Result for your query miRNA sequence
>tumv-miR-s16
augcauuu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1atgcattt8
MIMAT0035527bdi-miR530b1_.......787
MIMAT0035526bdi-miR530a1_.......787
MIMAT0035311gsa-miR-277b-3p8_.......287
MIMAT0035297gsa-miR-277a-3p8_.......287
MIMAT0034368cfa-miR-88718......._287
MIMAT0034368cfa-miR-88713......__875
MIMAT0033785pxy-miR-2778_.......287
MIMAT0033519sma-miR-8407-3p1_.......787
MIMAT0033516sma-miR-8406-5p8_.......287
MIMAT0033449str-miR-8390-3p8_.......287
MIMAT0031741bma-miR-2328_.......287
MIMAT0030811prd-miR-277-3p8_.......287
MIMAT0030550prd-miR-7889-5p8......._287
MIMAT0030550prd-miR-7889-5p3......__875
MIMAT0030504prd-miR-7876-5p7......._187
MIMAT0030504prd-miR-7876-5p2......._887
MIMAT0029755cbn-miR-2328_.......287
MIMAT0029299mes-miR530b1_.......787
MIMAT0029298mes-miR530a1_.......787
MIMAT0028693mdo-miR-7341-3p7_.......187
MIMAT0026182cme-miR530a1_.......787
MIMAT0026104cme-miR530b1_.......787
MIMAT0025521htu-miR5301_.......787
MIMAT0024959hme-miR-2778_.......287
MIMAT0027334ppe-miR6266c8_.......287
MIMAT0027324ppe-miR6266b8_.......287
MIMAT0027290ppe-miR6266a8_.......287
MIMAT0027169lus-miR530b1_.......787
MIMAT0027162lus-miR530a1_.......787
MIMAT0024443mse-miR-2778_.......287
MIMAT0023377hco-miR-2778_.......287
MIMAT0023209gma-miR530e1_.......787
MIMAT0023199gma-miR530d1_.......787
MIMAT0023197gma-miR530c1_.......787
MIMAT0023156mtr-miR5301_.......787
MIMAT0022493hsa-miR-57008......._287
MIMAT0022493hsa-miR-57003......__875
MIMAT0022463gma-miR530b1_.......787
MIMAT0021594asu-miR-5366-5p8_.......287
MIMAT0021003gma-miR530a1_.......787
MIMAT0020275emu-miR-49898_.......287
MIMAT0020272emu-miR-2778_.......287
MIMAT0020250egr-miR-49898_.......287
MIMAT0020247egr-miR-2778_.......287
MIMAT0020192dme-miR-4967-5p1_.......787
MIMAT0020447tcc-miR530b1_.......787
MIMAT0020446tcc-miR530a1_.......787
MIMAT0018483csi-miR530b1_.......787
MIMAT0018482csi-miR530a1_.......787
MIMAT0018431nlo-miR-2778_.......287
MIMAT0018400ngi-miR-2778_.......287
MIMAT0018837tca-miR-3872-3p1_.......787
MIMAT0016269sja-miR-2778_.......287
MIMAT0016028ppy-miR-5862......._887
MIMAT0016028ppy-miR-5867......__275
MIMAT0015683nvi-miR-2778_.......287
MIMAT0014722api-miR-2778_.......287
MIMAT0014371cqu-miR-2778_.......287
MIMAT0014211aae-miR-277-3p8_.......287
MIMAT0013575cte-miR-277b8_.......287
MIMAT0013531cte-miR-277a8_.......287
MIMAT0012593aqc-miR5301_.......787
MIMAT0011699ppc-miR-2328_.......287
MIMAT0011516crm-miR-2328_.......287
MIMAT0009822nve-miR-2049-5p8_.......287
