Result for your query miRNA sequence
>rlcv-miR-rl1-22-5p
cguggggg

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgtggggg8
MIMAT0016238ppy-miR-19091........8100
MIMAT0019189rlcv-miR-rL1-22-5p1........8100
MIMAT0035750rno-miR-5132-5p1......._787
MIMAT0031551ppe-miR8128-3p2......._887
MIMAT0028740mdo-miR-7364-5p1_.......787
MIMAT0027862mmu-miR-6980-5p1_.......787
MIMAT0025311prv-miR-LLT81_.......787
MIMAT0020763bdi-miR50548......._287
MIMAT0020643mmu-miR-5132-5p2......._887
MIMAT0018999hsa-miR-44722_.......887
MIMAT0018966hsa-miR-44472_.......887
MIMAT0016199ppy-miR-12751_.......787
MIMAT0007996ptr-miR-12751_.......787
MIMAT0005929hsa-miR-12751_.......787
MIMAT0013934ssc-miR-361-3p8.c......187
MIMAT0017199rno-miR-361-3p8.c......187
MIMAT0036891oha-miR-30b-3p2__......775
MIMAT0036566tch-miR-491-5p2_......_775
MIMAT0036251chi-miR-491-5p2_......_775
MIMAT0036172chi-miR-361-3p7__......275
MIMAT0034988efu-miR-93133__......875
MIMAT0034985efu-miR-46671__......675
MIMAT0034905efu-miR-92727_......_275
MIMAT0034860efu-miR-9246a8......__375
MIMAT0034774efu-miR-91942__......775
MIMAT0034481eca-miR-89528__......375
MIMAT0034035gra-miR7486d1__......675
MIMAT0033708pxy-miR-84981_......_675
MIMAT0032780ath-miR81811__......675
MIMAT0031616bbe-miR-2058-3p3_......_875
MIMAT0029056gga-miR-7451-5p1......__675
MIMAT0028982oan-miR-7417-5p8_......_375
MIMAT0031050mdo-miR-92a-2-5p3_......_875
MIMAT0028606mdo-miR-7306-5p2__......775
MIMAT0028392mmu-miR-7212-5p3__......875
MIMAT0028364mml-miR-7200-5p7__......275
MIMAT0028186dev-miR-D13-5p3......__875
MIMAT0028168hcmv-miR-US29-3p6......__175
MIMAT0028135mmu-miR-7119-5p2__......775
MIMAT0028131mmu-miR-7117-5p3__......875
MIMAT0028119hsa-miR-7111-5p1__......675
MIMAT0028117hsa-miR-7110-5p1__......675
MIMAT0028115hsa-miR-7109-5p2__......775
MIMAT0028084mmu-miR-7089-5p2......__775
MIMAT0028076mmu-miR-7085-5p3_......_875
MIMAT0028052mmu-miR-7073-5p1__......675
MIMAT0028044mmu-miR-7069-5p2__......775
MIMAT0027952mmu-miR-7024-5p2__......775
MIMAT0027950mmu-miR-7023-5p2__......775
MIMAT0027916mmu-miR-7006-5p1__......675
MIMAT0027910mmu-miR-7003-5p2_......_775
MIMAT0027844mmu-miR-6971-5p1__......675
MIMAT0027782mmu-miR-6941-5p2__......775
MIMAT0027720mmu-miR-6910-5p1__......675
MIMAT0027694mmu-miR-6897-5p1__......675
MIMAT0027674hsa-miR-6887-5p1__......675
MIMAT0027640hsa-miR-6870-5p1__......675
MIMAT0027606hsa-miR-6853-5p3......__875
MIMAT0027596hsa-miR-6848-5p1__......675
MIMAT0027592hsa-miR-6846-5p1__......675
MIMAT0027586hsa-miR-6842-5p1__......675
MIMAT0027506hsa-miR-6803-5p2__......775
MIMAT0027492hsa-miR-6796-5p3_......_875
MIMAT0027490hsa-miR-6795-5p1__......675
MIMAT0027402hsa-miR-6751-5p2__......775
MIMAT0027385hsa-miR-6742-5p2_......_775
MIMAT0025825gga-miR-6622-3p2_......_775
MIMAT0025721gga-miR-6625-5p1__......675
MIMAT0025688gga-miR-6594-5p1__......675
MIMAT0025332pde-miR3967......__275
MIMAT0027288ppe-miR477b-3p3__......875
MIMAT0027287ppe-miR477a-3p3__......875
MIMAT0024575bta-miR-42867_......_275
