VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>sgiv-miR-1-3p
auugagc

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`attgagc`	7
MIMAT0030676	prd-miR-7918f-5p	1	`.......`	7	100
MIMAT0030674	prd-miR-7918e-5p	1	`.......`	7	100
MIMAT0028226	hsa-miR-7158-5p	8	`.......`	2	100
MIMAT0016420	cin-miR-4220-3p	8	`.......`	2	100
MIMAT0037305	vvi-miR171j	3	`......_`	8	85
MIMAT0037251	ata-miR171b-3p	3	`......_`	8	85
MIMAT0037229	ata-miR171d-3p	3	`......_`	8	85
MIMAT0037101	ata-miR171c-3p	1	`_......`	6	85
MIMAT0035853	bra-miR396-3p	6	`_......`	1	85
MIMAT0035620	dvi-miR-9539-5p	3	`......_`	8	85
MIMAT0035518	bdi-miR171e	3	`......_`	8	85
MIMAT0035482	sly-miR171e	1	`_......`	6	85
MIMAT0034510	eca-miR-8973	3	`_......`	8	85
MIMAT0034442	eca-miR-8914	2	`_......`	7	85
MIMAT0034286	cfa-miR-8796	1	`......_`	6	85
MIMAT0033944	atr-miR397b	3	`......_`	8	85
MIMAT0033926	atr-miR171c	3	`......_`	8	85
MIMAT0033925	atr-miR171b	1	`_......`	6	85
MIMAT0033924	atr-miR171a	3	`......_`	8	85
MIMAT0033800	pxy-miR-8541	3	`......_`	8	85
MIMAT0033473	str-miR-87b-3p	1	`_......`	6	85
MIMAT0032987	ppc-miR-8259-3p	1	`_......`	6	85
MIMAT0032844	cel-miR-8212-5p	8	`_......`	3	85
MIMAT0032813	cel-miR-8200-5p	8	`_......`	3	85
MIMAT0031857	lus-miR171j	3	`......_`	8	85
MIMAT0031809	cpa-miR171d	3	`......_`	8	85
MIMAT0031808	cpa-miR171c	3	`......_`	8	85
MIMAT0031807	cpa-miR171b	3	`......_`	8	85
MIMAT0031806	cpa-miR171a	3	`......_`	8	85
MIMAT0031496	ppe-miR397	3	`......_`	8	85
MIMAT0031345	stu-miR171e	3	`......_`	8	85
MIMAT0031341	stu-miR397-5p	1	`......_`	6	85
MIMAT0031302	stu-miR171d-3p	1	`_......`	6	85
MIMAT0031259	stu-miR171c-3p	3	`......_`	8	85
MIMAT0031257	stu-miR171a-3p	3	`......_`	8	85
MIMAT0031248	stu-miR171b-3p	1	`_......`	6	85
MIMAT0030982	hsa-miR-8055	3	`_......`	8	85
MIMAT0030791	prd-miR-7953-3p	1	`_......`	6	85
MIMAT0030156	bdi-miR7717a-5p	3	`......_`	8	85
MIMAT0030065	bdi-miR397b-5p	1	`......_`	6	85
MIMAT0031155	ama-miR396-3p	8	`_......`	3	85
MIMAT0029984	mtr-miR397-5p	3	`......_`	8	85
MIMAT0029951	bta-miR-6523b	8	`_......`	3	85
MIMAT0029722	cbn-miR-233	1	`_......`	6	85
MIMAT0029620	crm-miR-7603	3	`_......`	8	85
MIMAT0029318	lja-miR171d-5p	1	`_......`	6	85
MIMAT0029315	lja-miR171b	3	`......_`	8	85
MIMAT0029314	lja-miR171a	3	`......_`	8	85
MIMAT0029247	mes-miR171k	3	`......_`	8	85
MIMAT0029246	mes-miR171j	3	`......_`	8	85
MIMAT0029245	mes-miR171i	3	`......_`	8	85
MIMAT0029244	mes-miR171h	3	`......_`	8	85
MIMAT0029243	mes-miR171g	3	`......_`	8	85
MIMAT0029242	mes-miR171f	3	`......_`	8	85
