RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | atctcat | 7 | ||
MIMAT0035619 | dvi-miR-9538-3p | 7 | ....... | 1 | 100 |
MIMAT0033889 | atr-miR8600 | 1 | ....... | 7 | 100 |
MIMAT0030925 | stu-miR1886i-5p | 7 | ....... | 1 | 100 |
MIMAT0030847 | stu-miR7980a | 7 | ....... | 1 | 100 |
MIMAT0025635 | gga-miR-6565-5p | 7 | ....... | 1 | 100 |
MIMAT0021240 | mtr-miR5244 | 2 | ....... | 8 | 100 |
MIMAT0020627 | mmu-miR-5119 | 2 | ....... | 8 | 100 |
MIMAT0018173 | mghv-miR-M1-13-3p | 2 | ....... | 8 | 100 |
MIMAT0017920 | aly-miR3444b | 1 | ....... | 7 | 100 |
MIMAT0017722 | aly-miR3444a-3p | 2 | ....... | 8 | 100 |
MIMAT0037154 | ata-miR9772b-5p | 6 | ......_ | 1 | 85 |
MIMAT0037106 | ata-miR9772a-5p | 6 | ......_ | 1 | 85 |
MIMAT0036982 | tae-miR9772 | 6 | ......_ | 1 | 85 |
MIMAT0036833 | oha-miR-216-5p | 3 | ......_ | 8 | 85 |
MIMAT0036724 | oha-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0036714 | oha-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0036476 | tch-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0035964 | chi-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0035959 | chi-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0035856 | bra-miR400-5p | 7 | _...... | 2 | 85 |
MIMAT0035580 | dvi-miR-958-3p | 6 | ......_ | 1 | 85 |
MIMAT0035291 | gsa-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0035255 | gsa-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0035084 | efu-miR-9335 | 6 | ......_ | 1 | 85 |
MIMAT0034635 | eca-miR-9090 | 6 | ......_ | 1 | 85 |
MIMAT0034615 | eca-miR-9070 | 6 | ......_ | 1 | 85 |
MIMAT0034296 | cfa-miR-8806 | 6 | ......_ | 1 | 85 |
MIMAT0033968 | esi-miR8623d | 1 | _...... | 6 | 85 |
MIMAT0033960 | esi-miR8623a | 1 | _...... | 6 | 85 |
MIMAT0033769 | pxy-miR-8527 | 8 | _...... | 3 | 85 |
MIMAT0033728 | pxy-miR-8508 | 6 | _...... | 1 | 85 |
MIMAT0033726 | pxy-bantam | 6 | ......_ | 1 | 85 |
MIMAT0033683 | sma-miR-8481-5p | 8 | ......_ | 3 | 85 |
MIMAT0033632 | sma-miR-755-3p | 6 | ......_ | 1 | 85 |
MIMAT0033465 | str-miR-58-3p | 6 | ......_ | 1 | 85 |
MIMAT0033429 | str-miR-8384-3p | 6 | ......_ | 1 | 85 |
MIMAT0033377 | str-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0033345 | str-miR-81c-3p | 6 | ......_ | 1 | 85 |
MIMAT0033343 | str-miR-81b-3p | 6 | ......_ | 1 | 85 |
MIMAT0033332 | str-miR-81a-3p | 6 | ......_ | 1 | 85 |
MIMAT0033314 | str-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0033140 | ppc-miR-8307-5p | 7 | _...... | 2 | 85 |
MIMAT0032906 | ppc-miR-8230-5p | 3 | ......_ | 8 | 85 |
MIMAT0032518 | ssa-miR-216b-5p | 3 | ......_ | 8 | 85 |
MIMAT0032366 | ssa-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0032336 | ssa-miR-1338-3p | 1 | ......_ | 6 | 85 |
MIMAT0031739 | bma-miR-1175 | 6 | ......_ | 1 | 85 |
MIMAT0031646 | bbe-miR-216-5p | 3 | ......_ | 8 | 85 |
MIMAT0030689 | prd-miR-81-3p | 6 | ......_ | 1 | 85 |
MIMAT0030561 | prd-miR-58-3p | 6 | ......_ | 1 | 85 |
MIMAT0030553 | prd-miR-7873b-3p | 3 | ......_ | 8 | 85 |
MIMAT0030503 | prd-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0030492 | prd-miR-7874-5p | 3 | ......_ | 8 | 85 |
MIMAT0030308 | bdi-miR7777-3p.2 | 6 | ......_ | 1 | 85 |
MIMAT0030032 | oar-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0029769 | cbn-miR-259 | 3 | ......_ | 8 | 85 |
MIMAT0029694 | cbn-miR-82 | 6 | ......_ | 1 | 85 |
MIMAT0029693 | cbn-miR-58a | 6 | ......_ | 1 | 85 |
MIMAT0029692 | cbn-miR-81 | 6 | ......_ | 1 | 85 |
MIMAT0029691 | cbn-miR-80 | 6 | ......_ | 1 | 85 |
MIMAT0029637 | crm-miR-58c | 6 | ......_ | 1 | 85 |
MIMAT0029619 | crm-miR-7602 | 6 | ......_ | 1 | 85 |
MIMAT0029588 | cbr-miR-7585 | 6 | ......_ | 1 | 85 |
MIMAT0029587 | cbr-miR-7584 | 6 | ......_ | 1 | 85 |
