RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | cctgtgg | 7 | ||
MIMAT0037182 | ata-miR396b-5p | 8 | ....... | 2 | 100 |
MIMAT0037160 | ata-miR396d-5p | 8 | ....... | 2 | 100 |
MIMAT0037090 | ata-miR396a-5p | 8 | ....... | 2 | 100 |
MIMAT0036274 | chi-miR-543-5p | 2 | ....... | 8 | 100 |
MIMAT0035961 | chi-miR-140-3p | 8 | ....... | 2 | 100 |
MIMAT0033938 | atr-miR396a | 8 | ....... | 2 | 100 |
MIMAT0029885 | mmu-miR-7682-3p | 1 | ....... | 7 | 100 |
MIMAT0029417 | ipu-miR-140 | 8 | ....... | 2 | 100 |
MIMAT0025707 | gga-miR-6612-5p | 8 | ....... | 2 | 100 |
MIMAT0025435 | pol-miR-140-3p | 8 | ....... | 2 | 100 |
MIMAT0024081 | ggo-miR-140 | 8 | ....... | 2 | 100 |
MIMAT0023768 | cgr-miR-140-3p | 8 | ....... | 2 | 100 |
MIMAT0022778 | sha-miR-140 | 8 | ....... | 2 | 100 |
MIMAT0022553 | ola-miR-140-3p | 8 | ....... | 2 | 100 |
MIMAT0020700 | bdi-miR396b-5p | 8 | ....... | 2 | 100 |
MIMAT0020686 | bdi-miR396a-5p | 8 | ....... | 2 | 100 |
MIMAT0019271 | oar-miR-543-5p | 2 | ....... | 8 | 100 |
MIMAT0018369 | far-miR396 | 8 | ....... | 2 | 100 |
MIMAT0013835 | osa-miR396d | 8 | ....... | 2 | 100 |
MIMAT0013834 | osa-miR396h | 8 | ....... | 2 | 100 |
MIMAT0013833 | osa-miR396g | 8 | ....... | 2 | 100 |
MIMAT0006689 | cfa-miR-140 | 8 | ....... | 2 | 100 |
MIMAT0026819 | mml-miR-134-3p | 1 | ....... | 7 | 100 |
MIMAT0003423 | ebv-miR-BART12 | 2 | ....... | 8 | 100 |
MIMAT0001601 | osa-miR396e-5p | 8 | ....... | 2 | 100 |
MIMAT0003722 | gga-miR-140-3p | 7 | ....... | 1 | 100 |
MIMAT0026481 | hsa-miR-134-3p | 1 | ....... | 7 | 100 |
MIMAT0037193 | ata-miR528-3p | 1 | ......_ | 6 | 85 |
MIMAT0037170 | ata-miR396c-5p | 8 | _...... | 3 | 85 |
MIMAT0037168 | ata-miR396e-5p | 8 | _...... | 3 | 85 |
MIMAT0036941 | oha-miR-5470 | 6 | ......_ | 1 | 85 |
MIMAT0036920 | oha-miR-383-3p | 6 | _...... | 1 | 85 |
MIMAT0036720 | oha-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0035852 | bra-miR396-5p | 8 | _...... | 3 | 85 |
MIMAT0035783 | tae-miR9669-5p | 3 | _...... | 8 | 85 |
MIMAT0035481 | sly-miR396b | 8 | _...... | 3 | 85 |
MIMAT0035455 | sly-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0034770 | efu-miR-9190 | 3 | ......_ | 8 | 85 |
MIMAT0034760 | eca-miR-6529 | 1 | ......_ | 6 | 85 |
MIMAT0034382 | cfa-miR-7180 | 1 | _...... | 6 | 85 |
MIMAT0034335 | cfa-miR-8842 | 3 | _...... | 8 | 85 |
MIMAT0034303 | cfa-miR-8813 | 6 | ......_ | 1 | 85 |
MIMAT0034278 | cfa-miR-6529 | 1 | ......_ | 6 | 85 |
MIMAT0033967 | esi-miR8629 | 6 | _...... | 1 | 85 |
MIMAT0033942 | atr-miR396e | 8 | _...... | 3 | 85 |