MIMAT0029241	mes-miR171e	3	`......_`	8	85
MIMAT0029239	mes-miR171c	1	`_......`	6	85
MIMAT0029238	mes-miR171b	1	`_......`	6	85
MIMAT0028497	mdo-miR-7264-3p	8	`......_`	3	85
MIMAT0026173	cme-miR171h	3	`......_`	8	85
MIMAT0026166	cme-miR171f	3	`......_`	8	85
MIMAT0026154	cme-miR171c	3	`......_`	8	85
MIMAT0026148	cme-miR397	3	`......_`	8	85
MIMAT0026123	cme-miR171b	1	`_......`	6	85
MIMAT0026122	cme-miR171d	1	`_......`	6	85
MIMAT0026120	cme-miR171g	3	`......_`	8	85
MIMAT0026119	cme-miR171a	3	`......_`	8	85
MIMAT0026118	cme-miR171e	3	`......_`	8	85
MIMAT0026085	cme-miR171i	1	`_......`	6	85
MIMAT0025951	mdm-miR171n	1	`_......`	6	85
MIMAT0025950	mdm-miR171m	1	`_......`	6	85
MIMAT0025949	mdm-miR171l	1	`_......`	6	85
MIMAT0025948	mdm-miR171k	1	`_......`	6	85
MIMAT0025947	mdm-miR171j	1	`_......`	6	85
MIMAT0025945	mdm-miR171h	3	`......_`	8	85
MIMAT0025944	mdm-miR171g	3	`......_`	8	85
MIMAT0025943	mdm-miR171f	1	`_......`	6	85
MIMAT0025942	mdm-miR171e	3	`......_`	8	85
MIMAT0025941	mdm-miR171d	3	`......_`	8	85
MIMAT0025940	mdm-miR171c	3	`......_`	8	85
MIMAT0025939	mdm-miR171b	1	`_......`	6	85
MIMAT0025938	mdm-miR171a	1	`_......`	6	85
MIMAT0028101	ddi-miR-7098	8	`......_`	3	85
MIMAT0025508	htu-miR171c	3	`......_`	8	85
MIMAT0025507	htu-miR171b	3	`......_`	8	85
MIMAT0025506	htu-miR171a	3	`......_`	8	85
MIMAT0025505	hpa-miR171a	3	`......_`	8	85
MIMAT0025330	pde-miR171	3	`......_`	8	85
MIMAT0025184	ptc-miR6459a-5p	7	`_......`	2	85
MIMAT0025182	ptc-miR6458	8	`_......`	3	85
MIMAT0027323	ppe-miR171c	3	`......_`	8	85
MIMAT0027309	ppe-miR171b	1	`_......`	6	85
MIMAT0027304	ppe-miR171g	3	`......_`	8	85
MIMAT0027286	ppe-miR171a	3	`......_`	8	85
MIMAT0027285	ppe-miR171h	1	`_......`	6	85
MIMAT0027274	ppe-miR171f	3	`......_`	8	85
MIMAT0024711	nta-miR397	1	`......_`	6	85
MIMAT0024688	nta-miR171c	3	`......_`	8	85
MIMAT0024687	nta-miR171b	1	`_......`	6	85
MIMAT0027224	lus-miR171i	1	`_......`	6	85
MIMAT0027193	lus-miR171g	3	`......_`	8	85
MIMAT0027181	lus-miR397b	3	`......_`	8	85
MIMAT0027170	lus-miR397a	1	`......_`	6	85
MIMAT0027163	lus-miR171f	3	`......_`	8	85
MIMAT0027149	lus-miR171e	3	`......_`	8	85
MIMAT0027140	lus-miR171c	3	`......_`	8	85
MIMAT0027134	lus-miR171b	3	`......_`	8	85
MIMAT0027122	lus-miR171a	3	`......_`	8	85
MIMAT0024520	cca-miR171	3	`......_`	8	85
MIMAT0024415	mes-miR171a	3	`......_`	8	85
MIMAT0023537	dpr-miR397	3	`......_`	8	85
MIMAT0023240	gma-miR171u	3	`......_`	8	85
MIMAT0023236	gma-miR171t	1	`_......`	6	85
MIMAT0023219	gma-miR396k-3p	6	`_......`	1	85
MIMAT0023215	gma-miR171q	1	`_......`	6	85
