Result for your query miRNA sequence
>rcmv-miR-r111.1-3
cgggggc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgggggc7
MIMAT0012598hsv1-miR-H8-3p7.......1100
MIMAT0022946hsa-miR-1237-5p1.......7100
MIMAT0037155ata-miR9772b-3p2_......785
MIMAT0037107ata-miR9772a-3p2_......785
MIMAT0035711bhv5-miR-B141......_685
MIMAT0034985efu-miR-46672_......785
MIMAT0034798efu-miR-92088......_385
MIMAT0034786efu-miR-9200b3......_885
MIMAT0034525eca-miR-89888_......385
MIMAT0034481eca-miR-89527_......285
MIMAT0034035gra-miR7486d2_......785
MIMAT0032317ssa-miR-128-4-5p1_......685
MIMAT0031374stu-miR384-3p2_......785
MIMAT0030710prd-miR-7931-5p1_......685
MIMAT0030648prd-miR-7911b-5p6_......185
MIMAT0030648prd-miR-7911b-5p8......_385
MIMAT0030646prd-miR-7911a-5p6_......185
MIMAT0030646prd-miR-7911a-5p8......_385
MIMAT0028606mdo-miR-7306-5p3_......885
MIMAT0028149ssc-miR-7137-5p1......_685
MIMAT0028071mmu-miR-7082-3p6_......185
MIMAT0028044mmu-miR-7069-5p3_......885
MIMAT0027838mmu-miR-6968-5p2_......785
MIMAT0027694mmu-miR-6897-5p2_......785
MIMAT0027670hsa-miR-6885-5p3_......885
MIMAT0027596hsa-miR-6848-5p2_......785
MIMAT0027592hsa-miR-6846-5p2_......785
MIMAT0027510hsa-miR-6805-5p3_......885
MIMAT0025311prv-miR-LLT83_......885
MIMAT0025071rno-miR-30727_......285
MIMAT0024864mmu-miR-62441_......685
MIMAT0024363ppy-miR-39438_......385
MIMAT0024210ggo-miR-39438_......385
MIMAT0024152ggo-miR-44883_......885
MIMAT0024046ptr-miR-39438_......385
MIMAT0023893cgr-miR-3072-3p7_......285
MIMAT0021732aca-miR-128-5p1_......685
MIMAT0019791hsa-miR-4697-5p2_......785
MIMAT0019022hsa-miR-44882_......785
MIMAT0018359hsa-miR-39438_......385
MIMAT0016865hsa-miR-43137_......285
MIMAT0015650hsv2-miR-H53_......885
MIMAT0014939mmu-miR-3104-5p3_......885
MIMAT0014853mmu-miR-3072-3p7_......285
MIMAT0026977tgu-miR-128-2-5p1_......685
MIMAT0012046bta-miR-1777b1_......685
MIMAT0012035bta-miR-2454-5p3_......885
MIMAT0012032bta-miR-1777a2_......785
MIMAT0012005bta-miR-24332_......785
MIMAT0011857bta-miR-2328-5p6_......185
MIMAT0011856bta-miR-23272_......785
MIMAT0011817bta-miR-23051......_685
MIMAT0007867mmu-miR-18956......_185
MIMAT0026814mml-miR-128b-5p1_......685
MIMAT0007472gga-miR-16062_......785
MIMAT0007078oan-miR-1421p-5p2_......785
MIMAT0005545mcmv-miR-M23-2-3p3_......885
MIMAT0026662mdo-miR-128a-5p1_......685
MIMAT0026506gga-miR-128-2-5p1_......685
MIMAT0017119rno-miR-128-2-5p1_......685
MIMAT0026486hsa-miR-328-5p3_......885
MIMAT0031095hsa-miR-128-2-5p1_......685
MIMAT0017069mmu-miR-128-2-5p1_......685
MIMAT0017030mmu-miR-328-5p2_......785
MIMAT0017029rno-miR-328a-5p2_......785
MIMAT0017028rno-miR-326-5p1_......685
MIMAT0017027mmu-miR-326-5p1_......685