MIMAT0033940 | atr-miR396c | 8 | _...... | 3 | 85 |
MIMAT0033939 | atr-miR396b | 8 | _...... | 3 | 85 |
MIMAT0032360 | ssa-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0031858 | lus-miR396e | 8 | _...... | 3 | 85 |
MIMAT0031822 | cpa-miR396 | 8 | _...... | 3 | 85 |
MIMAT0031523 | ppe-miR8122-5p | 8 | _...... | 3 | 85 |
MIMAT0031495 | ppe-miR396b | 8 | _...... | 3 | 85 |
MIMAT0031494 | ppe-miR396a | 8 | _...... | 3 | 85 |
MIMAT0031404 | mmu-miR-497b | 8 | _...... | 3 | 85 |
MIMAT0031335 | stu-miR396-5p | 8 | _...... | 3 | 85 |
MIMAT0031154 | ama-miR396-5p | 8 | _...... | 3 | 85 |
MIMAT0029878 | mmu-miR-3620-5p | 1 | _...... | 6 | 85 |
MIMAT0029278 | mes-miR396f | 8 | _...... | 3 | 85 |
MIMAT0029277 | mes-miR396e | 8 | _...... | 3 | 85 |
MIMAT0029276 | mes-miR396d | 8 | _...... | 3 | 85 |
MIMAT0029275 | mes-miR396c | 8 | _...... | 3 | 85 |
MIMAT0029274 | mes-miR396b | 8 | _...... | 3 | 85 |
MIMAT0029273 | mes-miR396a | 8 | _...... | 3 | 85 |
MIMAT0029110 | gga-miR-7478-5p | 3 | ......_ | 8 | 85 |
MIMAT0029089 | gga-miR-7467-3p | 8 | _...... | 3 | 85 |
MIMAT0029038 | gga-miR-7442-5p | 6 | ......_ | 1 | 85 |
MIMAT0028824 | mdo-miR-7384-5p | 3 | ......_ | 8 | 85 |
MIMAT0028678 | mdo-miR-7335-5p | 3 | _...... | 8 | 85 |
MIMAT0028330 | mml-miR-7188-5p | 2 | _...... | 7 | 85 |
MIMAT0028326 | mml-miR-7186-5p | 1 | _...... | 6 | 85 |
MIMAT0028315 | mml-miR-6529-3p | 1 | ......_ | 6 | 85 |
MIMAT0026221 | ccr-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0026147 | cme-miR396d | 8 | _...... | 3 | 85 |
MIMAT0026146 | cme-miR396c | 8 | _...... | 3 | 85 |
MIMAT0026145 | cme-miR396b | 8 | _...... | 3 | 85 |
MIMAT0026106 | cme-miR396a | 8 | _...... | 3 | 85 |
MIMAT0025993 | mdm-miR396e | 8 | _...... | 3 | 85 |
MIMAT0025992 | mdm-miR396d | 8 | _...... | 3 | 85 |
MIMAT0025991 | mdm-miR396c | 8 | _...... | 3 | 85 |
MIMAT0025990 | mdm-miR396b | 8 | _...... | 3 | 85 |
MIMAT0025989 | mdm-miR396a | 8 | _...... | 3 | 85 |
MIMAT0028125 | hsa-miR-7114-5p | 2 | _...... | 7 | 85 |
MIMAT0028011 | mmu-miR-7053-3p | 3 | ......_ | 8 | 85 |
MIMAT0027894 | mmu-miR-6996-5p | 8 | ......_ | 3 | 85 |
MIMAT0027886 | mmu-miR-6992-5p | 3 | ......_ | 8 | 85 |
MIMAT0027523 | hsa-miR-6811-3p | 3 | ......_ | 8 | 85 |
MIMAT0027436 | hsa-miR-6768-5p | 8 | ......_ | 3 | 85 |
MIMAT0025588 | mmu-miR-6541 | 6 | ......_ | 1 | 85 |
MIMAT0025287 | hbr-miR396b | 8 | _...... | 3 | 85 |
MIMAT0024825 | hvu-miR6199 | 6 | _...... | 1 | 85 |
MIMAT0024710 | nta-miR396c | 8 | _...... | 3 | 85 |
MIMAT0024709 | nta-miR396b | 8 | _...... | 3 | 85 |