MIMAT0023208	gma-miR171p	1	`_......`	6	85
MIMAT0023204	gma-miR171o-3p	1	`_......`	6	85
MIMAT0023202	gma-miR171n	1	`_......`	6	85
MIMAT0023200	gma-miR171m	1	`_......`	6	85
MIMAT0023067	tur-miR-87-3p	1	`_......`	6	85
MIMAT0022518	ssl-miR397	3	`......_`	8	85
MIMAT0022513	ssl-miR171b	1	`_......`	6	85
MIMAT0022512	ssl-miR171a	1	`_......`	6	85
MIMAT0022995	gma-miR171k-3p	1	`_......`	6	85
MIMAT0021628	gma-miR397b-5p	3	`......_`	8	85
MIMAT0021627	gma-miR397a	3	`......_`	8	85
MIMAT0022990	gma-miR171j-3p	3	`......_`	8	85
MIMAT0027059	bdi-miR160e-3p	3	`......_`	8	85
MIMAT0020665	bdi-miR171d-3p	3	`......_`	8	85
MIMAT0020659	bdi-miR171b	3	`......_`	8	85
MIMAT0032122	gma-miR5041-3p	2	`_......`	7	85
MIMAT0021057	gma-miR171i-3p	1	`_......`	6	85
MIMAT0021054	gma-miR171h	1	`......_`	6	85
MIMAT0020991	gma-miR171g	3	`......_`	8	85
MIMAT0020990	gma-miR171f	3	`......_`	8	85
MIMAT0020989	gma-miR171e	3	`......_`	8	85
MIMAT0020988	gma-miR171d	3	`......_`	8	85
MIMAT0020432	tcc-miR397	3	`......_`	8	85
MIMAT0020412	tcc-miR171h	3	`......_`	8	85
MIMAT0020411	tcc-miR171g	3	`......_`	8	85
MIMAT0020410	tcc-miR171f	3	`......_`	8	85
MIMAT0020409	tcc-miR171e	3	`......_`	8	85
MIMAT0020408	tcc-miR171d	3	`......_`	8	85
MIMAT0020407	tcc-miR171c	3	`......_`	8	85
MIMAT0020406	tcc-miR171b	3	`......_`	8	85
MIMAT0020405	tcc-miR171a	3	`......_`	8	85
MIMAT0018465	csi-miR397	3	`......_`	8	85
MIMAT0018456	csi-miR171a	1	`_......`	6	85
MIMAT0018364	far-miR171	3	`......_`	8	85
MIMAT0022972	gma-miR171c-3p	1	`_......`	6	85
MIMAT0018227	tae-miR171b	1	`_......`	6	85
MIMAT0018220	hvu-miR171-3p	3	`......_`	8	85
MIMAT0018892	tca-miR-3895-5p	1	`......_`	6	85
MIMAT0018794	tca-miR-375-5p	3	`_......`	8	85
MIMAT0018155	pab-miR397	3	`......_`	8	85
MIMAT0016653	cin-miR-4082-5p	8	`_......`	3	85
MIMAT0017715	aly-miR3441-3p.1	8	`......_`	3	85
MIMAT0017563	aly-miR397b-5p	3	`......_`	8	85
MIMAT0017561	aly-miR397a-5p	3	`......_`	8	85
MIMAT0017560	aly-miR396b-3p	6	`_......`	1	85
MIMAT0017520	aly-miR171c-3p	1	`_......`	6	85
MIMAT0017518	aly-miR171b-3p	1	`_......`	6	85
MIMAT0017516	aly-miR171a-3p	3	`......_`	8	85
MIMAT0017514	aly-miR170-3p	3	`......_`	8	85
MIMAT0014193	rco-miR397	3	`......_`	8	85
MIMAT0014178	rco-miR171g	3	`......_`	8	85
MIMAT0014177	rco-miR171f	3	`......_`	8	85
MIMAT0014176	rco-miR171e	3	`......_`	8	85
MIMAT0014175	rco-miR171d	3	`......_`	8	85
MIMAT0014174	rco-miR171c	3	`......_`	8	85
MIMAT0014173	rco-miR171b	1	`_......`	6	85
MIMAT0014172	rco-miR171a	1	`_......`	6	85
MIMAT0014087	crt-miR171	3	`......_`	8	85
MIMAT0014082	ctr-miR171	1	`_......`	6	85
