Result for your query miRNA sequence
>tumv-miR-s40
ccaugaau

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ccatgaat8
MIMAT0035723rno-miR-12977_.......187
MIMAT0033561sma-miR-8428-3p7_.......187
MIMAT0030987hsa-miR-80601......._787
MIMAT0022000aca-miR-5394-5p2......._887
MIMAT0009823nve-miR-2049-3p8_.......287
MIMAT0030705prd-miR-7928-3p1.a......887
MIMAT0009396mmu-miR-1933-5p8......c.187
MIMAT0005992osa-miR14428.t......187
MIMAT0036391gma-miR5380c1__......675
MIMAT0035640dvi-miR-9550-5p6_......_175
MIMAT0035347gsa-miR-9400-3p7__......275
MIMAT0035269gsa-miR-281-3p8......__375
MIMAT0035206dme-miR-9371-3p7__......275
MIMAT0034759eca-miR-91797......__275
MIMAT0034249gra-miR7492f1......__675
MIMAT0034168gra-miR7494d6......__175
MIMAT0034115gra-miR7492e1......__675
MIMAT0034048gra-miR86772__......775
MIMAT0033968esi-miR8623d8......__375
MIMAT0033960esi-miR8623a8......__375
MIMAT0033893atr-miR86041_......_675
MIMAT0033804pxy-miR-2818......__375
MIMAT0033593sma-miR-281-3p8......__375
MIMAT0033573sma-miR-8434-3p8_......_375
MIMAT0033405str-miR-47-3p8......__375
MIMAT0033163ppc-miR-8314-5p8__......375
MIMAT0033058ppc-miR-8279-3p8__......375
MIMAT0032859ppc-miR-8214-3p8......__375
MIMAT0031661bbe-miR-281-3p8......__375
MIMAT0030910stu-miR8014-3p1__......675
MIMAT0030599prd-miR-7900-3p7......__275
MIMAT0030581prd-miR-7895-3p6__......175
MIMAT0030509prd-miR-46-3p8......__375
MIMAT0030438bta-miR-664b7__......275
MIMAT0032248rgl-miR7805-3p7__......275
MIMAT0029744cbn-miR-478......__375
MIMAT0029743cbn-miR-468......__375
MIMAT0029336lja-miR75216......__175
MIMAT0028696mdo-miR-7343-5p6......__175
MIMAT0028480mdo-miR-7257-5p2_......_775
MIMAT0028327mml-miR-7186-3p8_......_375
MIMAT0028218hsa-miR-7154-5p6_......_175
MIMAT0028218hsa-miR-7154-5p3_......_875
MIMAT0027721mmu-miR-6910-3p6......__175
MIMAT0025659gga-miR-6576-5p6......__175
MIMAT0023995cgr-miR-664-3p7__......275
MIMAT0023592sly-miR60233......__875
MIMAT0023591stu-miR60233......__875
MIMAT0023327hco-miR-468......__375
MIMAT0023106tur-miR-279-5p1__......675
MIMAT0023047tur-miR-281-3p8......__375
MIMAT0022466gma-miR56783......__875
MIMAT0022179osa-miR55432__......775
MIMAT0022681amg-miR20863_......_875
MIMAT0022676aau-miR20863_......_875
MIMAT0021458asu-miR-46-3p8......__375
MIMAT0021177mtr-miR52196......__175
MIMAT0020527ath-miR50227......__275
MIMAT0019907hsa-miR-4760-3p8__......375
MIMAT0019535pma-miR-281a8......__375
MIMAT0018415nlo-miR-2818......__375
MIMAT0018388ngi-miR-2817......__275
MIMAT0018524ame-miR-37546......__175
MIMAT0016810cin-miR-4192-3p6......__175
MIMAT0016745cin-miR-4143-3p1_......_675
MIMAT0017873rno-miR-3583-5p3_......_875
MIMAT0016323ahy-miR160-3p2_......_775
MIMAT0016094ppy-miR-6647__......275
MIMAT0015658nvi-miR-2818......__375
MIMAT0017628aly-miR842-3p6......__175
MIMAT0015574bmo-miR-3381-3p8__......375
MIMAT0015511bmo-miR-33242......__775