MIMAT0029467 | ipu-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0029420 | ipu-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0029415 | ipu-miR-1388 | 1 | ......_ | 6 | 85 |
MIMAT0031147 | aja-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0026224 | ccr-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0028030 | mmu-miR-7063-5p | 6 | _...... | 1 | 85 |
MIMAT0025689 | gga-miR-6595-5p | 6 | ......_ | 1 | 85 |
MIMAT0024930 | hme-bantam | 6 | ......_ | 1 | 85 |
MIMAT0024837 | hvu-miR6209 | 6 | ......_ | 1 | 85 |
MIMAT0024452 | mse-bantam | 6 | ......_ | 1 | 85 |
MIMAT0023772 | cgr-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0023484 | hco-miR-5885c | 6 | ......_ | 1 | 85 |
MIMAT0023417 | hco-miR-5885b | 6 | ......_ | 1 | 85 |
MIMAT0023333 | hco-miR-259 | 3 | ......_ | 8 | 85 |
MIMAT0023319 | hco-miR-5885a | 6 | ......_ | 1 | 85 |
MIMAT0023171 | gma-miR5771 | 1 | ......_ | 6 | 85 |
MIMAT0022777 | sha-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0022775 | sha-miR-340 | 3 | _...... | 8 | 85 |
MIMAT0022772 | sha-miR-352 | 1 | ......_ | 6 | 85 |
MIMAT0022668 | ola-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0022568 | ola-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0023104 | tur-miR-5737-5p | 3 | ......_ | 8 | 85 |
MIMAT0022140 | osa-miR5507 | 7 | _...... | 2 | 85 |
MIMAT0021875 | aca-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0021770 | aca-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0021761 | aca-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0021674 | gma-miR1513c | 7 | _...... | 2 | 85 |
MIMAT0021534 | asu-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0021474 | asu-miR-81a | 6 | ......_ | 1 | 85 |
MIMAT0021422 | asu-miR-81c-3p | 6 | ......_ | 1 | 85 |
MIMAT0021420 | asu-miR-81b-3p | 6 | ......_ | 1 | 85 |
MIMAT0021377 | isc-miR-5307 | 3 | ......_ | 8 | 85 |
MIMAT0021309 | mtr-miR2590g | 8 | _...... | 3 | 85 |
MIMAT0020535 | ath-miR5029 | 7 | _...... | 2 | 85 |
MIMAT0019924 | hsa-miR-4770 | 6 | ......_ | 1 | 85 |
MIMAT0019819 | hsa-miR-4712-3p | 7 | _...... | 2 | 85 |
MIMAT0019789 | hsa-miR-4695-3p | 3 | ......_ | 8 | 85 |
MIMAT0019607 | pma-miR-4574 | 8 | ......_ | 3 | 85 |
MIMAT0019525 | pma-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0019473 | pma-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0018819 | tca-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0018736 | tca-miR-3477-5p | 3 | ......_ | 8 | 85 |
MIMAT0018583 | ame-miR-3477 | 3 | ......_ | 8 | 85 |
MIMAT0018507 | ame-miR-1175 | 6 | ......_ | 1 | 85 |
MIMAT0018095 | hsa-miR-3672 | 6 | _...... | 1 | 85 |
MIMAT0016358 | gso-miR1507b | 1 | _...... | 6 | 85 |
MIMAT0016357 | gso-miR1507a | 1 | _...... | 6 | 85 |
MIMAT0016272 | sja-miR-2162-5p | 8 | ......_ | 3 | 85 |
MIMAT0015696 | nvi-bantam | 6 | ......_ | 1 | 85 |
MIMAT0015642 | mmu-miR-3471 | 6 | ......_ | 1 | 85 |
MIMAT0017739 | ath-miR774b-5p | 6 | ......_ | 1 | 85 |
MIMAT0017699 | aly-miR774b-5p | 6 | ......_ | 1 | 85 |
MIMAT0017583 | aly-miR400-5p | 7 | _...... | 2 | 85 |
MIMAT0015479 | bmo-miR-3292 | 6 | ......_ | 1 | 85 |
MIMAT0015401 | bmo-miR-3221 | 1 | _...... | 6 | 85 |
MIMAT0014791 | api-miR-3050 | 6 | ......_ | 1 | 85 |
MIMAT0014594 | tgu-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0014576 | tgu-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0014440 | cqu-miR-1889-5p | 3 | ......_ | 8 | 85 |
MIMAT0014421 | cqu-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0014391 | cqu-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0015371 | aae-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0014233 | aae-miR-1889-5p | 3 | ......_ | 8 | 85 |
MIMAT0014219 | aae-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0014130 | api-bantam | 6 | ......_ | 1 | 85 |
MIMAT0014093 | bma-bantam | 6 | ......_ | 1 | 85 |
