Result for your query miRNA sequence
>rrv-miR-rr1-6-3p
cgauguac

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgatgtac8
MIMAT0004414rrv-miR-rR1-6-3p1........8100
MIMAT0017757esi-miR3450-5p7......._187
MIMAT0009706cte-miR-19957_.......187
MIMAT0029621crm-miR-76041......t.887
MIMAT0022576ola-miR-331.a......887
MIMAT0018599ame-miR-37318......t.187
MIMAT0036801oha-miR-1c-5p6__......175
MIMAT0036253chi-miR-493-5p8__......375
MIMAT0035340gsa-miR-9397-5p2_......_775
MIMAT0035325gsa-miR-184c-3p1_......_675
MIMAT0035094efu-miR-11852__......775
MIMAT0034929efu-miR-4938__......375
MIMAT0034520eca-miR-89833......__875
MIMAT0034076gra-miR86953_......_875
MIMAT0033863atr-miR85793_......_875
MIMAT0031737bbe-miR-4869-5p2......__775
MIMAT0031735bbe-miR-4857-5p2......__775
MIMAT0030955stu-miR8041b-3p3_......_875
MIMAT0030954stu-miR8041a-3p3_......_875
MIMAT0030846stu-miR79798__......375
MIMAT0030324bdi-miR7784b-5p6__......175
MIMAT0030322bdi-miR7784a-5p6__......175
MIMAT0029317lja-miR171d-3p1......__675
MIMAT0028967oan-miR-7410-3p3......__875
MIMAT0026445sbi-miR6232a-3p3_......_875
MIMAT0026380bma-miR-5880a6......__175
MIMAT0027471hsa-miR-6785-3p6......__175
MIMAT0025377ssc-miR-493-5p8__......375
MIMAT0025102mmu-miR-63591......__675
MIMAT0024982hme-miR-33381__......675
MIMAT0027336ppe-miR6297b1_......_675
MIMAT0024432mse-miR-33381__......675
MIMAT0024249ggo-miR-4938__......375
MIMAT0023154mtr-miR2593d7_......_275
MIMAT0023148mtr-miR2593e7_......_275
MIMAT0023015bra-miR1885b6_......_175
MIMAT0022352cin-miR-5612-3p8_......_375
MIMAT0021678gma-miR171l1......__675
MIMAT0021655gma-miR171k-5p1......__675
MIMAT0020184dme-miR-4962-3p3......__875
MIMAT0020108bfl-miR-4869-5p2......__775
MIMAT0020083bfl-miR-48572......__775
MIMAT0019237oar-miR-493-5p8__......375
MIMAT0018888tca-miR-3893-5p2......__775
MIMAT0018759tca-miR-3851a-3p8__......375
MIMAT0018685tca-miR-3811a-3p2__......775
MIMAT0018677tca-miR-3811b-3p2__......775
MIMAT0018665tca-miR-3811e-3p2__......775
MIMAT0018651tca-miR-3811d-3p2__......775
MIMAT0018645tca-miR-3811c-3p2__......775
MIMAT0018639tca-miR-3808-3p2__......775
MIMAT0018562ame-miR-3716b1......__675
MIMAT0016756cin-miR-4152-5p2_......_775
MIMAT0016552cin-miR-4031-3p3__......875
MIMAT0015608bmo-miR-3347b6_......_175
MIMAT0015533bmo-miR-3347a6_......_175
MIMAT0015526bmo-miR-3338-3p1__......675
MIMAT0015046hsa-miR-31712_......_775
MIMAT0012039bta-miR-1434-5p6__......175
MIMAT0009807nve-miR-2042-3p7__......275
MIMAT0026884mml-miR-493-5p8__......375
MIMAT0007705gga-miR-1791-3p2......__775
MIMAT0007284gga-miR-1397-3p1_......_675
MIMAT0026731mtr-miR171e-5p1......__675
MIMAT0017276mmu-miR-493-5p8__......375
MIMAT0020347cel-miR-784-3p2__......775
MIMAT0012099sme-miR-8a-5p7......__275
MIMAT0003934ath-miR7753......__875
MIMAT0017217rno-miR-493-5p8__......375
MIMAT0002813hsa-miR-493-5p8__......375
MIMAT0015161zma-miR171f-5p1......__675