| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | catgaagg | 8 | ||
| MIMAT0033893 | atr-miR8604 | 1 | ........ | 8 | 100 |
| MIMAT0003720 | ebv-miR-BART20-3p | 1 | ........ | 8 | 100 |
| MIMAT0036817 | oha-miR-205b-5p | 7 | _....... | 1 | 87 |
| MIMAT0036815 | oha-miR-205a-5p | 8 | _....... | 2 | 87 |
| MIMAT0035156 | efu-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0033063 | ppc-miR-8364h-5p | 7 | _....... | 1 | 87 |
| MIMAT0032495 | ssa-miR-205b-5p | 8 | _....... | 2 | 87 |
| MIMAT0032492 | ssa-miR-205a-5p | 8 | _....... | 2 | 87 |
| MIMAT0030987 | hsa-miR-8060 | 2 | ......._ | 8 | 87 |
| MIMAT0031185 | stu-miR7984c-3p | 7 | _....... | 1 | 87 |
| MIMAT0030255 | bdi-miR7723b-3p | 1 | _....... | 7 | 87 |
| MIMAT0029460 | ipu-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0028327 | mml-miR-7186-3p | 8 | ......._ | 2 | 87 |
| MIMAT0026263 | ccr-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0023845 | cgr-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0022812 | sha-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0021856 | aca-miR-205b | 8 | _....... | 2 | 87 |
| MIMAT0021855 | aca-miR-205a | 8 | _....... | 2 | 87 |
| MIMAT0019519 | pma-miR-205b | 8 | _....... | 2 | 87 |
| MIMAT0019517 | pma-miR-205a-5p | 8 | _....... | 2 | 87 |
| MIMAT0016323 | ahy-miR160-3p | 2 | ......._ | 8 | 87 |
| MIMAT0015798 | ppy-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0014616 | tgu-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0012962 | eca-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0012749 | mdo-miR-205a | 8 | _....... | 2 | 87 |
| MIMAT0009845 | cfa-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0011142 | xla-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0006236 | mml-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0006866 | oan-miR-205-5p | 8 | _....... | 2 | 87 |
| MIMAT0005072 | ppt-miR902d-3p | 1 | _....... | 7 | 87 |
| MIMAT0003697 | xtr-miR-205a | 8 | _....... | 2 | 87 |
| MIMAT0003622 | xtr-miR-205b | 8 | _....... | 2 | 87 |
| MIMAT0003545 | bta-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002966 | tni-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002965 | fru-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002546 | mne-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002545 | lla-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002544 | ptr-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002543 | ppa-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002542 | age-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002541 | ggo-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0002146 | ssc-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0001280 | dre-miR-205-5p | 8 | _....... | 2 | 87 |
| MIMAT0001184 | gga-miR-205a | 8 | _....... | 2 | 87 |
| MIMAT0001164 | gga-miR-205b | 8 | _....... | 2 | 87 |
| MIMAT0000878 | rno-miR-205 | 8 | _....... | 2 | 87 |
| MIMAT0000266 | hsa-miR-205-5p | 8 | _....... | 2 | 87 |
| MIMAT0000238 | mmu-miR-205-5p | 8 | _....... | 2 | 87 |
| MIMAT0034671 | eca-miR-9121 | 8 | .g...... | 1 | 87 |
| MIMAT0013362 | mtr-miR2628 | 1 | ......a. | 8 | 87 |
| MIMAT0007101 | oan-miR-1422n-5p | 8 | .t...... | 1 | 87 |
| MIMAT0036975 | bta-miR-3533 | 1 | _......_ | 6 | 75 |
| MIMAT0036403 | gma-miR9766 | 3 | __...... | 8 | 75 |
| MIMAT0036397 | gma-miR9761 | 1 | __...... | 6 | 75 |
| MIMAT0036254 | chi-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0035743 | rno-miR-3084c-5p | 3 | __...... | 8 | 75 |
| MIMAT0035741 | rno-miR-3084b-5p | 3 | __...... | 8 | 75 |
| MIMAT0035739 | rno-miR-3084a-5p | 2 | __...... | 7 | 75 |
| MIMAT0035723 | rno-miR-1297 | 7 | ......__ | 2 | 75 |
| MIMAT0035640 | dvi-miR-9550-5p | 6 | ......__ | 1 | 75 |