MIMAT0013879 | ssc-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0013072 | eca-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0013063 | eca-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0012721 | hvt-miR-H9-5p | 3 | _...... | 8 | 85 |
MIMAT0013613 | bmo-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0012679 | isc-bantam | 6 | ......_ | 1 | 85 |
MIMAT0012634 | dpu-bantam | 6 | ......_ | 1 | 85 |
MIMAT0013591 | bta-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0012446 | dsi-miR-958-3p | 6 | ......_ | 1 | 85 |
MIMAT0012423 | dsi-miR-977 | 6 | ......_ | 1 | 85 |
MIMAT0012417 | dps-miR-2573-3p | 1 | _...... | 6 | 85 |
MIMAT0012232 | dps-miR-958-3p | 6 | ......_ | 1 | 85 |
MIMAT0011715 | ppc-miR-2250 | 6 | ......_ | 1 | 85 |
MIMAT0011656 | ppc-miR-81 | 6 | ......_ | 1 | 85 |
MIMAT0011621 | crm-miR-80-3p | 6 | ......_ | 1 | 85 |
MIMAT0011615 | crm-miR-58b-3p | 6 | ......_ | 1 | 85 |
MIMAT0011607 | crm-miR-259 | 3 | ......_ | 8 | 85 |
MIMAT0011570 | crm-miR-81-3p | 6 | ......_ | 1 | 85 |
MIMAT0011539 | crm-miR-82 | 6 | ......_ | 1 | 85 |
MIMAT0011482 | cbr-miR-58b | 6 | ......_ | 1 | 85 |
MIMAT0012169 | sme-miR-753e-3p | 6 | ......_ | 1 | 85 |
MIMAT0011293 | dre-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0011249 | sme-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0011245 | sme-miR-216-5p | 3 | ......_ | 8 | 85 |
MIMAT0011226 | sme-miR-753b-3p | 6 | ......_ | 1 | 85 |
MIMAT0011178 | vun-miR1507b | 1 | _...... | 6 | 85 |
MIMAT0010182 | sma-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0010177 | sja-bantam | 6 | ......_ | 1 | 85 |
MIMAT0010099 | tca-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0010091 | tca-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0010089 | vun-miR1507a | 1 | _...... | 6 | 85 |
MIMAT0010080 | gma-miR1507b | 1 | _...... | 6 | 85 |
MIMAT0009849 | cfa-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0009603 | lgi-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0009588 | lgi-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0009551 | cte-bantam | 6 | ......_ | 1 | 85 |
MIMAT0009550 | cte-miR-1175-3p | 6 | ......_ | 1 | 85 |
MIMAT0009535 | cte-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0009495 | bfl-miR-216-5p | 3 | ......_ | 8 | 85 |
MIMAT0009265 | bta-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0009233 | bta-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0009073 | dya-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0009057 | dya-bantam | 6 | ......_ | 1 | 85 |
MIMAT0009011 | dwi-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008985 | dwi-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008976 | dvi-miR-304-5p | 3 | ......_ | 8 | 85 |
MIMAT0032089 | dvi-miR-285-5p | 8 | ......_ | 3 | 85 |
MIMAT0008966 | dvi-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0008882 | dsi-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008861 | dsi-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008801 | dse-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008775 | dse-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008721 | dpe-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008657 | dmo-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008634 | dmo-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008595 | dgr-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008559 | dgr-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008548 | der-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008533 | der-bantam | 6 | ......_ | 1 | 85 |
MIMAT0008413 | dan-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0008409 | dan-bantam | 6 | ......_ | 1 | 85 |
MIMAT0007907 | bmo-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0012129 | ath-miR1886.2 | 6 | ......_ | 1 | 85 |