MIMAT0024708 | nta-miR396a | 8 | _...... | 3 | 85 |
MIMAT0027237 | lus-miR396d | 8 | _...... | 3 | 85 |
MIMAT0027213 | lus-miR396c | 8 | _...... | 3 | 85 |
MIMAT0027212 | lus-miR396b | 8 | _...... | 3 | 85 |
MIMAT0027207 | lus-miR396a | 8 | _...... | 3 | 85 |
MIMAT0024531 | cca-miR396b | 8 | _...... | 3 | 85 |
MIMAT0024529 | cca-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0023688 | ame-miR-6047b | 8 | ......_ | 3 | 85 |
MIMAT0023671 | ame-miR-6047a | 7 | _...... | 2 | 85 |
MIMAT0023536 | dpr-miR396 | 8 | _...... | 3 | 85 |
MIMAT0032132 | gma-miR396k-5p | 8 | _...... | 3 | 85 |
MIMAT0023063 | tur-miR-5732-3p | 8 | _...... | 3 | 85 |
MIMAT0022517 | ssl-miR396 | 8 | _...... | 3 | 85 |
MIMAT0022340 | cin-miR-5606-3p | 3 | ......_ | 8 | 85 |
MIMAT0022107 | pti-miR5474 | 3 | ......_ | 8 | 85 |
MIMAT0022680 | amg-miR396 | 8 | _...... | 3 | 85 |
MIMAT0022674 | aau-miR396 | 8 | _...... | 3 | 85 |
MIMAT0022103 | aca-miR-5470 | 6 | ......_ | 1 | 85 |
MIMAT0021766 | aca-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0021669 | gma-miR396i-5p | 8 | _...... | 3 | 85 |
MIMAT0021668 | gma-miR396h | 7 | _...... | 2 | 85 |
MIMAT0020295 | ssp-miR396 | 8 | _...... | 3 | 85 |
MIMAT0020683 | bdi-miR396e-5p | 8 | _...... | 3 | 85 |
MIMAT0020676 | bdi-miR396c-5p | 8 | _...... | 3 | 85 |
MIMAT0020671 | bdi-miR396d-5p | 8 | _...... | 3 | 85 |
MIMAT0027045 | bdi-miR528-3p | 1 | ......_ | 6 | 85 |
MIMAT0021040 | hsa-miR-5008-3p | 1 | ......_ | 6 | 85 |
MIMAT0020431 | tcc-miR396e | 8 | _...... | 3 | 85 |
MIMAT0020429 | tcc-miR396c | 8 | _...... | 3 | 85 |
MIMAT0020428 | tcc-miR396b | 8 | _...... | 3 | 85 |
MIMAT0020427 | tcc-miR396a | 8 | _...... | 3 | 85 |
MIMAT0019797 | hsa-miR-4700-3p | 6 | ......_ | 1 | 85 |
MIMAT0020966 | bcy-miR396b | 8 | _...... | 3 | 85 |
MIMAT0020965 | bcy-miR396a | 8 | _...... | 3 | 85 |
MIMAT0020962 | bgy-miR396b | 8 | _...... | 3 | 85 |
MIMAT0020961 | bgy-miR396a | 8 | _...... | 3 | 85 |
MIMAT0018956 | hsa-miR-4438 | 6 | ......_ | 1 | 85 |
MIMAT0018464 | csi-miR396b | 8 | _...... | 3 | 85 |
MIMAT0018463 | csi-miR396a | 8 | _...... | 3 | 85 |
MIMAT0018345 | gma-miR396e | 8 | _...... | 3 | 85 |
MIMAT0018826 | tca-miR-3867-5p | 6 | _...... | 1 | 85 |
MIMAT0018722 | tca-miR-3839-5p | 6 | ......_ | 1 | 85 |
MIMAT0018152 | pab-miR396a | 8 | _...... | 3 | 85 |
MIMAT0017972 | ssc-miR-383 | 6 | _...... | 1 | 85 |
MIMAT0017971 | ssc-miR-146a-3p | 1 | ......_ | 6 | 85 |
MIMAT0016891 | hsa-miR-4265 | 1 | _...... | 6 | 85 |
MIMAT0016873 | hsa-miR-4322 | 1 | _...... | 6 | 85 |
MIMAT0016869 | hsa-miR-4318 | 3 | _...... | 8 | 85 |
