Result for your query miRNA sequence
>hvt-miR-h3-5p
cgucaugg

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgtcatgg8
MIMAT0012712hvt-miR-H3-5p1........8100
MIMAT0035269gsa-miR-281-3p2_.......887
MIMAT0034759eca-miR-91791_.......787
MIMAT0033804pxy-miR-2812_.......887
MIMAT0033593sma-miR-281-3p2_.......887
MIMAT0033405str-miR-47-3p2_.......887
MIMAT0032859ppc-miR-8214-3p2_.......887
MIMAT0031661bbe-miR-281-3p2_.......887
MIMAT0030509prd-miR-46-3p2_.......887
MIMAT0029744cbn-miR-472_.......887
MIMAT0029743cbn-miR-462_.......887
MIMAT0023327hco-miR-462_.......887
MIMAT0023047tur-miR-281-3p2_.......887
MIMAT0021458asu-miR-46-3p2_.......887
MIMAT0020527ath-miR50221_.......787
MIMAT0019902hsa-miR-4757-3p7......._187
MIMAT0019535pma-miR-281a2_.......887
MIMAT0018415nlo-miR-2812_.......887
MIMAT0018388ngi-miR-2811_.......787
MIMAT0015658nvi-miR-2812_.......887
MIMAT0014359cqu-miR-281-3p2_.......887
MIMAT0014232aae-miR-281-3p2_.......887
MIMAT0014134api-miR-2812_.......887
MIMAT0014123bma-miR-2812_.......887
MIMAT0012655dpu-miR-2812_.......887
MIMAT0011655ppc-miR-462_.......887
MIMAT0011598crm-miR-46-3p2_.......887
MIMAT0011542crm-miR-472_.......887
MIMAT0010141lmi-miR-281-3p2_.......887
MIMAT0009641sko-miR-2812_.......887
MIMAT0009595lgi-miR-281-3p2_.......887
MIMAT0009540cte-miR-2812_.......887
MIMAT0009500bfl-miR-2812_.......887
MIMAT0009396mmu-miR-1933-5p2_.......887
MIMAT0009061dya-miR-281-3p2_.......887
MIMAT0008995dwi-miR-281-3p2_.......887
MIMAT0008927dvi-miR-281-3p2_.......887
MIMAT0008906dsi-miR-281-3p2_.......887
MIMAT0008783dse-miR-281-3p2_.......887
MIMAT0008728dpe-miR-281-3p2_.......887
MIMAT0008642dmo-miR-281-3p2_.......887
MIMAT0008588dgr-miR-281-3p2_.......887
MIMAT0008502der-miR-281-3p2_.......887
MIMAT0008429dan-miR-281-3p2_.......887
MIMAT0008385tca-miR-281-3p2_.......887
MIMAT0006138csa-miR-2812_.......887
MIMAT0006114cin-miR-281-3p2_.......887
MIMAT0015249cin-let-7b-3p8_.......287
MIMAT0006085odi-miR-2812_.......887
MIMAT0005268smo-miR11118_.......287
MIMAT0004013sme-miR-281-3p2_.......887
MIMAT0001513aga-miR-2812_.......887
MIMAT0001483ame-miR-2812_.......887
MIMAT0001245dps-miR-2812_.......887
MIMAT0000472cbr-miR-472_.......887
MIMAT0000471cbr-miR-462_.......887
MIMAT0000345dme-miR-281-3p2_.......887
MIMAT0000018cel-miR-47-3p2_.......887
MIMAT0000017cel-miR-46-3p2_.......887
MIMAT0030987hsa-miR-80608.t......187
MIMAT0037233ata-miR167d-3p3_......_875
MIMAT0037175ata-miR167b-3p3_......_875
MIMAT0037109ata-miR167e-3p2_......_775
MIMAT0035492bdi-miR94858......__375
MIMAT0034465eca-miR-89366_......_175
MIMAT0034249gra-miR7492f6__......175
MIMAT0034168gra-miR7494d1__......675
MIMAT0034115gra-miR7492e6__......175
MIMAT0033968esi-miR8623d3__......875
MIMAT0033960esi-miR8623a3__......875
