Result for your query miRNA sequence
>ebv-miR-bart12
ccugugg

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cctgtgg7
MIMAT0037182ata-miR396b-5p8.......2100
MIMAT0037160ata-miR396d-5p8.......2100
MIMAT0037090ata-miR396a-5p8.......2100
MIMAT0036274chi-miR-543-5p2.......8100
MIMAT0035961chi-miR-140-3p8.......2100
MIMAT0033938atr-miR396a8.......2100
MIMAT0029885mmu-miR-7682-3p1.......7100
MIMAT0029417ipu-miR-1408.......2100
MIMAT0025707gga-miR-6612-5p8.......2100
MIMAT0025435pol-miR-140-3p8.......2100
MIMAT0024081ggo-miR-1408.......2100
MIMAT0023768cgr-miR-140-3p8.......2100
MIMAT0022778sha-miR-1408.......2100
MIMAT0022553ola-miR-140-3p8.......2100
MIMAT0020700bdi-miR396b-5p8.......2100
MIMAT0020686bdi-miR396a-5p8.......2100
MIMAT0019271oar-miR-543-5p2.......8100
MIMAT0018369far-miR3968.......2100
MIMAT0013835osa-miR396d8.......2100
MIMAT0013834osa-miR396h8.......2100
MIMAT0013833osa-miR396g8.......2100
MIMAT0006689cfa-miR-1408.......2100
MIMAT0026819mml-miR-134-3p1.......7100
MIMAT0003423ebv-miR-BART122.......8100
MIMAT0001601osa-miR396e-5p8.......2100
MIMAT0003722gga-miR-140-3p7.......1100
MIMAT0026481hsa-miR-134-3p1.......7100
MIMAT0037193ata-miR528-3p1......_685
MIMAT0037170ata-miR396c-5p8_......385
MIMAT0037168ata-miR396e-5p8_......385
MIMAT0036941oha-miR-54706......_185
MIMAT0036920oha-miR-383-3p6_......185
MIMAT0036720oha-miR-140-3p8_......385
MIMAT0035852bra-miR396-5p8_......385
MIMAT0035783tae-miR9669-5p3_......885
MIMAT0035481sly-miR396b8_......385
MIMAT0035455sly-miR396a-5p8_......385
MIMAT0034770efu-miR-91903......_885
MIMAT0034760eca-miR-65291......_685
MIMAT0034382cfa-miR-71801_......685
MIMAT0034335cfa-miR-88423_......885
MIMAT0034303cfa-miR-88136......_185
MIMAT0034278cfa-miR-65291......_685
MIMAT0033967esi-miR86296_......185
MIMAT0033942atr-miR396e8_......385
MIMAT0033940atr-miR396c8_......385
MIMAT0033939atr-miR396b8_......385
MIMAT0032360ssa-miR-140-3p8_......385
MIMAT0031858lus-miR396e8_......385
MIMAT0031822cpa-miR3968_......385
MIMAT0031523ppe-miR8122-5p8_......385
MIMAT0031495ppe-miR396b8_......385
MIMAT0031494ppe-miR396a8_......385
MIMAT0031404mmu-miR-497b8_......385
MIMAT0031335stu-miR396-5p8_......385
MIMAT0031154ama-miR396-5p8_......385
MIMAT0029878mmu-miR-3620-5p1_......685
MIMAT0029278mes-miR396f8_......385
MIMAT0029277mes-miR396e8_......385
MIMAT0029276mes-miR396d8_......385
MIMAT0029275mes-miR396c8_......385
MIMAT0029274mes-miR396b8_......385
MIMAT0029273mes-miR396a8_......385
MIMAT0029110gga-miR-7478-5p3......_885
MIMAT0029089gga-miR-7467-3p8_......385
MIMAT0029038gga-miR-7442-5p6......_185
MIMAT0028824mdo-miR-7384-5p3......_885
MIMAT0028678mdo-miR-7335-5p3_......885
MIMAT0028330mml-miR-7188-5p2_......785
MIMAT0028326mml-miR-7186-5p1_......685
MIMAT0028315mml-miR-6529-3p1......_685
MIMAT0026221ccr-miR-140-3p8_......385
MIMAT0026147cme-miR396d8_......385
MIMAT0026146cme-miR396c8_......385