MIMAT0015421bmo-miR-32383__......875
MIMAT0014898mmu-miR-3088-3p6_......_175
MIMAT0014359cqu-miR-281-3p8......__375
MIMAT0014232aae-miR-281-3p8......__375
MIMAT0014134api-miR-2818......__375
MIMAT0014123bma-miR-2818......__375
MIMAT0013907ssc-miR-664-3p7__......275
MIMAT0013192eca-miR-6647__......275
MIMAT0012870hvt-miR-H16-5p6_......_175
MIMAT0012800ptr-miR-664b7__......275
MIMAT0012774mmu-miR-664-3p7__......275
MIMAT0012712hvt-miR-H3-5p8......__375
MIMAT0012655dpu-miR-2818......__375
MIMAT0013516hsa-miR-2681-3p8......__375
MIMAT0013362mtr-miR26281_......_675
MIMAT0011655ppc-miR-468......__375
MIMAT0011598crm-miR-46-3p8......__375
MIMAT0011542crm-miR-478......__375
MIMAT0012140sme-miR-1993-5p3__......875
MIMAT0010141lmi-miR-281-3p8......__375
MIMAT0010027mtr-miR2086-3p3_......_875
MIMAT0009641sko-miR-2818......__375
MIMAT0009595lgi-miR-281-3p8......__375
MIMAT0009540cte-miR-2818......__375
MIMAT0009500bfl-miR-2818......__375
MIMAT0009094dya-miR-2887_......_275
MIMAT0009061dya-miR-281-3p8......__375
MIMAT0009050dwi-miR-2887_......_275
MIMAT0008995dwi-miR-281-3p8......__375
MIMAT0008952dvi-miR-2887_......_275
MIMAT0008927dvi-miR-281-3p8......__375
MIMAT0008906dsi-miR-281-3p8......__375
MIMAT0008897dsi-miR-2887_......_275
MIMAT0008806dse-miR-2887_......_275
MIMAT0008783dse-miR-281-3p8......__375
MIMAT0008753dpe-miR-2887_......_275
MIMAT0008728dpe-miR-281-3p8......__375
MIMAT0008675dmo-miR-2887_......_275
MIMAT0008642dmo-miR-281-3p8......__375
MIMAT0008600dgr-miR-2887_......_275
MIMAT0008588dgr-miR-281-3p8......__375
MIMAT0008551der-miR-2887_......_275
MIMAT0008502der-miR-281-3p8......__375
MIMAT0008429dan-miR-281-3p8......__375
MIMAT0008406dan-miR-2887_......_275
MIMAT0008385tca-miR-281-3p8......__375
MIMAT0008311ptr-miR-664a7__......275
MIMAT0007960ptr-miR-12068_......_375
MIMAT0006503mml-miR-6647__......275
MIMAT0007694gga-miR-17828__......375
MIMAT0007453gga-miR-1591-5p8__......375
MIMAT0006138csa-miR-2818......__375
MIMAT0006114cin-miR-281-3p8......__375
MIMAT0015249cin-let-7b-3p2......__775
MIMAT0006085odi-miR-2818......__375
MIMAT0005949hsa-miR-664a-3p7__......275
MIMAT0005870hsa-miR-12068_......_375
MIMAT0005268smo-miR11112......__775
MIMAT0004358ppt-miR4193__......875
MIMAT0004313ath-miR865-5p1__......675
MIMAT0004264ath-miR8426......__175
MIMAT0004013sme-miR-281-3p8......__375
MIMAT0003720ebv-miR-BART20-3p1_......_675
MIMAT0003448rlcv-miR-rL1-16-3p1_......_675
MIMAT0003382rno-miR-664-3p7__......275
MIMAT0001513aga-miR-2818......__375
MIMAT0001483ame-miR-2818......__375
MIMAT0001335osa-miR4193__......875
MIMAT0001327ath-miR4193__......875
MIMAT0001252dps-miR-2887_......_275
MIMAT0001245dps-miR-2818......__375
MIMAT0000472cbr-miR-478......__375
MIMAT0000471cbr-miR-468......__375
MIMAT0000363dme-miR-288-3p7_......_275
MIMAT0000345dme-miR-281-3p8......__375
MIMAT0000018cel-miR-47-3p8......__375
MIMAT0000017cel-miR-46-3p8......__375