Result for your query miRNA sequence
>hsv2-miR-h4-3p
cgugcuu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgtgctt7
MIMAT0035811tae-miR9657b-3p1.......7100
MIMAT0035807tae-miR9657c-3p1.......7100
MIMAT0032847ppc-miR-228-3p1.......7100
MIMAT0030720prd-miR-1-5p2.......8100
MIMAT0010204hsv2-miR-H4-3p2.......8100
MIMAT0019092tca-miR-1-5p2.......8100
MIMAT0007458gga-miR-1595-5p7.......1100
MIMAT0015222bmo-miR-1a-5p2.......8100
MIMAT0037247ata-miR9783-3p8_......385
MIMAT0037028ssc-miR-9810-3p8......_385
MIMAT0036999tae-miR97838_......385
MIMAT0036836oha-miR-218-5p3_......885
MIMAT0036514tch-miR-218-5p3_......885
MIMAT0036418ggo-miR-519b3_......885
MIMAT0036409ggo-miR-520f3_......885
MIMAT0036144chi-miR-330-3p8_......385
MIMAT0036066chi-miR-2183_......885
MIMAT0035871bra-miR164e-3p3......_885
MIMAT0035765tae-miR9657a-3p2_......785
MIMAT0035068efu-miR-218b3_......885
MIMAT0035036efu-miR-218a3_......885
MIMAT0034880efu-miR-92603......_885
MIMAT0034605eca-miR-90608......_385
MIMAT0032807cel-miR-8197-5p2_......785
MIMAT0032524ssa-miR-218-5p3_......885
MIMAT0031751bma-miR-496_......185
MIMAT0031222stu-miR8041b-5p1_......685
MIMAT0031221stu-miR8041a-5p1_......685
MIMAT0030213bdi-miR7738-3p1_......685
MIMAT0030045oar-miR-218a3_......885
MIMAT0032195lva-miR-29a-3p6_......185
MIMAT0032145pmi-miR-29a-3p6_......185
MIMAT0029745cbn-miR-496_......185
MIMAT0029473ipu-miR-218b3_......885
MIMAT0029472ipu-miR-218a3_......885
MIMAT0026272ccr-miR-218b3_......885
MIMAT0026271ccr-miR-218a3_......885
MIMAT0027957mmu-miR-7026-3p2_......785
MIMAT0027921mmu-miR-7008-3p2_......785
MIMAT0027907mmu-miR-7002-3p3_......885
MIMAT0027571hsa-miR-6835-3p8_......385
MIMAT0025371ssc-miR-2183_......885
MIMAT0023855cgr-miR-218a3_......885
MIMAT0023250gma-miR2606b8_......385
MIMAT0023226gma-miR2606a8_......385
MIMAT0022609ola-miR-218b3_......885
MIMAT0022529ola-miR-218a3_......885
MIMAT0022325cin-miR-5601-5p3_......885
MIMAT0021880aca-miR-218-5p3_......885
MIMAT0021460asu-miR-49-3p6_......185
MIMAT0020589ssc-miR-218b3_......885
MIMAT0020048sko-miR-2006-3p6_......185
MIMAT0019531pma-miR-218b3_......885
MIMAT0019529pma-miR-218a-5p3_......885
MIMAT0019362hsa-miR-39771_......685
MIMAT0018874tca-miR-3888-5p1_......685
MIMAT0018549ame-miR-37737_......285
MIMAT0018020vvi-miR3628-3p8_......385
MIMAT0018008vvi-miR3623-3p3_......885
MIMAT0022961ssc-miR-218-5p3_......885
MIMAT0016074ppy-miR-6362_......785
MIMAT0015974ppy-miR-520f3_......885
MIMAT0017605aly-miR825-5p8_......385
MIMAT0014522tgu-miR-218-5p3_......885
MIMAT0014280aae-miR-988-5p3_......885
MIMAT0015319zma-miR164g-3p3......_885
MIMAT0012928eca-miR-2183_......885
MIMAT0011508crm-miR-496_......185
MIMAT0011445cel-miR-2215-5p8......_385
MIMAT0011256sme-miR-2162-5p2_......785
MIMAT0009656spu-miR-29a6_......185
MIMAT0009615sko-miR-33-3p3_......885
MIMAT0009278bta-miR-302a3_......885
MIMAT0008202ptr-miR-520f3_......885
MIMAT0006672cfa-miR-2183_......885
MIMAT0006479mml-miR-6362_......785
MIMAT0006815oan-miR-218-5p3_......885
MIMAT0005425cre-miR1168.26......_185
MIMAT0005207ppt-miR1076-3p8_......385
MIMAT0004133mdo-miR-218-5p3_......885
MIMAT0003798bta-miR-2183_......885
MIMAT0003631xtr-miR-2183_......885
MIMAT0003376mmu-miR-302c-3p3_......885
MIMAT0003306hsa-miR-6362_......785
MIMAT0022927osa-miR535-3p1_......685
MIMAT0002994tni-miR-218a3_......885
MIMAT0002993fru-miR-218a3_......885
MIMAT0002986tni-miR-218b3_......885
MIMAT0002985fru-miR-218b3_......885
MIMAT0002830hsa-miR-520f-3p3_......885
MIMAT0002574mml-miR-218-5p3_......885
MIMAT0002573mne-miR-2183_......885
MIMAT0002572lla-miR-2183_......885
MIMAT0002571sla-miR-2183_......885
MIMAT0002570ptr-miR-2183_......885
MIMAT0002569ppy-miR-2183_......885
MIMAT0002568lca-miR-2183_......885
MIMAT0002567ppa-miR-2183_......885
MIMAT0002566age-miR-2183_......885
MIMAT0002565ggo-miR-2183_......885
MIMAT0001869dre-miR-218b3_......885
MIMAT0001868dre-miR-218a3_......885
MIMAT0001144gga-miR-218-5p3_......885
MIMAT0001143gga-miR-302a3_......885
MIMAT0000888rno-miR-218a-5p3_......885
MIMAT0000663mmu-miR-218-5p3_......885
MIMAT0000474cbr-miR-496_......185
MIMAT0000275hsa-miR-218-5p3_......885
MIMAT0000020cel-miR-49-3p6_......185