MIMAT0009099dya-miR-2778_.......287
MIMAT0009040dwi-miR-2778_.......287
MIMAT0008946dvi-miR-277-3p8_.......287
MIMAT0008850dsi-miR-2778_.......287
MIMAT0008794dse-miR-2778_.......287
MIMAT0008702dpe-miR-2778_.......287
MIMAT0008685dmo-miR-2778_.......287
MIMAT0008556dgr-miR-2778_.......287
MIMAT0008517der-miR-2778_.......287
MIMAT0008407dan-miR-2778_.......287
MIMAT0008382tca-miR-277-3p8_.......287
MIMAT0008258ptr-miR-5862......._887
MIMAT0008258ptr-miR-5867......__275
MIMAT0005998ptc-miR530b1_.......787
MIMAT0005997ptc-miR530a1_.......787
MIMAT0004024sme-miR-277d-3p8_.......287
MIMAT0004010sme-miR-277c-3p8_.......287
MIMAT0004009sme-miR-277b-3p8_.......287
MIMAT0004007sme-miR-277a-3p8_.......287
MIMAT0012113sme-miR-124b-5p1_.......787
MIMAT0004203bmo-miR-277-3p8_.......287
MIMAT0003252hsa-miR-5862......._887
MIMAT0003252hsa-miR-5867......__275
MIMAT0006787osa-miR530-5p1_.......787
MIMAT0001510aga-miR-2778_.......287
MIMAT0001481ame-miR-2778_.......287
MIMAT0001241dps-miR-2778_.......287
MIMAT0000497cbr-miR-2328_.......287
MIMAT0000338dme-miR-277-3p8_.......287
MIMAT0000287cel-miR-232-3p8_.......287
MIMAT0036555tch-miR-9771i8.c......187
MIMAT0036547tch-miR-9771h8......c.187
MIMAT0036547tch-miR-9771h3......__875
MIMAT0030014mtr-miR2592br-3p8.a......187
MIMAT0030012mtr-miR2592bq-3p8.a......187
MIMAT0030009mtr-miR2592bp-5p8.a......187
MIMAT0030008mtr-miR2592bo-3p8.a......187
MIMAT0028857mdo-miR-7386f-3p8.g......187
MIMAT0021290mtr-miR5267o1.g......887
MIMAT0021289mtr-miR5267n1.g......887
MIMAT0021288mtr-miR5267m1.g......887
MIMAT0021287mtr-miR5267l1.g......887
MIMAT0021286mtr-miR5267k1.g......887
MIMAT0021285mtr-miR5267j1.g......887
MIMAT0021284mtr-miR5267i1.g......887
MIMAT0021283mtr-miR5267h1.g......887
MIMAT0021282mtr-miR5267g1.g......887
MIMAT0021281mtr-miR5267f1.g......887
MIMAT0021280mtr-miR5267e1.g......887
MIMAT0021279mtr-miR5267d1.g......887
MIMAT0021278mtr-miR5267c1.g......887
MIMAT0021277mtr-miR5267b1.g......887
MIMAT0021276mtr-miR5267a1.g......887
MIMAT0021171mtr-miR2592ao8.a......187
MIMAT0021170mtr-miR2592an8.a......187
MIMAT0019589pma-miR-45578.a......187
MIMAT0013355mtr-miR2592n8.a......187
MIMAT0013354mtr-miR2592m8.a......187
MIMAT0013353mtr-miR2592l8.a......187
MIMAT0013352mtr-miR2592k8.a......187
MIMAT0013351mtr-miR2592h8.a......187
MIMAT0013350mtr-miR2592g8.a......187
MIMAT0013349mtr-miR2592a.2-3p8.a......187
MIMAT0013279mtr-miR2592s-3p8.a......187
MIMAT0013278mtr-miR2592r8.a......187
MIMAT0013277mtr-miR2592q-3p8.a......187
MIMAT0013276mtr-miR2592p8.a......187
