Result for your query miRNA sequence
>hpv68-miR-h1
caaaugu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1caaatgt7
MIMAT0018835tca-miR-3871-3p8.......2100
MIMAT0018708tca-miR-3837-5p8.......2100
MIMAT0005502dme-miR-985-3p1.......7100
MIMAT0037018ssc-miR-9800-3p6......_185
MIMAT0036610tch-miR-9771n1_......685
MIMAT0035527bdi-miR530b8......_385
MIMAT0035526bdi-miR530a8......_385
MIMAT0033792pxy-miR-8537b-3p8_......385
MIMAT0033757pxy-miR-85192_......785
MIMAT0033579sma-miR-8437-3p8_......385
MIMAT0033519sma-miR-8407-3p8......_385
MIMAT0033516sma-miR-8406-5p1......_685
MIMAT0033458str-miR-8393-5p8......_385
MIMAT0032753ssa-miR-7552a-3p1_......685
MIMAT0032487ssa-miR-203b-3p3_......885
MIMAT0031544ppe-miR6291c-5p8_......385
MIMAT0031243stu-miR5303h7_......285
MIMAT0030864stu-miR7990a3......_885
MIMAT0030447bta-miR-2284ac1_......685
MIMAT0029550ipu-miR-75546_......185
MIMAT0029299mes-miR530b8......_385
MIMAT0029298mes-miR530a8......_385
MIMAT0029014oan-miR-7432-5p3......_885
MIMAT0028611mdo-miR-7307-3p1......_685
MIMAT0026182cme-miR530a8......_385
MIMAT0026104cme-miR530b8......_385
MIMAT0025521htu-miR5308......_385
MIMAT0024762nta-miR5303b2_......785
MIMAT0024761nta-miR5303a2_......785
MIMAT0027169lus-miR530b8......_385
MIMAT0027162lus-miR530a8......_385
MIMAT0023587nta-miR6020b1_......685
MIMAT0023584nta-miR6020a-5p1_......685
MIMAT0023559tca-miR-6009-5p3......_885
MIMAT0023311osa-miR2873c1......_685
MIMAT0023209gma-miR530e8......_385
MIMAT0023199gma-miR530d8......_385
MIMAT0023197gma-miR530c8......_385
MIMAT0023156mtr-miR5308......_385
MIMAT0022463gma-miR530b8......_385
MIMAT0022272hsa-miR-664b-3p8......_385
MIMAT0022227mtr-miR5561-5p6......_185
MIMAT0022192cel-miR-5550-3p1......_685
MIMAT0022105pti-miR54722_......785
MIMAT0032125gma-miR5374-3p3......_885
MIMAT0021143mtr-miR52102_......785
MIMAT0021003gma-miR530a8......_385
MIMAT0020034sko-miR-4827a1_......685
MIMAT0020447tcc-miR530b8......_385
MIMAT0020446tcc-miR530a8......_385
MIMAT0019787hsa-miR-4694-3p1......_685
MIMAT0018483csi-miR530b8......_385
MIMAT0018482csi-miR530a8......_385
MIMAT0018276gma-miR4352b3_......885
MIMAT0018752tca-miR-3849-5p8_......385
MIMAT0017939aly-miR4248c6_......185
MIMAT0017938aly-miR4248b6_......185
MIMAT0017937aly-miR4248a6_......185
MIMAT0017921aly-miR42328_......385
MIMAT0016828cin-miR-4207-3p8......_385
MIMAT0016719cin-miR-4125-5p8......_385
MIMAT0016709cin-miR-4118-3p3_......885
MIMAT0016336ahy-miR35123......_885
MIMAT0016021ppy-miR-5798......_385
MIMAT0017661aly-miR2112-5p3......_885
MIMAT0015579bmo-miR-3384-5p3_......885
MIMAT0014670hma-miR-3003b-3p3_......885
MIMAT0014668hma-miR-3003a-3p2_......785
MIMAT0012593aqc-miR5308......_385
MIMAT0013399mtr-miR26338_......385
MIMAT0013285mtr-miR25957_......285
MIMAT0012390dps-miR-2564-5p3_......885
MIMAT0011447cel-miR-2216-5p8_......385
MIMAT0012163sme-miR-96b-3p7_......285
MIMAT0012137sme-miR-124d-5p7_......285
MIMAT0011154ath-miR2112-5p3......_885
MIMAT0010118ame-miR-9852_......785
MIMAT0009822nve-miR-2049-5p1......_685
MIMAT0008252ptr-miR-5798......_385
MIMAT0006440mml-miR-5798......_385
MIMAT0005998ptc-miR530b8......_385
MIMAT0005997ptc-miR530a8......_385
MIMAT0007188oan-miR-1392-3p6......_185
MIMAT0026749hsa-miR-513b-3p1_......685
MIMAT0026744hsa-miR-1252-3p1......_685
MIMAT0026740hsa-miR-1250-3p6_......185
MIMAT0005208ppt-miR1077-5p3......_885
MIMAT0003244hsa-miR-579-3p8......_385
MIMAT0006787osa-miR530-5p8......_385
MIMAT0001573mghv-miR-M1-98_......385