MIMAT0033340str-miR-236-5p1......__675
MIMAT0033199ppc-miR-8327-3p7......__275
MIMAT0033076ppc-miR-8285-3p2_......_775
MIMAT0033021ppc-miR-8267-3p7_......_275
MIMAT0032967ppc-miR-2238j-3p7......__275
MIMAT0032735ssa-miR-8156-3p3_......_875
MIMAT0031304stu-miR167c-3p2_......_775
MIMAT0030599prd-miR-7900-3p2__......775
MIMAT0030289bdi-miR7769-3p2_......_775
MIMAT0030092bdi-miR167e-3p3_......_875
MIMAT0029707cbn-miR-64g6_......_175
MIMAT0029697cbn-miR-64m6_......_175
MIMAT0029639crm-miR-76136_......_175
MIMAT0029603cbr-miR-64c6_......_175
MIMAT0029336lja-miR75211__......675
MIMAT0028869mdo-miR-7388a-3p3_......_875
MIMAT0028696mdo-miR-7343-5p1__......675
MIMAT0027721mmu-miR-6910-3p1__......675
MIMAT0027495hsa-miR-6797-3p8_......_375
MIMAT0025659gga-miR-6576-5p1__......675
MIMAT0025004hme-miR-6301-1-5p1......__675
MIMAT0024446mse-miR-2813_......_875
MIMAT0024089ggo-miR-5983......__875
MIMAT0023986cgr-miR-5983......__875
MIMAT0023701hsa-miR-60768_......_375
MIMAT0023592sly-miR60238__......375
MIMAT0023591stu-miR60238__......375
MIMAT0022466gma-miR56788__......375
MIMAT0022212mtr-miR5556-3p8......__375
MIMAT0022209mtr-miR5274b-5p8......__375
MIMAT0022000aca-miR-5394-5p7__......275
MIMAT0021413osa-miR53408......__375
MIMAT0021177mtr-miR52191__......675
MIMAT0018281gma-miR43773......__875
MIMAT0018524ame-miR-37541__......675
MIMAT0016810cin-miR-4192-3p1__......675
MIMAT0016040ppy-miR-5983......__875
MIMAT0017628aly-miR842-3p1__......675
MIMAT0017478aly-miR167c-3p3_......_875
MIMAT0017476aly-miR167b-3p2_......_775
MIMAT0015638bmo-miR-3204b3......__875
MIMAT0015511bmo-miR-33247__......275
MIMAT0015468bmo-miR-32823_......_875
MIMAT0015381bmo-miR-3204a-5p3......__875
MIMAT0012922eca-miR-5983......__875
MIMAT0013516hsa-miR-2681-3p3__......875
MIMAT0013416mtr-miR2646b6_......_175
MIMAT0013415mtr-miR2646a6_......_175
MIMAT0026922bdi-miR166a-5p8......__375
MIMAT0011677ppc-miR-63e7......__275
MIMAT0011637crm-miR-64b-5p6_......_175
MIMAT0011635crm-miR-66-5p6_......_175
MIMAT0011484cbr-miR-65-5p6_......_175
MIMAT0011280sme-miR-21788......__375
MIMAT0008267ptr-miR-5983......__875
MIMAT0006455mml-miR-598-3p3......__875
MIMAT0005325rno-miR-598-3p3......__875
MIMAT0005286rno-miR-8787_......_275
MIMAT0005254smo-miR10988......__375
MIMAT0004942mmu-miR-598-3p3......__875
MIMAT0004933mmu-miR-878-3p7_......_275
MIMAT0004264ath-miR8421__......675
MIMAT0004829ppt-miR1211-3p8_......_375
MIMAT0003497mmu-miR-7073_......_875
MIMAT0003266hsa-miR-598-3p3......__875
MIMAT0015188zma-miR167g-3p2_......_775
MIMAT0015144zma-miR167d-3p2_......_775
MIMAT0001292cbr-miR-64a6_......_175
MIMAT0022887osa-miR166j-5p8......__375
MIMAT0022874osa-miR167h-3p3_......_875
MIMAT0022860osa-miR167c-3p2_......_775
MIMAT0000038cel-miR-66-5p6_......_175