MIMAT0016618 | cin-miR-4065-5p | 3 | _...... | 8 | 85 |
MIMAT0016414 | cin-miR-196-3p | 6 | _...... | 1 | 85 |
MIMAT0017826 | rno-miR-3558-3p | 2 | _...... | 7 | 85 |
MIMAT0015941 | ppy-miR-513c | 8 | ......_ | 3 | 85 |
MIMAT0015938 | ppy-miR-513a-5p | 8 | ......_ | 3 | 85 |
MIMAT0015764 | ppy-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0017617 | aly-miR834-5p | 7 | _...... | 2 | 85 |
MIMAT0017559 | aly-miR396b-5p | 8 | _...... | 3 | 85 |
MIMAT0017557 | aly-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0015523 | bmo-miR-3336 | 2 | _...... | 7 | 85 |
MIMAT0015481 | bmo-miR-3294 | 7 | _...... | 2 | 85 |
MIMAT0014915 | mmu-miR-3097-5p | 6 | ......_ | 1 | 85 |
MIMAT0014860 | mmu-miR-3076-5p | 6 | ......_ | 1 | 85 |
MIMAT0014823 | mmu-miR-3057-3p | 8 | _...... | 3 | 85 |
MIMAT0014642 | tgu-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0026989 | tgu-miR-383-3p | 6 | _...... | 1 | 85 |
MIMAT0014192 | rco-miR396 | 8 | _...... | 3 | 85 |
MIMAT0014078 | ccl-miR396 | 8 | _...... | 3 | 85 |
MIMAT0015363 | zma-miR528b-3p | 1 | ......_ | 6 | 85 |
MIMAT0015362 | zma-miR528a-3p | 1 | ......_ | 6 | 85 |
MIMAT0014017 | zma-miR396h | 8 | _...... | 3 | 85 |
MIMAT0014016 | zma-miR396g-5p | 8 | _...... | 3 | 85 |
MIMAT0014015 | zma-miR396f-5p | 8 | _...... | 3 | 85 |
MIMAT0014014 | zma-miR396e-5p | 8 | _...... | 3 | 85 |
MIMAT0012927 | eca-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0026937 | mdo-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0012577 | aqc-miR396b | 8 | _...... | 3 | 85 |
MIMAT0012576 | aqc-miR396a | 8 | _...... | 3 | 85 |
MIMAT0011358 | sbi-miR396e | 8 | _...... | 3 | 85 |
MIMAT0011357 | sbi-miR396d | 8 | _...... | 3 | 85 |
MIMAT0010088 | lja-miR396 | 8 | _...... | 3 | 85 |
MIMAT0010079 | gma-miR396c | 8 | _...... | 3 | 85 |
MIMAT0010077 | zma-miR396d | 8 | _...... | 3 | 85 |
MIMAT0010076 | zma-miR396c | 8 | _...... | 3 | 85 |
MIMAT0009693 | aqu-miR-2017-3p | 3 | ......_ | 8 | 85 |
MIMAT0006560 | vvi-miR396c | 8 | _...... | 3 | 85 |
MIMAT0026824 | mml-miR-146a-3p | 1 | ......_ | 6 | 85 |
MIMAT0006198 | mml-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0007642 | gga-miR-1739 | 6 | ......_ | 1 | 85 |
MIMAT0007600 | gga-miR-1813 | 3 | _...... | 8 | 85 |
MIMAT0007531 | gga-miR-1652 | 3 | ......_ | 8 | 85 |
MIMAT0007337 | gga-miR-1459 | 3 | ......_ | 8 | 85 |
MIMAT0007336 | gga-miR-1458 | 3 | ......_ | 8 | 85 |
MIMAT0006813 | oan-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0005786 | pbi-miR-513c | 8 | ......_ | 3 | 85 |
