Result for your query miRNA sequence
>mdv1-miR-m3-5p
augaaaau

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1atgaaaat8
MIMAT0027258pgi-miR6137b1........8100
MIMAT0027257pgi-miR6137a1........8100
MIMAT0021620gma-miR53791........8100
MIMAT0003923mdv1-miR-M3-5p1........8100
MIMAT0036148chi-miR-335-3p8......._287
MIMAT0034163gra-miR8743a2......._887
MIMAT0034162gra-miR8743e2......._887
MIMAT0034161gra-miR8743d2......._887
MIMAT0034160gra-miR8743c2......._887
MIMAT0029996mtr-miR7698-5p7......._187
MIMAT0024731nta-miR6145a8_.......287
MIMAT0021251mtr-miR52532......._887
MIMAT0020156dme-miR-4946-5p8_.......287
MIMAT0016745cin-miR-4143-3p2......._887
MIMAT0013689bmo-miR-27917......._187
MIMAT0012620bmo-miR-27427......._187
MIMAT0011416sme-miR-2160-1-3p8......._287
MIMAT0026853mml-miR-335-3p8......._287
MIMAT0015241cel-miR-797-3p7......._187
MIMAT0003474mmu-miR-6942_.......887
MIMAT0004704mmu-miR-335-3p8......._287
MIMAT0004703hsa-miR-335-3p8......._287
MIMAT0030919stu-miR80208......t.187
MIMAT0023554ame-miR-6006-3p8.a......187
MIMAT0007100oan-miR-1422m-3p1.g......887
MIMAT0037078ssc-miR-9859-3p2_......_775
MIMAT0036078chi-miR-2284b1_......_675
MIMAT0035658bra-miR9408-3p6......__175
MIMAT0035504bdi-miR94951_......_675
MIMAT0035446sly-miR5302b-3p6_......_175
MIMAT0035426nve-miR-94677__......275
MIMAT0035363bol-miR94087......__275
MIMAT0035359gsa-miR-9405-3p2......__775
MIMAT0034940efu-miR-92866......__175
MIMAT0034559eca-miR-90186__......175
MIMAT0034247gra-miR7504j3......__875
MIMAT0034240gra-miR8767c6_......_175
MIMAT0034101gra-miR7504i3......__875
MIMAT0034026gra-miR86583_......_875
MIMAT0033573sma-miR-8434-3p7......__275
MIMAT0033113ppc-miR-8298-5p8......__375
MIMAT0033103ppc-miR-8295-5p6......__175
MIMAT0033100ppc-miR-8293-3p1......__675
MIMAT0033006ppc-miR-71b-5p1_......_675
MIMAT0032610ssa-miR-30d-2-3p6_......_175
MIMAT0031837cpa-miR81407_......_275
MIMAT0030918stu-miR7990b8__......375
MIMAT0031200stu-miR8001b-3p8__......375
MIMAT0031198stu-miR8015-3p7......__275
MIMAT0031194stu-miR1886g-3p6......__175
MIMAT0030682prd-miR-7920-5p8_......_375
MIMAT0030659prd-miR-7914-3p2_......_775
MIMAT0030548prd-miR-7888-5p1_......_675
MIMAT0030367hhi-miR-7372__......775
MIMAT0030192bdi-miR7729b-5p8_......_375
MIMAT0030190bdi-miR7729a-5p8_......_375
MIMAT0030183bdi-miR7725b-3p.11_......_675
MIMAT0030150bdi-miR7714-5p7__......275
MIMAT0030130bdi-miR5185m-3p3_......_875
MIMAT0029859mmu-miR-7675-3p8......__375
MIMAT0029360lja-miR75353__......875
MIMAT0029151ghr-miR7504a2......__775
MIMAT0029030gga-miR-7438-5p7_......_275
MIMAT0028927mdo-miR-7398u-3p8__......375
MIMAT0028423mmu-miR-7227-3p3_......_875
MIMAT0028194dev-miR-D19-5p2......__775
MIMAT0026396sbi-miR6218-5p2__......775
MIMAT0027875mmu-miR-6986-3p7_......_275
MIMAT0025799gga-miR-6693-3p6_......_175
MIMAT0025025sma-miR-124a-5p8__......375
MIMAT0027320ppe-miR6288a1__......675
MIMAT0022164osa-miR55297......__275
MIMAT0022159osa-miR55243__......875
MIMAT0022081aca-miR-5455-5p2_......_775
MIMAT0022031aca-miR-5412-3p2__......775
MIMAT0021622gma-miR5380b1__......675
MIMAT0021621gma-miR5380a1__......675
MIMAT0021234mtr-miR52402_......_775
MIMAT0021070gma-miR5041-5p6......__175
MIMAT0020185dme-miR-4963-5p8......__375
MIMAT0019746hsa-miR-4668-3p1__......675
MIMAT0018317gma-miR4393b2_......_775
MIMAT0018671tca-miR-3822-3p8__......375
MIMAT0018083hsa-miR-36621__......675
MIMAT0017924aly-miR42353_......_875
MIMAT0017910aly-miR42226......__175
MIMAT0016743cin-miR-4142-3p6_......_175
MIMAT0016540cin-miR-4024-3p6......__175
MIMAT0016262sja-miR-124-5p8__......375
MIMAT0017395bta-miR-2284x1_......_675
MIMAT0015464bmo-miR-32798_......_375
MIMAT0014677hma-miR-30096......__175
MIMAT0013718bmo-miR-28108__......375
MIMAT0013509mtr-miR2679c7_......_275
MIMAT0013508mtr-miR2679b7_......_275
MIMAT0013507mtr-miR2679a7_......_275
MIMAT0013362mtr-miR26282......__775
MIMAT0012295dps-miR-25101_......_675
MIMAT0011791dme-miR-2283-5p1__......675
MIMAT0009094dya-miR-2886......__175
MIMAT0009050dwi-miR-2886......__175
MIMAT0008952dvi-miR-2886......__175
MIMAT0008897dsi-miR-2886......__175
MIMAT0008806dse-miR-2886......__175
MIMAT0008753dpe-miR-2886......__175
MIMAT0008675dmo-miR-2886......__175
MIMAT0008600dgr-miR-2886......__175
MIMAT0008551der-miR-2886......__175
MIMAT0008406dan-miR-2886......__175
MIMAT0007392gma-miR15306_......_175
MIMAT0007094oan-miR-1422d-3p1_......_675
MIMAT0006939oan-miR-1422l6......__175
MIMAT0006886oan-miR-1422b-3p2__......775
MIMAT0006880oan-miR-1422a-3p3__......875
MIMAT0006862oan-miR-1339-3p1_......_675
MIMAT0026740hsa-miR-1250-3p8__......375
MIMAT0005893hsa-miR-13056_......_175
MIMAT0004938mmu-miR-875-3p3_......_875
MIMAT0020352cel-miR-794-3p1_......_675
MIMAT0003448rlcv-miR-rL1-16-3p2......__775
MIMAT0001252dps-miR-2886......__175
MIMAT0001000ebv-miR-BART2-5p7__......275
MIMAT0005445rno-miR-29b-1-5p6......__175
MIMAT0000363dme-miR-288-3p6......__175
MIMAT0000309cel-miR-253-5p7_......_275