RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | caaatgt | 7 | ||
MIMAT0018835 | tca-miR-3871-3p | 8 | ....... | 2 | 100 |
MIMAT0018708 | tca-miR-3837-5p | 8 | ....... | 2 | 100 |
MIMAT0005502 | dme-miR-985-3p | 1 | ....... | 7 | 100 |
MIMAT0037018 | ssc-miR-9800-3p | 6 | ......_ | 1 | 85 |
MIMAT0036610 | tch-miR-9771n | 1 | _...... | 6 | 85 |
MIMAT0035527 | bdi-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0035526 | bdi-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0033792 | pxy-miR-8537b-3p | 8 | _...... | 3 | 85 |
MIMAT0033757 | pxy-miR-8519 | 2 | _...... | 7 | 85 |
MIMAT0033579 | sma-miR-8437-3p | 8 | _...... | 3 | 85 |
MIMAT0033519 | sma-miR-8407-3p | 8 | ......_ | 3 | 85 |
MIMAT0033516 | sma-miR-8406-5p | 1 | ......_ | 6 | 85 |
MIMAT0033458 | str-miR-8393-5p | 8 | ......_ | 3 | 85 |
MIMAT0032753 | ssa-miR-7552a-3p | 1 | _...... | 6 | 85 |
MIMAT0032487 | ssa-miR-203b-3p | 3 | _...... | 8 | 85 |
MIMAT0031544 | ppe-miR6291c-5p | 8 | _...... | 3 | 85 |
MIMAT0031243 | stu-miR5303h | 7 | _...... | 2 | 85 |
MIMAT0030864 | stu-miR7990a | 3 | ......_ | 8 | 85 |
MIMAT0030447 | bta-miR-2284ac | 1 | _...... | 6 | 85 |
MIMAT0029550 | ipu-miR-7554 | 6 | _...... | 1 | 85 |
MIMAT0029299 | mes-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0029298 | mes-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0029014 | oan-miR-7432-5p | 3 | ......_ | 8 | 85 |
MIMAT0028611 | mdo-miR-7307-3p | 1 | ......_ | 6 | 85 |
MIMAT0026182 | cme-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0026104 | cme-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0025521 | htu-miR530 | 8 | ......_ | 3 | 85 |
MIMAT0024762 | nta-miR5303b | 2 | _...... | 7 | 85 |
MIMAT0024761 | nta-miR5303a | 2 | _...... | 7 | 85 |
MIMAT0027169 | lus-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0027162 | lus-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0023587 | nta-miR6020b | 1 | _...... | 6 | 85 |
MIMAT0023584 | nta-miR6020a-5p | 1 | _...... | 6 | 85 |
MIMAT0023559 | tca-miR-6009-5p | 3 | ......_ | 8 | 85 |
MIMAT0023311 | osa-miR2873c | 1 | ......_ | 6 | 85 |
MIMAT0023209 | gma-miR530e | 8 | ......_ | 3 | 85 |
MIMAT0023199 | gma-miR530d | 8 | ......_ | 3 | 85 |
MIMAT0023197 | gma-miR530c | 8 | ......_ | 3 | 85 |
MIMAT0023156 | mtr-miR530 | 8 | ......_ | 3 | 85 |
MIMAT0022463 | gma-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0022272 | hsa-miR-664b-3p | 8 | ......_ | 3 | 85 |
MIMAT0022227 | mtr-miR5561-5p | 6 | ......_ | 1 | 85 |
MIMAT0022192 | cel-miR-5550-3p | 1 | ......_ | 6 | 85 |
MIMAT0022105 | pti-miR5472 | 2 | _...... | 7 | 85 |
MIMAT0032125 | gma-miR5374-3p | 3 | ......_ | 8 | 85 |
MIMAT0021143 | mtr-miR5210 | 2 | _...... | 7 | 85 |
MIMAT0021003 | gma-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0020034 | sko-miR-4827a | 1 | _...... | 6 | 85 |
MIMAT0020447 | tcc-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0020446 | tcc-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0019787 | hsa-miR-4694-3p | 1 | ......_ | 6 | 85 |
MIMAT0018483 | csi-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0018482 | csi-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0018276 | gma-miR4352b | 3 | _...... | 8 | 85 |
MIMAT0018752 | tca-miR-3849-5p | 8 | _...... | 3 | 85 |
MIMAT0017939 | aly-miR4248c | 6 | _...... | 1 | 85 |
MIMAT0017938 | aly-miR4248b | 6 | _...... | 1 | 85 |
MIMAT0017937 | aly-miR4248a | 6 | _...... | 1 | 85 |
MIMAT0017921 | aly-miR4232 | 8 | _...... | 3 | 85 |
MIMAT0016828 | cin-miR-4207-3p | 8 | ......_ | 3 | 85 |
MIMAT0016719 | cin-miR-4125-5p | 8 | ......_ | 3 | 85 |
MIMAT0016709 | cin-miR-4118-3p | 3 | _...... | 8 | 85 |
MIMAT0016336 | ahy-miR3512 | 3 | ......_ | 8 | 85 |
MIMAT0016021 | ppy-miR-579 | 8 | ......_ | 3 | 85 |
MIMAT0017661 | aly-miR2112-5p | 3 | ......_ | 8 | 85 |
MIMAT0015579 | bmo-miR-3384-5p | 3 | _...... | 8 | 85 |
MIMAT0014670 | hma-miR-3003b-3p | 3 | _...... | 8 | 85 |
MIMAT0014668 | hma-miR-3003a-3p | 2 | _...... | 7 | 85 |
MIMAT0012593 | aqc-miR530 | 8 | ......_ | 3 | 85 |
MIMAT0013399 | mtr-miR2633 | 8 | _...... | 3 | 85 |
MIMAT0013285 | mtr-miR2595 | 7 | _...... | 2 | 85 |
MIMAT0012390 | dps-miR-2564-5p | 3 | _...... | 8 | 85 |
MIMAT0011447 | cel-miR-2216-5p | 8 | _...... | 3 | 85 |
MIMAT0012163 | sme-miR-96b-3p | 7 | _...... | 2 | 85 |
MIMAT0012137 | sme-miR-124d-5p | 7 | _...... | 2 | 85 |
MIMAT0011154 | ath-miR2112-5p | 3 | ......_ | 8 | 85 |
MIMAT0010118 | ame-miR-985 | 2 | _...... | 7 | 85 |
MIMAT0009822 | nve-miR-2049-5p | 1 | ......_ | 6 | 85 |
MIMAT0008252 | ptr-miR-579 | 8 | ......_ | 3 | 85 |
MIMAT0006440 | mml-miR-579 | 8 | ......_ | 3 | 85 |
MIMAT0005998 | ptc-miR530b | 8 | ......_ | 3 | 85 |
MIMAT0005997 | ptc-miR530a | 8 | ......_ | 3 | 85 |
MIMAT0007188 | oan-miR-1392-3p | 6 | ......_ | 1 | 85 |
MIMAT0026749 | hsa-miR-513b-3p | 1 | _...... | 6 | 85 |
MIMAT0026744 | hsa-miR-1252-3p | 1 | ......_ | 6 | 85 |
MIMAT0026740 | hsa-miR-1250-3p | 6 | _...... | 1 | 85 |
MIMAT0005208 | ppt-miR1077-5p | 3 | ......_ | 8 | 85 |
MIMAT0003244 | hsa-miR-579-3p | 8 | ......_ | 3 | 85 |
MIMAT0006787 | osa-miR530-5p | 8 | ......_ | 3 | 85 |
MIMAT0001573 | mghv-miR-M1-9 | 8 | _...... | 3 | 85 |