| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | cgagggta | 8 | ||
| MIMAT0004475 | mdv2-miR-M28-3p | 1 | ........ | 8 | 100 |
| MIMAT0030423 | hsa-miR-7848-3p | 8 | _....... | 2 | 87 |
| MIMAT0019722 | hsa-miR-4655-3p | 7 | ......._ | 1 | 87 |
| MIMAT0009811 | nve-miR-2043a-3p | 7 | _....... | 1 | 87 |
| MIMAT0007425 | gga-miR-1565 | 1 | ......._ | 7 | 87 |
| MIMAT0036351 | gma-miR9732 | 1 | .a...... | 8 | 87 |
| MIMAT0025020 | hme-miR-6312-3p | 8 | .c...... | 1 | 87 |
| MIMAT0017996 | hsa-miR-3616-3p | 1 | ......c. | 8 | 87 |
| MIMAT0037002 | ssc-miR-9785-5p | 6 | _......_ | 1 | 75 |
| MIMAT0036664 | oha-miR-10c-5p | 6 | __...... | 1 | 75 |
| MIMAT0036662 | oha-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0036660 | oha-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0036504 | tch-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0036471 | tch-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0036390 | gma-miR9757 | 8 | _......_ | 3 | 75 |
| MIMAT0035913 | chi-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0035911 | chi-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0035604 | dvi-miR-993-5p | 7 | __...... | 2 | 75 |
| MIMAT0035508 | bdi-miR9499 | 6 | ......__ | 1 | 75 |
| MIMAT0033793 | pxy-miR-10-5p | 6 | __...... | 1 | 75 |
| MIMAT0033248 | ppc-miR-8218b-5p | 1 | ......__ | 6 | 75 |
| MIMAT0032999 | ppc-miR-57-5p | 6 | __...... | 1 | 75 |
| MIMAT0032990 | ppc-miR-8260-3p | 2 | ......__ | 7 | 75 |
| MIMAT0032866 | ppc-miR-8218a-5p | 1 | ......__ | 6 | 75 |
| MIMAT0032295 | ssa-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0032292 | ssa-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0031576 | bbe-miR-10c-5p | 6 | __...... | 1 | 75 |
| MIMAT0031572 | bbe-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0030348 | hhi-miR-10d | 6 | __...... | 1 | 75 |
| MIMAT0030171 | bdi-miR7722-3p | 3 | __...... | 8 | 75 |
| MIMAT0030030 | oar-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0029773 | cbn-miR-57 | 6 | __...... | 1 | 75 |
| MIMAT0029394 | ipu-miR-10d | 6 | __...... | 1 | 75 |
| MIMAT0029393 | ipu-miR-10c | 6 | __...... | 1 | 75 |
| MIMAT0029392 | ipu-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0029391 | ipu-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0028933 | mdo-miR-7398h-3p | 8 | _......_ | 3 | 75 |
| MIMAT0028376 | mml-miR-7205-5p | 2 | ......__ | 7 | 75 |
| MIMAT0026202 | ccr-miR-10d | 6 | __...... | 1 | 75 |
| MIMAT0026201 | ccr-miR-10c | 6 | __...... | 1 | 75 |
| MIMAT0026200 | ccr-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0027999 | mmu-miR-7047-3p | 8 | _......_ | 3 | 75 |
| MIMAT0027967 | mmu-miR-7031-3p | 7 | _......_ | 2 | 75 |
| MIMAT0027938 | mmu-miR-7017-5p | 2 | _......_ | 7 | 75 |
| MIMAT0027631 | hsa-miR-6865-3p | 8 | _......_ | 3 | 75 |
| MIMAT0027584 | hsa-miR-6841-5p | 2 | __...... | 7 | 75 |
| MIMAT0027508 | hsa-miR-6804-5p | 2 | _......_ | 7 | 75 |
| MIMAT0027507 | hsa-miR-6803-3p | 7 | ......__ | 2 | 75 |
| MIMAT0027491 | hsa-miR-6795-3p | 8 | ......__ | 3 | 75 |
| MIMAT0027410 | hsa-miR-6755-5p | 2 | __...... | 7 | 75 |
| MIMAT0027377 | hsa-miR-6738-5p | 1 | ......__ | 6 | 75 |
| MIMAT0025422 | pol-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0025405 | tgu-miR-1759 | 2 | __...... | 7 | 75 |
| MIMAT0024490 | mse-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0024467 | mse-miR-993 | 6 | __...... | 1 | 75 |
| MIMAT0023880 | cgr-miR-296 | 1 | _......_ | 6 | 75 |
| MIMAT0023737 | cgr-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0023735 | cgr-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0023316 | hco-miR-5884 | 2 | __...... | 7 | 75 |
| MIMAT0023153 | mtr-miR5037c | 7 | _......_ | 2 | 75 |
| MIMAT0023151 | mtr-miR5037b | 7 | _......_ | 2 | 75 |
| MIMAT0023150 | mtr-miR5037a | 7 | _......_ | 2 | 75 |
