RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | cgtcatgg | 8 | ||
MIMAT0012712 | hvt-miR-H3-5p | 1 | ........ | 8 | 100 |
MIMAT0035269 | gsa-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0034759 | eca-miR-9179 | 1 | _....... | 7 | 87 |
MIMAT0033804 | pxy-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0033593 | sma-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0033405 | str-miR-47-3p | 2 | _....... | 8 | 87 |
MIMAT0032859 | ppc-miR-8214-3p | 2 | _....... | 8 | 87 |
MIMAT0031661 | bbe-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0030509 | prd-miR-46-3p | 2 | _....... | 8 | 87 |
MIMAT0029744 | cbn-miR-47 | 2 | _....... | 8 | 87 |
MIMAT0029743 | cbn-miR-46 | 2 | _....... | 8 | 87 |
MIMAT0023327 | hco-miR-46 | 2 | _....... | 8 | 87 |
MIMAT0023047 | tur-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0021458 | asu-miR-46-3p | 2 | _....... | 8 | 87 |
MIMAT0020527 | ath-miR5022 | 1 | _....... | 7 | 87 |
MIMAT0019902 | hsa-miR-4757-3p | 7 | ......._ | 1 | 87 |
MIMAT0019535 | pma-miR-281a | 2 | _....... | 8 | 87 |
MIMAT0018415 | nlo-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0018388 | ngi-miR-281 | 1 | _....... | 7 | 87 |
MIMAT0015658 | nvi-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0014359 | cqu-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0014232 | aae-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0014134 | api-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0014123 | bma-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0012655 | dpu-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0011655 | ppc-miR-46 | 2 | _....... | 8 | 87 |
MIMAT0011598 | crm-miR-46-3p | 2 | _....... | 8 | 87 |
MIMAT0011542 | crm-miR-47 | 2 | _....... | 8 | 87 |
MIMAT0010141 | lmi-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0009641 | sko-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0009595 | lgi-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0009540 | cte-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0009500 | bfl-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0009396 | mmu-miR-1933-5p | 2 | _....... | 8 | 87 |
MIMAT0009061 | dya-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008995 | dwi-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008927 | dvi-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008906 | dsi-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008783 | dse-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008728 | dpe-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008642 | dmo-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008588 | dgr-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008502 | der-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008429 | dan-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0008385 | tca-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0006138 | csa-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0006114 | cin-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0015249 | cin-let-7b-3p | 8 | _....... | 2 | 87 |
MIMAT0006085 | odi-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0005268 | smo-miR1111 | 8 | _....... | 2 | 87 |
MIMAT0004013 | sme-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0001513 | aga-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0001483 | ame-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0001245 | dps-miR-281 | 2 | _....... | 8 | 87 |
MIMAT0000472 | cbr-miR-47 | 2 | _....... | 8 | 87 |
MIMAT0000471 | cbr-miR-46 | 2 | _....... | 8 | 87 |
MIMAT0000345 | dme-miR-281-3p | 2 | _....... | 8 | 87 |
MIMAT0000018 | cel-miR-47-3p | 2 | _....... | 8 | 87 |
MIMAT0000017 | cel-miR-46-3p | 2 | _....... | 8 | 87 |
MIMAT0030987 | hsa-miR-8060 | 8 | .t...... | 1 | 87 |
MIMAT0037233 | ata-miR167d-3p | 3 | _......_ | 8 | 75 |
MIMAT0037175 | ata-miR167b-3p | 3 | _......_ | 8 | 75 |
MIMAT0037109 | ata-miR167e-3p | 2 | _......_ | 7 | 75 |
MIMAT0035492 | bdi-miR9485 | 8 | ......__ | 3 | 75 |
MIMAT0034465 | eca-miR-8936 | 6 | _......_ | 1 | 75 |
MIMAT0034249 | gra-miR7492f | 6 | __...... | 1 | 75 |
MIMAT0034168 | gra-miR7494d | 1 | __...... | 6 | 75 |
