Result for your query miRNA sequence
>mcmv-miR-m88-1*
augaccga

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1atgaccga8
MIMAT0005551mcmv-miR-m88-1-5p1........8100
MIMAT0036881oha-miR-29a-2-5p1_.......787
MIMAT0036116chi-miR-29c-5p1_.......787
MIMAT0035656bra-miR9552b-3p1_.......787
MIMAT0029567ipu-miR-75682_.......887
MIMAT0022109pti-miR54761_.......787
MIMAT0021913aca-miR-29a-2-5p1_.......787
MIMAT0018641tca-miR-3809-3p8_.......287
MIMAT0031063tgu-miR-29a-2-5p1_.......787
MIMAT0026919bta-miR-29d-5p1_.......787
MIMAT0009167oan-miR-29a-2-5p1_.......787
MIMAT0003676xtr-miR-29c-5p1_.......787
MIMAT0003154rno-miR-29c-5p1_.......787
MIMAT0004673hsa-miR-29c-5p1_.......787
MIMAT0004632mmu-miR-29c-5p1_.......787
MIMAT0036831oha-miR-215-5p1......t.887
MIMAT0036060chi-miR-215-5p1......t.887
MIMAT0032440ssa-miR-192a-5p1......t.887
MIMAT0029446ipu-miR-1921......t.887
MIMAT0029143ghr-miR7496b1......a.887
MIMAT0029142ghr-miR7496a1......a.887
MIMAT0026250ccr-miR-1921......t.887
MIMAT0023853cgr-miR-215-5p1......t.887
MIMAT0021873aca-miR-215-5p1......t.887
MIMAT0020226dme-miR-4987-3p8.c......187
MIMAT0014577tgu-miR-215-5p1......t.887
MIMAT0013190eca-miR-2151......t.887
MIMAT0012751mdo-miR-2151......t.887
MIMAT0012509dsi-miR-25771.g......887
MIMAT0010192ssc-miR-2151......t.887
MIMAT0009848cfa-miR-2151......t.887
MIMAT0007000oan-miR-215-5p1......t.887
MIMAT0003797bta-miR-2151......t.887
MIMAT0003628xtr-miR-2151......t.887
MIMAT0003615xtr-miR-1921......t.887
MIMAT0003118rno-miR-2151......t.887
MIMAT0002942tni-miR-1921......t.887
MIMAT0002941fru-miR-1921......t.887
MIMAT0002736mne-miR-2151......t.887
MIMAT0002734ggo-miR-2151......t.887
MIMAT0002732ppy-miR-2151......t.887
MIMAT0002730ptr-miR-2151......t.887
MIMAT0002728mml-miR-215-5p1......t.887
MIMAT0001275dre-miR-1921......t.887
MIMAT0001134gga-miR-215-5p1......t.887
MIMAT0031917ath-miR167c-3p8......t.187
MIMAT0000904mmu-miR-215-5p1......t.887
MIMAT0000272hsa-miR-215-5p1......t.887
MIMAT0037288ame-miR-98846__......175
MIMAT0037233ata-miR167d-3p7......__275
MIMAT0037175ata-miR167b-3p7......__275
MIMAT0037137ata-miR169c-3p8_......_375
MIMAT0037109ata-miR167e-3p6......__175
MIMAT0036971bta-miR-45231__......675
MIMAT0035458sly-miR167b-3p7......__275
MIMAT0035436sly-miR9469-3p8__......375
MIMAT0034925efu-miR-2152......__775
MIMAT0033542sma-miR-8419-5p3_......_875
MIMAT0031304stu-miR167c-3p6......__175
MIMAT0030312bdi-miR7779-5p8......__375
MIMAT0030210bdi-miR7737-5p8__......375
MIMAT0030092bdi-miR167e-3p7......__275
MIMAT0029964mtr-miR2587g2_......_775
MIMAT0029158ghr-miR7510a8......__375
MIMAT0029052gga-miR-7449-5p7......__275
MIMAT0028889mdo-miR-7395-3p1......__675
MIMAT0028843mdo-miR-7386c-3p2......__775
MIMAT0027813mmu-miR-6956-3p1_......_675
MIMAT0025300mja-miR-64923_......_875
MIMAT0024509mse-miR-61012......__775
MIMAT0023835cgr-miR-19731_......_675
MIMAT0026461hhv6b-miR-Ro6-3-3p2__......775
MIMAT0022090aca-miR-5435b-3p2......__775
MIMAT0021175mtr-miR52177......__275
MIMAT0020725bdi-miR5178-3p3_......_875
MIMAT0021115osa-miR51623......__875
MIMAT0019061hsa-miR-45231__......675
MIMAT0018302gma-miR43896__......175
MIMAT0016565cin-miR-4038-5p6_......_175
MIMAT0017685aly-miR3433-5p6......__175
MIMAT0017616aly-miR833-3p3__......875
MIMAT0017480aly-miR167d-3p7......__275
MIMAT0017478aly-miR167c-3p7......__275
MIMAT0017476aly-miR167b-3p6......__175
MIMAT0013257mtr-miR2587f2_......_775
MIMAT0013256mtr-miR2587e2_......_775
MIMAT0013255mtr-miR2587d2_......_775
MIMAT0013254mtr-miR2587c2_......_775
MIMAT0013253mtr-miR2587b2_......_775
MIMAT0013252mtr-miR2587a2_......_775
MIMAT0012001bta-miR-2431-5p8......__375
MIMAT0011997bta-miR-24277......__275
MIMAT0007035oan-miR-13701__......675
MIMAT0005560mcmv-miR-m108-2-5p.17_......_275
MIMAT0005555mcmv-miR-m107-1-5p6_......_175
MIMAT0004253ath-miR833a-3p3__......875
MIMAT0015188zma-miR167g-3p6......__175
MIMAT0015144zma-miR167d-3p6......__175
MIMAT0001303cbr-miR-3601_......_675
MIMAT0022874osa-miR167h-3p7......__275
MIMAT0000702cel-miR-360-3p1_......_675
MIMAT0022860osa-miR167c-3p6......__175
MIMAT0000588mmu-miR-341-3p6__......175
MIMAT0000587rno-miR-3416__......175