| MIMAT0022817 | sha-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0022799 | sha-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0022651 | ola-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0022633 | ola-miR-10d | 6 | __...... | 1 | 75 |
| MIMAT0023058 | tur-miR-993a-5p | 6 | __...... | 1 | 75 |
| MIMAT0023052 | tur-miR-993b-5p | 6 | __...... | 1 | 75 |
| MIMAT0022388 | ath-miR5629 | 3 | __...... | 8 | 75 |
| MIMAT0022385 | mmu-miR-5627-5p | 2 | _......_ | 7 | 75 |
| MIMAT0022363 | mmu-miR-5618-5p | 6 | __...... | 1 | 75 |
| MIMAT0021721 | aca-miR-10c-5p | 6 | __...... | 1 | 75 |
| MIMAT0021719 | aca-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0021717 | aca-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0021605 | gma-miR5037b | 7 | _......_ | 2 | 75 |
| MIMAT0021464 | asu-miR-57-5p | 6 | __...... | 1 | 75 |
| MIMAT0021055 | gma-miR5034 | 8 | __...... | 3 | 75 |
| MIMAT0019645 | pma-miR-4611 | 3 | _......_ | 8 | 75 |
| MIMAT0019573 | pma-miR-4544-5p | 6 | __...... | 1 | 75 |
| MIMAT0019378 | pma-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0019376 | pma-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0018477 | csi-miR477c | 7 | ......__ | 2 | 75 |
| MIMAT0018170 | mghv-miR-M1-12-5p | 2 | __...... | 7 | 75 |
| MIMAT0018618 | tgu-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0018564 | ame-miR-3785 | 6 | __...... | 1 | 75 |
| MIMAT0018125 | pab-miR3693 | 2 | _......_ | 7 | 75 |
| MIMAT0017977 | ssc-miR-4337 | 1 | __...... | 6 | 75 |
| MIMAT0016626 | cin-miR-4069-5p | 7 | __...... | 2 | 75 |
| MIMAT0016330 | ahy-miR3508 | 3 | _......_ | 8 | 75 |
| MIMAT0016001 | ppy-miR-555 | 1 | __...... | 6 | 75 |
| MIMAT0015810 | ppy-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0015730 | ppy-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0014375 | cqu-miR-993-5p | 6 | __...... | 1 | 75 |
| MIMAT0014266 | aae-miR-993 | 6 | __...... | 1 | 75 |
| MIMAT0014105 | bma-miR-57 | 6 | __...... | 1 | 75 |
| MIMAT0013885 | ssc-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0013884 | ssc-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0013107 | eca-miR-296 | 1 | _......_ | 6 | 75 |
| MIMAT0013090 | eca-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0013019 | eca-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0013624 | bmo-miR-2756-3p | 7 | ......__ | 2 | 75 |
| MIMAT0012682 | isc-miR-10 | 6 | __...... | 1 | 75 |
| MIMAT0012636 | dpu-miR-10 | 6 | __...... | 1 | 75 |
| MIMAT0013551 | cte-miR-1991 | 7 | __...... | 2 | 75 |
| MIMAT0012461 | dsi-miR-993-5p | 7 | __...... | 2 | 75 |
| MIMAT0012263 | dps-miR-993-5p | 7 | __...... | 2 | 75 |
| MIMAT0011911 | bta-miR-2368-5p | 2 | _......_ | 7 | 75 |
| MIMAT0011729 | ppc-miR-2272 | 2 | __...... | 7 | 75 |
| MIMAT0011704 | ppc-miR-2267 | 2 | __...... | 7 | 75 |
| MIMAT0011509 | crm-miR-57 | 6 | __...... | 1 | 75 |
| MIMAT0010144 | lmi-miR-10-5p | 6 | __...... | 1 | 75 |
| MIMAT0015298 | bmo-miR-993a-5p | 8 | __...... | 3 | 75 |
| MIMAT0015297 | bmo-miR-993b-5p | 6 | __...... | 1 | 75 |
| MIMAT0019182 | tca-miR-993-5p | 6 | __...... | 1 | 75 |
| MIMAT0009733 | lgi-miR-1991 | 8 | __...... | 3 | 75 |
| MIMAT0009719 | hru-miR-1991 | 8 | __...... | 3 | 75 |
| MIMAT0009611 | sko-miR-10 | 6 | __...... | 1 | 75 |
| MIMAT0009563 | lgi-miR-10 | 6 | __...... | 1 | 75 |
| MIMAT0009510 | cte-miR-10b | 7 | __...... | 2 | 75 |
| MIMAT0009509 | cte-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0009469 | bfl-miR-10c | 6 | __...... | 1 | 75 |
| MIMAT0009466 | bfl-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0009273 | bta-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0008914 | dvi-miR-306-3p | 1 | _......_ | 6 | 75 |
| MIMAT0008649 | dmo-miR-306-3p | 1 | _......_ | 6 | 75 |
| MIMAT0008357 | tca-miR-10-5p | 6 | __...... | 1 | 75 |
| MIMAT0008236 | ptr-miR-555 | 1 | __...... | 6 | 75 |
| MIMAT0008079 | ptr-miR-296 | 1 | _......_ | 6 | 75 |
| MIMAT0007950 | ptr-miR-1182 | 1 | _......_ | 6 | 75 |