MIMAT0013275mtr-miR2592o-3p8.a......187
MIMAT0013274mtr-miR2592j8.a......187
MIMAT0013273mtr-miR2592i8.a......187
MIMAT0013272mtr-miR2592f8.a......187
MIMAT0013271mtr-miR2592e-3p8.a......187
MIMAT0013270mtr-miR2592d-3p8.a......187
MIMAT0013269mtr-miR2592c8.a......187
MIMAT0013268mtr-miR2592b-3p8.a......187
MIMAT0031896cel-lsy-6-5p8.c......187
MIMAT0036905oha-miR-33a-5p2_......_775
MIMAT0036901oha-miR-33-5p2_......_775
MIMAT0036840oha-miR-2188-3p2......__775
MIMAT0036840oha-miR-2188-3p7......__275
MIMAT0036823oha-miR-20a-3p3_......_875
MIMAT0036717oha-miR-1397-5p1_......_675
MIMAT0036468tch-miR-33a-5p2_......_775
MIMAT0036153chi-miR-33b-5p2_......_775
MIMAT0036151chi-miR-33a-5p2_......_775
MIMAT0036055chi-miR-20a-3p3_......_875
MIMAT0035904chi-miR-105b-5p8__......375
MIMAT0035903chi-miR-105a8__......375
MIMAT0035878bra-miR161-5p8_......_375
MIMAT0035445sly-miR5302b-5p8__......375
MIMAT0035155efu-miR-5026_......_175
MIMAT0035152efu-miR-5006_......_175
MIMAT0034921efu-miR-332_......_775
MIMAT0034347cfa-miR-88521_......_675
MIMAT0034145gra-miR8771e2__......775
MIMAT0033458str-miR-8393-5p2__......775
MIMAT0033131ppc-miR-8303-2-3p8_......_375
MIMAT0033128ppc-miR-8303-3p8_......_375
MIMAT0033040ppc-miR-84e-3p1_......_675
MIMAT0032739ssa-miR-734-3p7__......275
MIMAT0032651ssa-miR-460-5p3_......_875
MIMAT0032620ssa-miR-33b-5p2_......_775
MIMAT0032618ssa-miR-33a-5p2_......_775
MIMAT0032387ssa-miR-153a-5p2__......775
MIMAT0031668bbe-miR-33-5p2_......_775
MIMAT0031513ppe-miR5303_......_875
MIMAT0031330stu-miR5303_......_875
MIMAT0030974stu-miR5304-5p7_......_275
MIMAT0030428hsa-miR-7853-5p8__......375
MIMAT0030256bdi-miR7756-5p7_......_275
MIMAT0032198lva-miR-33-5p2_......_775
MIMAT0032148pmi-miR-33-5p2_......_775
MIMAT0029742cbn-miR-3576__......175
MIMAT0029368lja-miR75411_......_675
MIMAT0028973oan-miR-1421an-3p1_......_675
MIMAT0028319mml-miR-7183-3p1__......675
MIMAT0026318ccr-miR-7347__......275
MIMAT0026306ccr-miR-460-5p3_......_875
MIMAT0025397tgu-miR-1397-5p1_......_675
MIMAT0024980hme-miR-332_......_775
MIMAT0027299ppe-miR62736_......_175
MIMAT0024550cca-miR6111-3p2......__775
MIMAT0024550cca-miR6111-3p7......__275
MIMAT0024429mse-miR-332_......_775
MIMAT0024187ggo-miR-502a6_......_175
MIMAT0023976cgr-miR-501-3p6_......_175
MIMAT0023974cgr-miR-5006_......_175
MIMAT0023915cgr-miR-332_......_775
MIMAT0023514spu-miR-59922_......_775
MIMAT0022642ola-miR-460-5p3_......_875
MIMAT0022089aca-miR-54618_......_375
MIMAT0022033aca-miR-5413-3p7_......_275
MIMAT0021970aca-miR-460a-5p3_......_875
MIMAT0021934aca-miR-33-5p2_......_775