MIMAT0014075	ccl-miR171	3	`......_`	8	85
MIMAT0014019	zma-miR397b-5p	3	`......_`	8	85
MIMAT0014018	zma-miR397a-5p	3	`......_`	8	85
MIMAT0013997	zma-miR171n-3p	3	`......_`	8	85
MIMAT0013996	zma-miR171m-3p	3	`......_`	8	85
MIMAT0013995	zma-miR171l-3p	3	`......_`	8	85
MIMAT0012569	aqc-miR171d	3	`......_`	8	85
MIMAT0012567	aqc-miR171b	3	`......_`	8	85
MIMAT0012566	aqc-miR171a	3	`......_`	8	85
MIMAT0012565	aqc-miR171f	3	`......_`	8	85
MIMAT0013319	mtr-miR2610b	3	`......_`	8	85
MIMAT0013318	mtr-miR2610a	3	`......_`	8	85
MIMAT0012186	bdi-miR171c-3p	3	`......_`	8	85
MIMAT0012180	bdi-miR397a	3	`......_`	8	85
MIMAT0012174	bdi-miR171a	3	`......_`	8	85
MIMAT0011540	crm-miR-233	1	`_......`	6	85
MIMAT0011359	sbi-miR397-5p	3	`......_`	8	85
MIMAT0011344	sbi-miR171k	3	`......_`	8	85
MIMAT0011343	sbi-miR171j	3	`......_`	8	85
MIMAT0011342	sbi-miR171i	3	`......_`	8	85
MIMAT0011341	sbi-miR171h	3	`......_`	8	85
MIMAT0011340	sbi-miR171g	3	`......_`	8	85
MIMAT0010170	bol-miR171a	1	`_......`	6	85
MIMAT0010165	bra-miR171e	3	`......_`	8	85
MIMAT0010164	bra-miR171d	1	`_......`	6	85
MIMAT0010163	bra-miR171c	1	`_......`	6	85
MIMAT0010162	bra-miR171b	1	`_......`	6	85
MIMAT0010161	bra-miR171a	1	`_......`	6	85
MIMAT0009053	dya-miR-87	1	`_......`	6	85
MIMAT0008982	dwi-miR-87	1	`_......`	6	85
MIMAT0008974	dvi-miR-87-3p	1	`_......`	6	85
MIMAT0008844	dsi-miR-87	1	`_......`	6	85
MIMAT0008773	dse-miR-87	1	`_......`	6	85
MIMAT0008733	dpe-miR-87	1	`_......`	6	85
MIMAT0008662	dmo-miR-87	1	`_......`	6	85
MIMAT0008608	dgr-miR-87	1	`_......`	6	85
MIMAT0008544	der-miR-87	1	`_......`	6	85
MIMAT0008411	dan-miR-87	1	`_......`	6	85
MIMAT0007928	sly-miR397	1	`......_`	6	85
MIMAT0007925	sly-miR171d	1	`_......`	6	85
MIMAT0007923	sly-miR171b	1	`_......`	6	85
MIMAT0007922	sly-miR171a	3	`......_`	8	85
MIMAT0006561	vvi-miR397a	3	`......_`	8	85
MIMAT0006555	vvi-miR171g	1	`_......`	6	85
MIMAT0007599	gga-miR-1707	2	`_......`	7	85
MIMAT0005990	osa-miR1440a	7	`_......`	2	85
MIMAT0005698	vvi-miR171i	3	`......_`	8	85
MIMAT0005696	vvi-miR171f	1	`_......`	6	85
MIMAT0005695	vvi-miR171e	3	`......_`	8	85
MIMAT0005694	vvi-miR171d	3	`......_`	8	85
MIMAT0005693	vvi-miR171c	3	`......_`	8	85
MIMAT0005692	vvi-miR171b	3	`......_`	8	85
MIMAT0005691	vvi-miR171a	3	`......_`	8	85
MIMAT0005610	bna-miR171f	3	`......_`	8	85
MIMAT0005609	bna-miR171e	1	`_......`	6	85
MIMAT0005608	bna-miR171d	1	`_......`	6	85
MIMAT0005607	bna-miR171c	1	`_......`	6	85
MIMAT0005606	bna-miR171b	1	`_......`	6	85
MIMAT0005605	bna-miR171a	1	`_......`	6	85
MIMAT0005601	bna-miR397b	3	`......_`	8	85
