Result for your query miRNA sequence
>rrv-miR-rr1-4-3p
cucguuaa

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ctcgttaa8
MIMAT0035398nve-miR-94378........1100
MIMAT0004411rrv-miR-rR1-4-3p1........8100
MIMAT0018315gma-miR43997_.......187
MIMAT0014758api-miR-30222......._887
MIMAT0032064dvi-miR-13b-5p1_.......787
MIMAT0020796dme-miR-13b-1-5p1_.......787
MIMAT0037276ame-miR-98726......__175
MIMAT0035689bra-miR9565-5p2......__775
MIMAT0035462sly-miR9473-3p7......__275
MIMAT0035335gsa-miR-76b-3p2_......_775
MIMAT0034243gra-miR8762c6__......175
MIMAT0034194gra-miR8762b6__......175
MIMAT0034193gra-miR7502e6__......175
MIMAT0033633sma-miR-8459-5p6_......_175
MIMAT0033472str-miR-87b-5p1__......675
MIMAT0033400str-miR-8377-5p7__......275
MIMAT0031567ppe-miR8581......__675
MIMAT0030844prd-miR-7971-5p3__......875
MIMAT0028158ssc-miR-7141-3p8__......375
MIMAT0026342bma-miR-58446_......_175
MIMAT0026083cme-miR8582......__775
MIMAT0028021mmu-miR-7058-3p1......__675
MIMAT0023436hco-miR-59416_......_175
MIMAT0023137mtr-miR57558__......375
MIMAT0020766sly-miR5302a7......__275
MIMAT0020575osa-miR50782......__775
MIMAT0018621tca-miR-3802-3p2_......_775
MIMAT0018598ame-miR-37308......__375
MIMAT0018593ame-miR-37266......__175
MIMAT0016724cin-miR-4129-3p3__......875
MIMAT0016640cin-miR-4076-5p7......__275
MIMAT0016968cin-miR-4006a-2-3p2_......_775
MIMAT0016466cin-miR-4003c-3p6_......_175
MIMAT0015532bmo-miR-33453_......_875
MIMAT0011595crm-miR-67-5p3......__875
MIMAT0010042osa-miR1846e7......__275
MIMAT0010031mtr-miR1507-3p2......__775
MIMAT0009789nve-miR-2033-3p3......__875
MIMAT0006031odi-miR-14797......__275
MIMAT0001005ath-miR4047__......275
MIMAT0020800dme-miR-274-3p1......__675