MIMAT0027114mml-miR-1296-3p3_......_875
MIMAT0024259ggo-miR-31512_......_775
MIMAT0024196ggo-miR-4912_......_775
MIMAT0024031ptr-miR-31512_......_775
MIMAT0023539ame-miR-6000a-5p1......__675
MIMAT0023451hco-miR-59491......__675
MIMAT0023265osa-miR57972......__775
MIMAT0023227gma-miR482e3__......875
MIMAT0022491hsa-miR-56981__......675
MIMAT0022079aca-miR-54538_......_375
MIMAT0021671gma-miR482d-5p3__......875
MIMAT0021275mtr-miR52662__......775
MIMAT0020640mmu-miR-5129-5p3_......_875
MIMAT0020592ssc-miR-4912_......_775
MIMAT0019904hsa-miR-4758-3p8_......_375
MIMAT0019838hsa-miR-4723-5p1__......675
MIMAT0019739hsa-miR-4665-5p2__......775
MIMAT0019622pma-miR-45891_......_675
MIMAT0019356mmu-miR-39718_......_375
MIMAT0018286gma-miR482b-5p3__......875
MIMAT0018904tca-miR-3900-5p1__......675
MIMAT0018790tca-miR-3859-5p7_......_275
MIMAT0018654tca-miR-3815-5p1__......675
MIMAT0018101hsa-miR-3677-3p3......__875
MIMAT0017976ssc-miR-1296-3p3_......_875
MIMAT0016916hsa-miR-42867_......_275
MIMAT0016159ppy-miR-1224-3p6_......_175
MIMAT0016075ppy-miR-6373__......875
MIMAT0015911ppy-miR-491-5p2_......_775
MIMAT0015849ppy-miR-361-3p7__......275
MIMAT0015024hsa-miR-3151-5p2_......_775
MIMAT0031032tgu-miR-92-2-5p1_......_675
MIMAT0013846bta-miR-28882_......_775
MIMAT0013209eca-miR-361-3p7__......275
MIMAT0013116eca-miR-491-5p2_......_775
MIMAT0012035bta-miR-2454-5p2__......775
MIMAT0012032bta-miR-1777a1__......675
MIMAT0012005bta-miR-24331__......675
MIMAT0012002bta-miR-2431-3p8__......375
MIMAT0019167bfl-miR-2058-3p3_......_875
MIMAT0009332bta-miR-4912_......_775
MIMAT0008293ptr-miR-6373__......875
MIMAT0008115ptr-miR-3617__......275
MIMAT0006501mml-miR-6627......__275
MIMAT0006352mml-miR-491-5p2_......_775
MIMAT0006287mml-miR-361-3p7__......275
MIMAT0026837mml-miR-194-3p3_......_875
MIMAT0026809mml-miR-92a-5p3_......_875
MIMAT0007727gga-miR-18092......__775
MIMAT0007683gga-miR-1773-5p1__......675
MIMAT0007457gga-miR-15943_......_875
MIMAT0015245cin-miR-1473-5p7......__275
MIMAT0006857oan-miR-92a-1-5p3_......_875
MIMAT0005581mml-miR-12271_......_675
MIMAT0022941hsa-miR-1227-5p1_......_675
MIMAT0005571mml-miR-1224-3p6_......_175
MIMAT0005569ptr-miR-1224-3p6_......_175
MIMAT0005545mcmv-miR-M23-2-3p2__......775
MIMAT0032027dme-miR-1004-5p3__......875
MIMAT0009207mdv1-miR-M3-3p1__......675
MIMAT0015238kshv-miR-K12-12-3p1__......675
MIMAT0003901ppt-miR12121......__675
MIMAT0003486mmu-miR-491-5p2_......_775
MIMAT0003891mmu-miR-770-3p1......__675
MIMAT0017231mmu-miR-1224-3p6_......_175
MIMAT0026637hsa-miR-1296-3p3_......_875
MIMAT0005459hsa-miR-1224-3p6_......_175
MIMAT0003325hsa-miR-6627......__275
MIMAT0003307hsa-miR-6373__......875
MIMAT0002807hsa-miR-491-5p2_......_775
MIMAT0001587osa-miR4388......__375
MIMAT0026512gga-miR-30b-3p2__......775
MIMAT0017108rno-miR-92a-2-5p3_......_875
MIMAT0017075mmu-miR-361-3p7__......275
MIMAT0004682hsa-miR-361-3p7__......275
MIMAT0004635mmu-miR-92a-2-5p3_......_875
MIMAT0004508hsa-miR-92a-2-5p3_......_875