| MIMAT0034902 | efu-miR-9270 | 3 | __...... | 8 | 75 |
| MIMAT0034641 | eca-miR-9095 | 1 | __...... | 6 | 75 |
| MIMAT0034609 | eca-miR-9064 | 2 | __...... | 7 | 75 |
| MIMAT0034524 | eca-miR-8987 | 1 | __...... | 6 | 75 |
| MIMAT0033573 | sma-miR-8434-3p | 8 | ......__ | 3 | 75 |
| MIMAT0033561 | sma-miR-8428-3p | 7 | ......__ | 2 | 75 |
| MIMAT0033371 | str-miR-252b-3p | 7 | __...... | 2 | 75 |
| MIMAT0033284 | ppc-miR-8364t-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033270 | ppc-miR-8364s-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033262 | ppc-miR-8364r-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033260 | ppc-miR-8364e-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033216 | ppc-miR-8364i-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033188 | ppc-miR-8364m-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033176 | ppc-miR-8364a-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033161 | ppc-miR-8364w-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033119 | ppc-miR-8364g-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033109 | ppc-miR-8364f-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033081 | ppc-miR-8364b-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033045 | ppc-miR-8364n-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033030 | ppc-miR-8364c-5p | 7 | _......_ | 2 | 75 |
| MIMAT0033026 | ppc-miR-8364j-5p | 7 | _......_ | 2 | 75 |
| MIMAT0032910 | ppc-miR-8364d-5p | 8 | _......_ | 3 | 75 |
| MIMAT0031524 | ppe-miR8122-3p | 1 | __...... | 6 | 75 |
| MIMAT0030671 | prd-miR-7917-3p | 1 | __...... | 6 | 75 |
| MIMAT0030512 | prd-miR-7878-5p | 1 | __...... | 6 | 75 |
| MIMAT0030486 | prd-miR-7871-5p | 1 | __...... | 6 | 75 |
| MIMAT0030412 | hsa-miR-7843-3p | 1 | _......_ | 6 | 75 |
| MIMAT0029272 | mes-miR395e | 2 | __...... | 7 | 75 |
| MIMAT0028530 | mdo-miR-7278-5p | 2 | __...... | 7 | 75 |
| MIMAT0028480 | mdo-miR-7257-5p | 2 | ......__ | 7 | 75 |
| MIMAT0028272 | mml-miR-7169-5p | 6 | __...... | 1 | 75 |
| MIMAT0028218 | hsa-miR-7154-5p | 6 | ......__ | 1 | 75 |
| MIMAT0028218 | hsa-miR-7154-5p | 3 | ......__ | 8 | 75 |
| MIMAT0028204 | dre-miR-7146-3p | 1 | __...... | 6 | 75 |
| MIMAT0028002 | mmu-miR-7049-5p | 3 | __...... | 8 | 75 |
| MIMAT0027930 | mmu-miR-7013-5p | 2 | _......_ | 7 | 75 |
| MIMAT0027628 | hsa-miR-6864-5p | 2 | __...... | 7 | 75 |
| MIMAT0027577 | hsa-miR-6837-3p | 6 | __...... | 1 | 75 |
| MIMAT0025731 | gga-miR-6635-5p | 2 | __...... | 7 | 75 |
| MIMAT0025378 | ssc-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0024925 | gma-miR395m | 1 | _......_ | 6 | 75 |
| MIMAT0024924 | gma-miR395l | 1 | _......_ | 6 | 75 |
| MIMAT0024923 | gma-miR395k | 1 | _......_ | 6 | 75 |
| MIMAT0024922 | gma-miR395j | 1 | _......_ | 6 | 75 |
| MIMAT0024921 | gma-miR395i | 1 | _......_ | 6 | 75 |
| MIMAT0024920 | gma-miR395h | 1 | _......_ | 6 | 75 |
| MIMAT0024599 | hsa-miR-6126 | 2 | __...... | 7 | 75 |
| MIMAT0023476 | hco-miR-5969 | 8 | _......_ | 3 | 75 |
| MIMAT0022432 | ath-miR5659 | 3 | _......_ | 8 | 75 |
| MIMAT0022121 | osa-miR5488 | 1 | __...... | 6 | 75 |
| MIMAT0022681 | amg-miR2086 | 3 | ......__ | 8 | 75 |
| MIMAT0022676 | aau-miR2086 | 3 | ......__ | 8 | 75 |
| MIMAT0022000 | aca-miR-5394-5p | 3 | ......__ | 8 | 75 |
| MIMAT0021618 | gma-miR5377 | 2 | __...... | 7 | 75 |
| MIMAT0021495 | asu-miR-124-5p | 8 | __...... | 3 | 75 |
| MIMAT0021398 | rmi-miR-5325 | 2 | __...... | 7 | 75 |
| MIMAT0021359 | mtr-miR5293 | 2 | _......_ | 7 | 75 |
| MIMAT0019238 | oar-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0018494 | csi-miR3952 | 1 | __...... | 6 | 75 |
| MIMAT0017995 | hsa-miR-3616-5p | 1 | _......_ | 6 | 75 |