MIMAT0034115 | gra-miR7492e | 6 | __...... | 1 | 75 |
MIMAT0033968 | esi-miR8623d | 3 | __...... | 8 | 75 |
MIMAT0033960 | esi-miR8623a | 3 | __...... | 8 | 75 |
MIMAT0033340 | str-miR-236-5p | 1 | ......__ | 6 | 75 |
MIMAT0033199 | ppc-miR-8327-3p | 7 | ......__ | 2 | 75 |
MIMAT0033076 | ppc-miR-8285-3p | 2 | _......_ | 7 | 75 |
MIMAT0033021 | ppc-miR-8267-3p | 7 | _......_ | 2 | 75 |
MIMAT0032967 | ppc-miR-2238j-3p | 7 | ......__ | 2 | 75 |
MIMAT0032735 | ssa-miR-8156-3p | 3 | _......_ | 8 | 75 |
MIMAT0031304 | stu-miR167c-3p | 2 | _......_ | 7 | 75 |
MIMAT0030599 | prd-miR-7900-3p | 2 | __...... | 7 | 75 |
MIMAT0030289 | bdi-miR7769-3p | 2 | _......_ | 7 | 75 |
MIMAT0030092 | bdi-miR167e-3p | 3 | _......_ | 8 | 75 |
MIMAT0029707 | cbn-miR-64g | 6 | _......_ | 1 | 75 |
MIMAT0029697 | cbn-miR-64m | 6 | _......_ | 1 | 75 |
MIMAT0029639 | crm-miR-7613 | 6 | _......_ | 1 | 75 |
MIMAT0029603 | cbr-miR-64c | 6 | _......_ | 1 | 75 |
MIMAT0029336 | lja-miR7521 | 1 | __...... | 6 | 75 |
MIMAT0028869 | mdo-miR-7388a-3p | 3 | _......_ | 8 | 75 |
MIMAT0028696 | mdo-miR-7343-5p | 1 | __...... | 6 | 75 |
MIMAT0027721 | mmu-miR-6910-3p | 1 | __...... | 6 | 75 |
MIMAT0027495 | hsa-miR-6797-3p | 8 | _......_ | 3 | 75 |
MIMAT0025659 | gga-miR-6576-5p | 1 | __...... | 6 | 75 |
MIMAT0025004 | hme-miR-6301-1-5p | 1 | ......__ | 6 | 75 |
MIMAT0024446 | mse-miR-281 | 3 | _......_ | 8 | 75 |
MIMAT0024089 | ggo-miR-598 | 3 | ......__ | 8 | 75 |
MIMAT0023986 | cgr-miR-598 | 3 | ......__ | 8 | 75 |
MIMAT0023701 | hsa-miR-6076 | 8 | _......_ | 3 | 75 |
MIMAT0023592 | sly-miR6023 | 8 | __...... | 3 | 75 |
MIMAT0023591 | stu-miR6023 | 8 | __...... | 3 | 75 |
MIMAT0022466 | gma-miR5678 | 8 | __...... | 3 | 75 |
MIMAT0022212 | mtr-miR5556-3p | 8 | ......__ | 3 | 75 |
MIMAT0022209 | mtr-miR5274b-5p | 8 | ......__ | 3 | 75 |
MIMAT0022000 | aca-miR-5394-5p | 7 | __...... | 2 | 75 |
MIMAT0021413 | osa-miR5340 | 8 | ......__ | 3 | 75 |
MIMAT0021177 | mtr-miR5219 | 1 | __...... | 6 | 75 |
MIMAT0018281 | gma-miR4377 | 3 | ......__ | 8 | 75 |
MIMAT0018524 | ame-miR-3754 | 1 | __...... | 6 | 75 |
MIMAT0016810 | cin-miR-4192-3p | 1 | __...... | 6 | 75 |
MIMAT0016040 | ppy-miR-598 | 3 | ......__ | 8 | 75 |
MIMAT0017628 | aly-miR842-3p | 1 | __...... | 6 | 75 |
MIMAT0017478 | aly-miR167c-3p | 3 | _......_ | 8 | 75 |
MIMAT0017476 | aly-miR167b-3p | 2 | _......_ | 7 | 75 |
MIMAT0015638 | bmo-miR-3204b | 3 | ......__ | 8 | 75 |
MIMAT0015511 | bmo-miR-3324 | 7 | __...... | 2 | 75 |
MIMAT0015468 | bmo-miR-3282 | 3 | _......_ | 8 | 75 |
MIMAT0015381 | bmo-miR-3204a-5p | 3 | ......__ | 8 | 75 |
MIMAT0012922 | eca-miR-598 | 3 | ......__ | 8 | 75 |
MIMAT0013516 | hsa-miR-2681-3p | 3 | __...... | 8 | 75 |
MIMAT0013416 | mtr-miR2646b | 6 | _......_ | 1 | 75 |
MIMAT0013415 | mtr-miR2646a | 6 | _......_ | 1 | 75 |
MIMAT0026922 | bdi-miR166a-5p | 8 | ......__ | 3 | 75 |
MIMAT0011677 | ppc-miR-63e | 7 | ......__ | 2 | 75 |
MIMAT0011637 | crm-miR-64b-5p | 6 | _......_ | 1 | 75 |
MIMAT0011635 | crm-miR-66-5p | 6 | _......_ | 1 | 75 |
MIMAT0011484 | cbr-miR-65-5p | 6 | _......_ | 1 | 75 |
MIMAT0011280 | sme-miR-2178 | 8 | ......__ | 3 | 75 |
MIMAT0008267 | ptr-miR-598 | 3 | ......__ | 8 | 75 |
MIMAT0006455 | mml-miR-598-3p | 3 | ......__ | 8 | 75 |
MIMAT0005325 | rno-miR-598-3p | 3 | ......__ | 8 | 75 |
MIMAT0005286 | rno-miR-878 | 7 | _......_ | 2 | 75 |
MIMAT0005254 | smo-miR1098 | 8 | ......__ | 3 | 75 |
MIMAT0004942 | mmu-miR-598-3p | 3 | ......__ | 8 | 75 |
MIMAT0004933 | mmu-miR-878-3p | 7 | _......_ | 2 | 75 |
MIMAT0004264 | ath-miR842 | 1 | __...... | 6 | 75 |
MIMAT0004829 | ppt-miR1211-3p | 8 | _......_ | 3 | 75 |
MIMAT0003497 | mmu-miR-707 | 3 | _......_ | 8 | 75 |
MIMAT0003266 | hsa-miR-598-3p | 3 | ......__ | 8 | 75 |
MIMAT0015188 | zma-miR167g-3p | 2 | _......_ | 7 | 75 |
MIMAT0015144 | zma-miR167d-3p | 2 | _......_ | 7 | 75 |
MIMAT0001292 | cbr-miR-64a | 6 | _......_ | 1 | 75 |
MIMAT0022887 | osa-miR166j-5p | 8 | ......__ | 3 | 75 |
MIMAT0022874 | osa-miR167h-3p | 3 | _......_ | 8 | 75 |
MIMAT0022860 | osa-miR167c-3p | 2 | _......_ | 7 | 75 |
MIMAT0000038 | cel-miR-66-5p | 6 | _......_ | 1 | 75 |