MIMAT0026145cme-miR396b8_......385
MIMAT0026106cme-miR396a8_......385
MIMAT0025993mdm-miR396e8_......385
MIMAT0025992mdm-miR396d8_......385
MIMAT0025991mdm-miR396c8_......385
MIMAT0025990mdm-miR396b8_......385
MIMAT0025989mdm-miR396a8_......385
MIMAT0028125hsa-miR-7114-5p2_......785
MIMAT0028011mmu-miR-7053-3p3......_885
MIMAT0027894mmu-miR-6996-5p8......_385
MIMAT0027886mmu-miR-6992-5p3......_885
MIMAT0027523hsa-miR-6811-3p3......_885
MIMAT0027436hsa-miR-6768-5p8......_385
MIMAT0025588mmu-miR-65416......_185
MIMAT0025287hbr-miR396b8_......385
MIMAT0024825hvu-miR61996_......185
MIMAT0024710nta-miR396c8_......385
MIMAT0024709nta-miR396b8_......385
MIMAT0024708nta-miR396a8_......385
MIMAT0027237lus-miR396d8_......385
MIMAT0027213lus-miR396c8_......385
MIMAT0027212lus-miR396b8_......385
MIMAT0027207lus-miR396a8_......385
MIMAT0024531cca-miR396b8_......385
MIMAT0024529cca-miR396a-5p8_......385
MIMAT0023688ame-miR-6047b8......_385
MIMAT0023671ame-miR-6047a7_......285
MIMAT0023536dpr-miR3968_......385
MIMAT0032132gma-miR396k-5p8_......385
MIMAT0023063tur-miR-5732-3p8_......385
MIMAT0022517ssl-miR3968_......385
MIMAT0022340cin-miR-5606-3p3......_885
MIMAT0022107pti-miR54743......_885
MIMAT0022680amg-miR3968_......385
MIMAT0022674aau-miR3968_......385
MIMAT0022103aca-miR-54706......_185
MIMAT0021766aca-miR-140-3p8_......385
MIMAT0021669gma-miR396i-5p8_......385
MIMAT0021668gma-miR396h7_......285
MIMAT0020295ssp-miR3968_......385
MIMAT0020683bdi-miR396e-5p8_......385
MIMAT0020676bdi-miR396c-5p8_......385
MIMAT0020671bdi-miR396d-5p8_......385
MIMAT0027045bdi-miR528-3p1......_685
MIMAT0021040hsa-miR-5008-3p1......_685
MIMAT0020431tcc-miR396e8_......385
MIMAT0020429tcc-miR396c8_......385
MIMAT0020428tcc-miR396b8_......385
MIMAT0020427tcc-miR396a8_......385
MIMAT0019797hsa-miR-4700-3p6......_185
MIMAT0020966bcy-miR396b8_......385
MIMAT0020965bcy-miR396a8_......385
MIMAT0020962bgy-miR396b8_......385
MIMAT0020961bgy-miR396a8_......385
MIMAT0018956hsa-miR-44386......_185
MIMAT0018464csi-miR396b8_......385
MIMAT0018463csi-miR396a8_......385
MIMAT0018345gma-miR396e8_......385
MIMAT0018826tca-miR-3867-5p6_......185
MIMAT0018722tca-miR-3839-5p6......_185
MIMAT0018152pab-miR396a8_......385
MIMAT0017972ssc-miR-3836_......185
MIMAT0017971ssc-miR-146a-3p1......_685
MIMAT0016891hsa-miR-42651_......685
MIMAT0016873hsa-miR-43221_......685
MIMAT0016869hsa-miR-43183_......885
MIMAT0016618cin-miR-4065-5p3_......885
MIMAT0016414cin-miR-196-3p6_......185
MIMAT0017826rno-miR-3558-3p2_......785
MIMAT0015941ppy-miR-513c8......_385
MIMAT0015938ppy-miR-513a-5p8......_385
MIMAT0015764ppy-miR-140-3p8_......385
MIMAT0017617aly-miR834-5p7_......285
MIMAT0017559aly-miR396b-5p8_......385
MIMAT0017557aly-miR396a-5p8_......385
MIMAT0015523bmo-miR-33362_......785
MIMAT0015481bmo-miR-32947_......285
MIMAT0014915mmu-miR-3097-5p6......_185
MIMAT0014860mmu-miR-3076-5p6......_185