MIMAT0005784 | pbi-miR-513a | 8 | ......_ | 3 | 85 |
MIMAT0005776 | ptr-miR-513a | 8 | ......_ | 3 | 85 |
MIMAT0005768 | mml-miR-513a | 8 | ......_ | 3 | 85 |
MIMAT0005760 | ssy-miR-513a | 8 | ......_ | 3 | 85 |
MIMAT0005726 | vvi-miR396d | 8 | _...... | 3 | 85 |
MIMAT0005725 | vvi-miR396b | 8 | _...... | 3 | 85 |
MIMAT0005724 | vvi-miR396a | 8 | _...... | 3 | 85 |
MIMAT0005437 | cre-miR1159.1 | 8 | _...... | 3 | 85 |
MIMAT0004999 | pta-miR396 | 8 | _...... | 3 | 85 |
MIMAT0004448 | bna-miR396a | 8 | _...... | 3 | 85 |
MIMAT0005819 | ghr-miR396b | 8 | _...... | 3 | 85 |
MIMAT0005818 | ghr-miR396a | 8 | _...... | 3 | 85 |
MIMAT0011108 | mtr-miR396b-5p | 8 | _...... | 3 | 85 |
MIMAT0011107 | mtr-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0003789 | bta-miR-140 | 8 | _...... | 3 | 85 |
MIMAT0026631 | gga-miR-383-3p | 6 | _...... | 1 | 85 |
MIMAT0017197 | rno-miR-383-3p | 6 | _...... | 1 | 85 |
MIMAT0022926 | osa-miR528-3p | 1 | ......_ | 6 | 85 |
MIMAT0002877 | hsa-miR-513a-5p | 8 | ......_ | 3 | 85 |
MIMAT0006786 | ssc-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0002035 | ptc-miR396e-5p | 8 | _...... | 3 | 85 |
MIMAT0002034 | ptc-miR396d | 8 | _...... | 3 | 85 |
MIMAT0002033 | ptc-miR396c | 8 | _...... | 3 | 85 |
MIMAT0002032 | ptc-miR396b | 8 | _...... | 3 | 85 |
MIMAT0002031 | ptc-miR396a | 8 | _...... | 3 | 85 |
MIMAT0003159 | dre-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0001703 | zma-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0001702 | zma-miR396b-5p | 8 | _...... | 3 | 85 |
MIMAT0001688 | gma-miR396b-5p | 8 | _...... | 3 | 85 |
MIMAT0001687 | gma-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0001657 | sof-miR396 | 8 | _...... | 3 | 85 |
MIMAT0001436 | sbi-miR396c | 8 | _...... | 3 | 85 |
MIMAT0001435 | sbi-miR396a | 8 | _...... | 3 | 85 |
MIMAT0001434 | sbi-miR396b | 8 | _...... | 3 | 85 |
MIMAT0000979 | osa-miR396c-5p | 8 | _...... | 3 | 85 |
MIMAT0000978 | osa-miR396b-5p | 8 | _...... | 3 | 85 |
MIMAT0000977 | osa-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0000945 | ath-miR396b-5p | 8 | _...... | 3 | 85 |
MIMAT0000944 | ath-miR396a-5p | 8 | _...... | 3 | 85 |
MIMAT0017125 | rno-miR-134-3p | 1 | _...... | 6 | 85 |
MIMAT0017082 | mmu-miR-383-3p | 6 | _...... | 1 | 85 |
MIMAT0000574 | rno-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0004597 | hsa-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0016989 | mmu-miR-146a-3p | 1 | ......_ | 6 | 85 |
MIMAT0000152 | mmu-miR-140-3p | 8 | _...... | 3 | 85 |
MIMAT0016985 | mmu-miR-134-3p | 1 | _...... | 6 | 85 |