| MIMAT0007945 | ptr-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0007944 | ptr-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0006737 | cfa-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0006467 | mml-miR-616 | 8 | _......_ | 3 | 75 |
| MIMAT0006252 | mml-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0006162 | mml-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0006161 | mml-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0007731 | gga-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0007666 | gga-miR-1759-5p | 2 | __...... | 7 | 75 |
| MIMAT0005989 | osa-miR1438 | 1 | __...... | 6 | 75 |
| MIMAT0007218 | oan-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0007122 | oan-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0007120 | oan-miR-1381-5p | 7 | ......__ | 2 | 75 |
| MIMAT0005827 | hsa-miR-1182 | 1 | _......_ | 6 | 75 |
| MIMAT0012541 | mdv2-miR-M19-5p | 7 | ......__ | 2 | 75 |
| MIMAT0020893 | dme-miR-993-5p | 6 | __...... | 1 | 75 |
| MIMAT0004090 | mdo-miR-10b-5p | 7 | __...... | 2 | 75 |
| MIMAT0004089 | mdo-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0003839 | bta-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0003786 | bta-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0003773 | fru-miR-10d | 6 | __...... | 1 | 75 |
| MIMAT0003772 | tni-miR-10d | 6 | __...... | 1 | 75 |
| MIMAT0003558 | xtr-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0003557 | xtr-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0003425 | ebv-miR-BART14-5p | 6 | __...... | 1 | 75 |
| MIMAT0003219 | hsa-miR-555 | 1 | __...... | 6 | 75 |
| MIMAT0003088 | tni-miR-10c | 6 | __...... | 1 | 75 |
| MIMAT0003087 | fru-miR-10c | 6 | __...... | 1 | 75 |
| MIMAT0002964 | tni-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0002963 | fru-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0002493 | ppa-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0002492 | mne-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0002491 | ggo-miR-10b | 6 | __...... | 1 | 75 |
| MIMAT0002490 | ppa-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0002489 | age-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0002488 | sla-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0002487 | ppy-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0002486 | ggo-miR-10a | 6 | __...... | 1 | 75 |
| MIMAT0032003 | dre-miR-430i-5p | 6 | _......_ | 1 | 75 |
| MIMAT0032002 | dre-miR-430a-17-5p | 6 | _......_ | 1 | 75 |
| MIMAT0032001 | dre-miR-430a-16-5p | 6 | _......_ | 1 | 75 |
| MIMAT0032000 | dre-miR-430a-15-5p | 6 | _......_ | 1 | 75 |
| MIMAT0031999 | dre-miR-430a-14-5p | 6 | _......_ | 1 | 75 |
| MIMAT0031998 | dre-miR-430a-13-5p | 6 | _......_ | 1 | 75 |
| MIMAT0031997 | dre-miR-430a-12-5p | 6 | _......_ | 1 | 75 |
| MIMAT0031996 | dre-miR-430a-11-5p | 6 | _......_ | 1 | 75 |
| MIMAT0031995 | dre-miR-430a-4-5p | 6 | _......_ | 1 | 75 |
| MIMAT0031994 | dre-miR-430a-5p | 6 | _......_ | 1 | 75 |
| MIMAT0001771 | dre-miR-10d-5p | 6 | __...... | 1 | 75 |
| MIMAT0001770 | dre-miR-10c-5p | 6 | __...... | 1 | 75 |
| MIMAT0001268 | dre-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0001267 | dre-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0001148 | gga-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0004742 | rno-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0000782 | rno-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0004679 | hsa-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0000648 | mmu-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0000477 | cbr-miR-57 | 6 | __...... | 1 | 75 |
| MIMAT0004576 | mmu-miR-296-3p | 1 | _......_ | 6 | 75 |
| MIMAT0000254 | hsa-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0000253 | hsa-miR-10a-5p | 6 | __...... | 1 | 75 |
| MIMAT0000208 | mmu-miR-10b-5p | 6 | __...... | 1 | 75 |
| MIMAT0000029 | cel-miR-57-5p | 6 | __...... | 1 | 75 |