MIMAT0006682 | cfa-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0026879 | mml-miR-452-3p | 3 | _...... | 8 | 85 |
MIMAT0006242 | mml-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0006201 | mml-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0007589 | gga-miR-1697 | 2 | _...... | 7 | 85 |
MIMAT0007365 | gma-miR1507a | 1 | _...... | 6 | 85 |
MIMAT0006134 | csa-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0006111 | cin-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0007223 | oan-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0007169 | oan-miR-1388-3p | 1 | ......_ | 6 | 85 |
MIMAT0007144 | oan-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0005525 | aga-miR-1175 | 6 | ......_ | 1 | 85 |
MIMAT0005493 | dme-miR-977-3p | 6 | ......_ | 1 | 85 |
MIMAT0005471 | dme-miR-958-3p | 6 | ......_ | 1 | 85 |
MIMAT0004131 | mdo-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0004113 | mdo-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0004005 | sme-miR-747-5p | 3 | ......_ | 8 | 85 |
MIMAT0012107 | sme-miR-71c-3p | 1 | _...... | 6 | 85 |
MIMAT0012106 | sme-miR-71a-1-3p | 1 | _...... | 6 | 85 |
MIMAT0003951 | sme-bantam-c-3p | 6 | ......_ | 1 | 85 |
MIMAT0003950 | sme-bantam-b-3p | 6 | ......_ | 1 | 85 |
MIMAT0003949 | sme-bantam-a | 6 | ......_ | 1 | 85 |
MIMAT0003686 | xtr-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0003629 | xtr-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0002974 | tni-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0002973 | fru-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0002562 | ppa-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0002561 | ppy-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0002560 | ggo-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0002559 | ptr-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0002558 | lca-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0002261 | ppa-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0002260 | lla-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0002259 | ppy-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0002258 | ggo-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0002257 | ptr-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0002130 | ssc-miR-216 | 3 | ......_ | 8 | 85 |
MIMAT0001840 | dre-miR-143 | 6 | ......_ | 1 | 85 |
MIMAT0001494 | aga-bantam | 6 | ......_ | 1 | 85 |
MIMAT0001470 | ame-bantam | 6 | ......_ | 1 | 85 |
MIMAT0001284 | dre-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0001254 | dps-miR-304 | 3 | ......_ | 8 | 85 |
MIMAT0001197 | dps-bantam | 6 | ......_ | 1 | 85 |
MIMAT0001131 | gga-miR-216a | 3 | ......_ | 8 | 85 |
MIMAT0001001 | ath-miR400 | 7 | _...... | 2 | 85 |
MIMAT0000886 | rno-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0000849 | rno-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0000662 | mmu-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0000508 | cbr-miR-259 | 3 | ......_ | 8 | 85 |
MIMAT0000489 | cbr-miR-82 | 6 | ......_ | 1 | 85 |
MIMAT0000488 | cbr-miR-81 | 6 | ......_ | 1 | 85 |
MIMAT0000487 | cbr-miR-80 | 6 | ......_ | 1 | 85 |
MIMAT0000478 | cbr-miR-58a | 6 | ......_ | 1 | 85 |
MIMAT0000435 | hsa-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0000390 | dme-miR-304-5p | 3 | ......_ | 8 | 85 |
MIMAT0000365 | dme-bantam-3p | 6 | ......_ | 1 | 85 |
MIMAT0020817 | dme-miR-285-5p | 8 | ......_ | 3 | 85 |
MIMAT0000314 | cel-miR-259-5p | 3 | ......_ | 8 | 85 |
MIMAT0000273 | hsa-miR-216a-5p | 3 | ......_ | 8 | 85 |
MIMAT0000247 | mmu-miR-143-3p | 6 | ......_ | 1 | 85 |
MIMAT0000055 | cel-miR-82-3p | 6 | ......_ | 1 | 85 |
MIMAT0000054 | cel-miR-81-3p | 6 | ......_ | 1 | 85 |
MIMAT0000053 | cel-miR-80-3p | 6 | ......_ | 1 | 85 |
MIMAT0000030 | cel-miR-58a-3p | 6 | ......_ | 1 | 85 |