MIMAT0014823mmu-miR-3057-3p8_......385
MIMAT0014642tgu-miR-140-3p8_......385
MIMAT0026989tgu-miR-383-3p6_......185
MIMAT0014192rco-miR3968_......385
MIMAT0014078ccl-miR3968_......385
MIMAT0015363zma-miR528b-3p1......_685
MIMAT0015362zma-miR528a-3p1......_685
MIMAT0014017zma-miR396h8_......385
MIMAT0014016zma-miR396g-5p8_......385
MIMAT0014015zma-miR396f-5p8_......385
MIMAT0014014zma-miR396e-5p8_......385
MIMAT0012927eca-miR-140-3p8_......385
MIMAT0026937mdo-miR-140-3p8_......385
MIMAT0012577aqc-miR396b8_......385
MIMAT0012576aqc-miR396a8_......385
MIMAT0011358sbi-miR396e8_......385
MIMAT0011357sbi-miR396d8_......385
MIMAT0010088lja-miR3968_......385
MIMAT0010079gma-miR396c8_......385
MIMAT0010077zma-miR396d8_......385
MIMAT0010076zma-miR396c8_......385
MIMAT0009693aqu-miR-2017-3p3......_885
MIMAT0006560vvi-miR396c8_......385
MIMAT0026824mml-miR-146a-3p1......_685
MIMAT0006198mml-miR-140-3p8_......385
MIMAT0007642gga-miR-17396......_185
MIMAT0007600gga-miR-18133_......885
MIMAT0007531gga-miR-16523......_885
MIMAT0007337gga-miR-14593......_885
MIMAT0007336gga-miR-14583......_885
MIMAT0006813oan-miR-140-3p8_......385
MIMAT0005786pbi-miR-513c8......_385
MIMAT0005784pbi-miR-513a8......_385
MIMAT0005776ptr-miR-513a8......_385
MIMAT0005768mml-miR-513a8......_385
MIMAT0005760ssy-miR-513a8......_385
MIMAT0005726vvi-miR396d8_......385
MIMAT0005725vvi-miR396b8_......385
MIMAT0005724vvi-miR396a8_......385
MIMAT0005437cre-miR1159.18_......385
MIMAT0004999pta-miR3968_......385
MIMAT0004448bna-miR396a8_......385
MIMAT0005819ghr-miR396b8_......385
MIMAT0005818ghr-miR396a8_......385
MIMAT0011108mtr-miR396b-5p8_......385
MIMAT0011107mtr-miR396a-5p8_......385
MIMAT0003789bta-miR-1408_......385
MIMAT0026631gga-miR-383-3p6_......185
MIMAT0017197rno-miR-383-3p6_......185
MIMAT0022926osa-miR528-3p1......_685
MIMAT0002877hsa-miR-513a-5p8......_385
MIMAT0006786ssc-miR-140-3p8_......385
MIMAT0002035ptc-miR396e-5p8_......385
MIMAT0002034ptc-miR396d8_......385
MIMAT0002033ptc-miR396c8_......385
MIMAT0002032ptc-miR396b8_......385
MIMAT0002031ptc-miR396a8_......385
MIMAT0003159dre-miR-140-3p8_......385
MIMAT0001703zma-miR396a-5p8_......385
MIMAT0001702zma-miR396b-5p8_......385
MIMAT0001688gma-miR396b-5p8_......385
MIMAT0001687gma-miR396a-5p8_......385
MIMAT0001657sof-miR3968_......385
MIMAT0001436sbi-miR396c8_......385
MIMAT0001435sbi-miR396a8_......385
MIMAT0001434sbi-miR396b8_......385
MIMAT0000979osa-miR396c-5p8_......385
MIMAT0000978osa-miR396b-5p8_......385
MIMAT0000977osa-miR396a-5p8_......385
MIMAT0000945ath-miR396b-5p8_......385
MIMAT0000944ath-miR396a-5p8_......385
MIMAT0017125rno-miR-134-3p1_......685
MIMAT0017082mmu-miR-383-3p6_......185
MIMAT0000574rno-miR-140-3p8_......385
MIMAT0004597hsa-miR-140-3p8_......385
MIMAT0016989mmu-miR-146a-3p1......_685
MIMAT0000152mmu-miR-140-3p8_......385
MIMAT0016985mmu-miR-134-3p1_......685