMAT0000721 | hsa-miR-369-3p | 2 | ......__ | 7 | 75 |
MIMAT0000479 | cbr-miR-60 | 6 | ......__ | 1 | 75 |
MIMAT0000032 | cel-miR-60-3p | 6 | ......__ | 1 | 75 |