Result for your query miRNA sequence
>hiv1-miR-tar-3p
cucuggc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ctctggc7
MIMAT0034812efu-miR-92202.......8100
MIMAT0034521eca-miR-89841.......7100
MIMAT0020440tcc-miR399f8.......2100
MIMAT0006017hiv1-miR-TAR-3p2.......8100
MIMAT0036763oha-miR-181b-3p3......_885
MIMAT0036412ggo-miR-525-5p8......_385
MIMAT0035805tae-miR9678-3p1_......685
MIMAT0035726rno-miR-149-5p1_......685
MIMAT0035021efu-miR-1491_......685
MIMAT0034689eca-miR-91382_......785
MIMAT0034556eca-miR-90158......_385
MIMAT0034455eca-miR-89271_......685
MIMAT0034342cfa-miR-88478......_385
MIMAT0033810pxy-miR-2525-3p1_......685
MIMAT0031686bbe-miR-4864-3p7_......285
MIMAT0029907mmu-miR-7688-3p1_......685
MIMAT0029811mmu-miR-7652-3p1_......685
MIMAT0029123hcmv-miR-UL696......_185
MIMAT0028737mdo-miR-7362-3p6......_185
MIMAT0028562mdo-miR-7290-5p1_......685
MIMAT0026362bma-miR-58636_......185
MIMAT0025744gga-miR-6647-5p3......_885
MIMAT0025672gga-miR-6582-3p3......_885
MIMAT0025464hsa-miR-6504-5p1_......685
MIMAT0025459hsa-miR-6501-3p6......_185
MIMAT0025229ptc-miR64281_......685
MIMAT0025141mmu-miR-6392-5p1_......685
MIMAT0024809hvu-miR61851_......685
MIMAT0024570bta-miR-149-5p1_......685
MIMAT0024144ggo-miR-1491_......685
MIMAT0023780cgr-miR-149-5p1_......685
MIMAT0022374mmu-miR-5623-3p3_......885
MIMAT0022148osa-miR55148......_385
MIMAT0022048aca-miR-54273_......885
MIMAT0021551asu-miR-5349-3p1_......685
MIMAT0021292mtr-miR5268b6......_185
MIMAT0021291mtr-miR5268a6......_185
MIMAT0020098bfl-miR-4864-3p8_......385
MIMAT0019967hsa-miR-47941_......685
MIMAT0019900hsa-miR-4756-3p6......_185
MIMAT0019864hsa-miR-3064-5p1_......685
MIMAT0019557pma-miR-497-3p6......_185
MIMAT0018379ssc-miR-1491_......685
MIMAT0018197hsa-miR-3922-3p1_......685
MIMAT0016878hsa-miR-42576......_185
MIMAT0016868hsa-miR-43141......_685
MIMAT0017805rno-miR-30851_......685
MIMAT0015982ppy-miR-525-5p8......_385
MIMAT0015969ppy-miR-520c-5p1......_685
MIMAT0015966ppy-miR-520a-5p8......_385
MIMAT0015955ppy-miR-518d-5p1......_685
MIMAT0015773ppy-miR-1491_......685
MIMAT0015404bmo-miR-3223-3p3......_885
MIMAT0022732hsa-miR-3191-5p3......_885
MIMAT0015073hsa-miR-3190-5p1_......685
MIMAT0014991hsa-miR-31281_......685
MIMAT0015377hsa-miR-3126-3p3_......885
MIMAT0014879mmu-miR-3085-3p1_......685
MIMAT0014834mmu-miR-3064-5p1_......685
MIMAT0013831osa-miR28796_......185
MIMAT0012973eca-miR-1491_......685
MIMAT0012322dps-miR-25332_......785
MIMAT0012052bta-miR-2464-3p8......_385
MIMAT0012044bta-miR-24596_......185
MIMAT0012013bta-miR-2439-5p1_......685
MIMAT0011798bta-miR-22903......_885
MIMAT0011456cel-miR-2218a-3p8_......385
MIMAT0009884cfa-miR-1491_......685
MIMAT0009814nve-miR-2045-5p8......_385
MIMAT0008043ptr-miR-1491_......685
MIMAT0006402mml-miR-5258......_385
MIMAT0006210mml-miR-149-5p1_......685
MIMAT0007708gga-miR-17946_......185
MIMAT0007591gga-miR-16996......_185
MIMAT0006927oan-miR-1420d-5p2_......785
MIMAT0026748mml-miR-514a-5p3......_885
MIMAT0022702hsa-miR-514a-5p3......_885
MIMAT0002838hsa-miR-525-5p8......_385
MIMAT0002833hsa-miR-520a-5p8......_385
MIMAT0000450hsa-miR-149-5p1_......685
MIMAT0000159mmu-miR-149-5p1_......685