| MIMAT0016745 | cin-miR-4143-3p | 1 | ......__ | 6 | 75 |
| MIMAT0016647 | cin-miR-4079-5p | 8 | _......_ | 3 | 75 |
| MIMAT0017873 | rno-miR-3583-5p | 3 | ......__ | 8 | 75 |
| MIMAT0016384 | gga-miR-3533 | 1 | _......_ | 6 | 75 |
| MIMAT0015914 | ppy-miR-493 | 1 | __...... | 6 | 75 |
| MIMAT0014898 | mmu-miR-3088-3p | 6 | ......__ | 1 | 75 |
| MIMAT0014876 | mmu-miR-3084-5p | 3 | __...... | 8 | 75 |
| MIMAT0013163 | eca-miR-493b | 1 | __...... | 6 | 75 |
| MIMAT0012870 | hvt-miR-H16-5p | 6 | ......__ | 1 | 75 |
| MIMAT0012575 | aqc-miR395a | 2 | __...... | 7 | 75 |
| MIMAT0012574 | aqc-miR395b | 2 | __...... | 7 | 75 |
| MIMAT0011579 | crm-miR-250-5p | 6 | __...... | 1 | 75 |
| MIMAT0010027 | mtr-miR2086-3p | 3 | ......__ | 8 | 75 |
| MIMAT0009823 | nve-miR-2049-3p | 8 | ......__ | 3 | 75 |
| MIMAT0009333 | bta-miR-493 | 1 | __...... | 6 | 75 |
| MIMAT0009094 | dya-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0009050 | dwi-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008952 | dvi-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008897 | dsi-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008806 | dse-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008753 | dpe-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008675 | dmo-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008600 | dgr-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008551 | der-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0008406 | dan-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0007960 | ptr-miR-1206 | 8 | ......__ | 3 | 75 |
| MIMAT0006711 | cfa-miR-493 | 1 | __...... | 6 | 75 |
| MIMAT0006355 | mml-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0007187 | oan-miR-1392-5p | 8 | _......_ | 3 | 75 |
| MIMAT0005870 | hsa-miR-1206 | 8 | ......__ | 3 | 75 |
| MIMAT0005154 | ppt-miR1043-5p | 6 | __...... | 1 | 75 |
| MIMAT0005092 | ppt-miR1222e | 2 | __...... | 7 | 75 |
| MIMAT0005090 | ppt-miR1222c | 2 | __...... | 7 | 75 |
| MIMAT0005089 | ppt-miR1222b | 2 | __...... | 7 | 75 |
| MIMAT0004888 | mmu-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0004057 | osa-miR814c | 8 | _......_ | 3 | 75 |
| MIMAT0004056 | osa-miR814b | 8 | _......_ | 3 | 75 |
| MIMAT0004055 | osa-miR814a | 8 | _......_ | 3 | 75 |
| MIMAT0012117 | sme-miR-747-3p | 6 | _......_ | 1 | 75 |
| MIMAT0003872 | osa-miR395o | 1 | _......_ | 6 | 75 |
| MIMAT0003868 | mtr-miR395o | 1 | _......_ | 6 | 75 |
| MIMAT0003867 | mtr-miR395n | 1 | _......_ | 6 | 75 |
| MIMAT0003866 | mtr-miR395m | 1 | _......_ | 6 | 75 |
| MIMAT0003865 | mtr-miR395l | 1 | _......_ | 6 | 75 |
| MIMAT0003863 | mtr-miR395j | 1 | _......_ | 6 | 75 |
| MIMAT0003862 | mtr-miR395i | 1 | _......_ | 6 | 75 |
| MIMAT0003861 | mtr-miR395h | 1 | _......_ | 6 | 75 |
| MIMAT0003859 | mtr-miR395f | 1 | _......_ | 6 | 75 |
| MIMAT0003858 | mtr-miR395e | 1 | _......_ | 6 | 75 |
| MIMAT0003857 | mtr-miR395d | 1 | _......_ | 6 | 75 |
| MIMAT0003856 | mtr-miR395c | 1 | _......_ | 6 | 75 |
| MIMAT0003917 | ppt-miR1222a | 2 | __...... | 7 | 75 |
| MIMAT0003502 | mmu-miR-712-5p | 8 | __...... | 3 | 75 |
| MIMAT0003448 | rlcv-miR-rL1-16-3p | 1 | ......__ | 6 | 75 |
| MIMAT0003191 | rno-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0003161 | hsa-miR-493-3p | 1 | __...... | 6 | 75 |
| MIMAT0002021 | ptc-miR395a | 2 | __...... | 7 | 75 |
| MIMAT0001757 | sbi-miR395f | 1 | _......_ | 6 | 75 |
| MIMAT0001649 | mtr-miR395b | 1 | _......_ | 6 | 75 |
| MIMAT0001648 | mtr-miR395a | 1 | _......_ | 6 | 75 |
| MIMAT0001252 | dps-miR-288 | 7 | ......__ | 2 | 75 |
| MIMAT0000363 | dme-miR-288-3p | 7 | ......__ | 2 | 75 |
| MIMAT0020339 | cel-miR-250-5p | 6 | __...... | 1 | 75 |