MIMAT0005600	bna-miR397a	3	`......_`	8	85
MIMAT0005348	tae-miR171a	3	`......_`	8	85
MIMAT0005223	smo-miR171a	1	`_......`	6	85
MIMAT0004996	pta-miR171	3	`......_`	8	85
MIMAT0004446	bna-miR171g	3	`......_`	8	85
MIMAT0004376	ppt-miR171b	1	`_......`	6	85
MIMAT0011113	mtr-miR171f	1	`_......`	6	85
MIMAT0026456	mtr-miR396a-3p	6	`_......`	1	85
MIMAT0011106	mtr-miR171e-3p	3	`......_`	8	85
MIMAT0011105	mtr-miR171d	3	`......_`	8	85
MIMAT0011083	mtr-miR171c	3	`......_`	8	85
MIMAT0011066	mtr-miR171b	3	`......_`	8	85
MIMAT0003943	ptc-miR171k	3	`......_`	8	85
MIMAT0002039	ptc-miR397b	3	`......_`	8	85
MIMAT0002038	ptc-miR397a	3	`......_`	8	85
MIMAT0001991	ptc-miR171i	3	`......_`	8	85
MIMAT0001990	ptc-miR171h-3p	3	`......_`	8	85
MIMAT0001989	ptc-miR171g-3p	3	`......_`	8	85
MIMAT0001988	ptc-miR171f	3	`......_`	8	85
MIMAT0001987	ptc-miR171e	3	`......_`	8	85
MIMAT0001986	ptc-miR171d	3	`......_`	8	85
MIMAT0001985	ptc-miR171c	3	`......_`	8	85
MIMAT0001984	ptc-miR171b	1	`_......`	6	85
MIMAT0001983	ptc-miR171a-3p	1	`_......`	6	85
MIMAT0001740	zma-miR171i-3p	3	`......_`	8	85
MIMAT0001739	zma-miR171e-3p	3	`......_`	8	85
MIMAT0001738	zma-miR171j-3p	3	`......_`	8	85
MIMAT0001695	zma-miR171f-3p	1	`_......`	6	85
MIMAT0001694	zma-miR171d-3p	3	`......_`	8	85
MIMAT0020923	gma-miR396b-3p	6	`_......`	1	85
MIMAT0001655	mtr-miR171a	3	`......_`	8	85
MIMAT0001462	sbi-miR171a	3	`......_`	8	85
MIMAT0001461	sbi-miR171d	3	`......_`	8	85
MIMAT0001460	sbi-miR171b	3	`......_`	8	85
MIMAT0001386	zma-miR171b-3p	1	`_......`	6	85
MIMAT0001385	zma-miR171a-3p	3	`......_`	8	85
MIMAT0001225	dps-miR-87	1	`_......`	6	85
MIMAT0001085	osa-miR171i-3p	3	`......_`	8	85
MIMAT0001067	osa-miR171f-3p	3	`......_`	8	85
MIMAT0001066	osa-miR171e-3p	3	`......_`	8	85
MIMAT0001065	osa-miR171d-3p	3	`......_`	8	85
MIMAT0001064	osa-miR171c-3p	3	`......_`	8	85
MIMAT0001063	osa-miR171b	3	`......_`	8	85
MIMAT0022868	osa-miR160f-3p	3	`......_`	8	85
MIMAT0000981	osa-miR397b	3	`......_`	8	85
MIMAT0000980	osa-miR397a	3	`......_`	8	85
MIMAT0000947	ath-miR397b	3	`......_`	8	85
MIMAT0000946	ath-miR397a	3	`......_`	8	85
MIMAT0031909	ath-miR396b-3p	6	`_......`	1	85
MIMAT0000921	ath-miR171c-3p	1	`_......`	6	85
MIMAT0000920	ath-miR171b-3p	1	`_......`	6	85
MIMAT0000698	cel-miR-356a	1	`_......`	6	85
MIMAT0000645	osa-miR171a	3	`......_`	8	85
MIMAT0000498	cbr-miR-233	1	`_......`	6	85
MIMAT0000361	dme-miR-87-3p	1	`_......`	6	85
MIMAT0000288	cel-miR-233-3p	1	`_......`	6	85
MIMAT0000202	ath-miR171a-3p	3	`......_`	8	85
MIMAT0000201	ath-miR170-3p	3	`......_`	8	85