MIMAT0021862aca-miR-20a-3p3_......_875
MIMAT0021764aca-miR-13971_......_675
MIMAT0020162dme-miR-4950-5p6__......175
MIMAT0020135cel-miR-49296_......_175
MIMAT0019990cel-miR-48076__......175
MIMAT0019434pma-miR-33b2_......_775
MIMAT0019433pma-miR-33a2_......_775
MIMAT0019396pma-miR-20a-3p3_......_875
MIMAT0018021vvi-miR3629a-5p2__......775
MIMAT0016828cin-miR-4207-3p2__......775
MIMAT0016806cin-miR-4188-5p8__......375
MIMAT0016728cin-miR-4132-5p7_......_275
MIMAT0015925ppy-miR-502-3p6_......_175
MIMAT0015923ppy-miR-501-3p6_......_175
MIMAT0015657nvi-miR-332_......_775
MIMAT0017441aly-miR161-5p.28_......_375
MIMAT0015504bmo-miR-33161_......_675
MIMAT0015431bmo-miR-32492......__775
MIMAT0015431bmo-miR-32497......__275
MIMAT0014793api-miR-30521_......_675
MIMAT0014614tgu-miR-460a-5p3_......_875
MIMAT0026998tgu-miR-20a-3p3_......_875
MIMAT0014538tgu-miR-33-5p2_......_775
MIMAT0014431cqu-miR-332_......_775
MIMAT0014287aae-miR-332_......_775
MIMAT0016958rlcv-miR-rL1-32-3p7__......275
MIMAT0013226eca-miR-502-3p6_......_175
MIMAT0013193eca-miR-1058__......375
MIMAT0013189eca-miR-33a2_......_775
MIMAT0013037eca-miR-33b2_......_775
MIMAT0012758mdo-miR-460-5p3_......_875
MIMAT0012754mdo-miR-33-5p2_......_775
MIMAT0013710bmo-miR-2804-3p3_......_875
MIMAT0013599bmo-miR-33-5p2_......_775
MIMAT0012662dpu-miR-332_......_775
MIMAT0011866bta-miR-23338_......_375
MIMAT0011604crm-miR-3577__......275
MIMAT0011279sme-miR-2177-3p6__......175
MIMAT0010050osa-miR2093-5p2_......_775
MIMAT0010018ppt-miR20843_......_875
MIMAT0010198cfa-miR-105b8__......375
MIMAT0009879cfa-miR-105a8__......375
MIMAT0009862cfa-miR-33b2_......_775
MIMAT0009658spu-miR-332_......_775
MIMAT0009568lgi-miR-33-3p8_......_375
MIMAT0009567lgi-miR-33-5p2_......_775
MIMAT0009553cte-miR-332_......_775
MIMAT0009474bfl-miR-332_......_775
MIMAT0009338bta-miR-502a6_......_175
MIMAT0009295bta-miR-33b2_......_775
MIMAT0009294bta-miR-33a2_......_775
MIMAT0009217bta-miR-105a8__......375
MIMAT0009216bta-miR-105b8__......375
MIMAT0032080dvi-miR-3-5p3......__875
MIMAT0032080dvi-miR-3-5p8......__375
MIMAT0008941dvi-miR-33-5p2_......_775
MIMAT0008363tca-miR-33-5p2_......_775
MIMAT0008174ptr-miR-5016_......_175
MIMAT0008108ptr-miR-33b2_......_775
MIMAT0006761cfa-miR-5026_......_175
MIMAT0006593cfa-miR-33a2_......_775
MIMAT0006447mml-miR-5862......__775
MIMAT0006447mml-miR-5867......__275
MIMAT0006366mml-miR-502-3p6_......_175
MIMAT0006173mml-miR-33b-5p2_......_775
MIMAT0007594gga-miR-17023_......_875
MIMAT0006093cin-miR-332_......_775
MIMAT0007283gga-miR-1397-5p1_......_675
MIMAT0007199oan-miR-1397-5p1_......_675
MIMAT0009169oan-miR-20a-2-3p3_......_875
MIMAT0007146oan-miR-20a-1-3p3_......_875
MIMAT0007083oan-miR-1421r-3p1_......_675
MIMAT0007073oan-miR-1421m-3p1_......_675
MIMAT0006915oan-miR-460-5p3_......_875
MIMAT0006817oan-miR-33-5p2_......_775
MIMAT0005634bna-miR1618_......_375
MIMAT0005842mmu-miR-669h-3p2......__775
MIMAT0005842mmu-miR-669h-3p7......__275
MIMAT0005841mmu-miR-669h-5p1......__675
MIMAT0005841mmu-miR-669h-5p6......__175
MIMAT0005832mmu-miR-669g1_......_675
MIMAT0005831mmu-miR-669k-3p2......__775
MIMAT0005831mmu-miR-669k-3p7......__275
MIMAT0005321rno-miR-500-3p6_......_175
MIMAT0005201ppt-miR10721_......_675
MIMAT0004429ame-miR-332_......_775
MIMAT0026707mdo-miR-20a-3p3_......_875
MIMAT0003981sme-miR-36a-5p3......__875
MIMAT0003981sme-miR-36a-5p8......__375
MIMAT0012090sme-miR-1a-5p2__......775
MIMAT0003778gga-miR-460a-5p3_......_875
MIMAT0003681xtr-miR-33b2_......_775
MIMAT0003680xtr-miR-33a2_......_775
MIMAT0003765dre-miR-7348__......375
MIMAT0003509mmu-miR-501-3p6_......_175
MIMAT0003507mmu-miR-500-3p6_......_175
MIMAT0003426ebv-miR-BART14-3p7__......275
MIMAT0003301hsa-miR-33b-5p2_......_775
MIMAT0017198rno-miR-501-3p6_......_175
MIMAT0004775hsa-miR-502-3p6_......_175
MIMAT0004774hsa-miR-501-3p6_......_175
MIMAT0026597mml-miR-20a-3p3_......_875
MIMAT0002457mne-miR-1058__......375
MIMAT0002456lla-miR-1058__......375
MIMAT0002455sla-miR-1058__......375
MIMAT0002454mml-miR-105-5p8__......375
MIMAT0002453ptr-miR-1058__......375
MIMAT0002452ppa-miR-1058__......375
MIMAT0002451ggo-miR-1058__......375
MIMAT0002450ppy-miR-1058__......375
MIMAT0002397ppa-miR-332_......_775
MIMAT0002396mne-miR-332_......_775
MIMAT0002395ppy-miR-33a2_......_775
MIMAT0002394ggo-miR-332_......_775
MIMAT0002393ptr-miR-33a2_......_775
MIMAT0002392mml-miR-33a2_......_775
MIMAT0002117ssc-miR-105-28__......375
MIMAT0002116ssc-miR-105-18__......375
MIMAT0001887dre-miR-460-5p3_......_875
MIMAT0001298cbr-miR-3577__......275
MIMAT0001100gga-miR-33-5p2_......_775
MIMAT0022883osa-miR166i-5p6_......_175
MIMAT0000812rno-miR-33-5p2_......_775
MIMAT0000699cel-miR-357-3p6__......175
MIMAT0000667mmu-miR-33-5p2_......_775
MIMAT0000603rno-miR-20a-3p3_......_875
MIMAT0004627mmu-miR-20a-3p3_......_875
MIMAT0000342dme-miR-33-5p2_......_775
MIMAT0006779ath-miR161.28_......_375
MIMAT0020784dme-miR-3-5p3......__875
MIMAT0020784dme-miR-3-5p8......__375
MIMAT0000102hsa-miR-105-5p8__......375
MIMAT0000091hsa-miR-33a-5p2_......_775
MIMAT0004493hsa-miR-20a-3p3_......_875