VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hvt-miR-h5
cuggugc

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`ctggtgc`	7
MIMAT0034952	efu-miR-9292	8	`.......`	2	100
MIMAT0034679	eca-miR-9128	1	`.......`	7	100
MIMAT0031620	bbe-miR-2060b-3p	7	`.......`	1	100
MIMAT0021104	osa-miR5154	8	`.......`	2	100
MIMAT0012716	hvt-miR-H5-5p	2	`.......`	8	100
MIMAT0011163	hsa-miR-548q	2	`.......`	8	100
MIMAT0037070	ssc-miR-9851-3p	8	`_......`	3	85
MIMAT0036879	oha-miR-29b-3p	8	`_......`	3	85
MIMAT0036877	oha-miR-29a-3p	8	`_......`	3	85
MIMAT0036710	oha-miR-138-5p	3	`......_`	8	85
MIMAT0036546	tch-miR-29c-3p	8	`_......`	3	85
MIMAT0036511	tch-miR-29a-3p	8	`_......`	3	85
MIMAT0036494	tch-miR-29b-3p	8	`_......`	3	85
MIMAT0036293	chi-miR-767	7	`_......`	2	85
MIMAT0036117	chi-miR-29c-3p	8	`_......`	3	85
MIMAT0036115	chi-miR-29b-3p	8	`_......`	3	85
MIMAT0036113	chi-miR-29a-3p	8	`_......`	3	85
MIMAT0035613	dvi-miR-998-3p	8	`_......`	3	85
MIMAT0035609	dvi-miR-995-3p	8	`_......`	3	85
MIMAT0035063	efu-miR-138a	3	`......_`	8	85
MIMAT0035034	efu-miR-138b	3	`......_`	8	85
MIMAT0034930	efu-miR-9282	1	`_......`	6	85
MIMAT0034780	efu-miR-9198b	3	`_......`	8	85
MIMAT0034704	eca-miR-1911	6	`......_`	1	85
MIMAT0034526	eca-miR-8989	1	`......_`	6	85
MIMAT0033868	atr-miR8583	6	`_......`	1	85
MIMAT0033583	sma-miR-8439-3p	2	`_......`	7	85
MIMAT0032957	ppc-miR-8246-3p	3	`_......`	8	85
MIMAT0032887	ppc-miR-83-3p	8	`_......`	3	85
MIMAT0032591	ssa-miR-29c-3p	8	`_......`	3	85
MIMAT0032586	ssa-miR-29b-3p	8	`_......`	3	85
MIMAT0032584	ssa-miR-29a-3p	8	`_......`	3	85
MIMAT0032352	ssa-miR-138-5p	3	`......_`	8	85
MIMAT0031751	bma-miR-49	8	`_......`	3	85
MIMAT0031694	bbe-miR-4868c-3p	1	`......_`	6	85
MIMAT0031665	bbe-miR-29b-3p	8	`_......`	3	85
MIMAT0031663	bbe-miR-29a-3p	8	`_......`	3	85
MIMAT0031619	bbe-miR-2060a-3p	6	`_......`	1	85
MIMAT0031532	ppe-miR8124-3p	8	`_......`	3	85
MIMAT0030741	prd-miR-49-3p	8	`_......`	3	85
MIMAT0030442	bta-miR-7862	1	`_......`	6	85
MIMAT0030243	bdi-miR7751-3p	3	`_......`	8	85
MIMAT0030054	oar-miR-29b	8	`_......`	3	85
MIMAT0032196	lva-miR-29b-3p	8	`_......`	3	85
MIMAT0032195	lva-miR-29a-3p	8	`_......`	3	85
MIMAT0032146	pmi-miR-29b-3p	8	`_......`	3	85
MIMAT0032145	pmi-miR-29a-3p	8	`_......`	3	85
MIMAT0029746	cbn-miR-83	8	`_......`	3	85
MIMAT0029745	cbn-miR-49	8	`_......`	3	85
MIMAT0029414	ipu-miR-138	3	`......_`	8	85
MIMAT0031149	aja-miR-29c	8	`_......`	3	85
MIMAT0031135	aja-miR-29b	8	`_......`	3	85
MIMAT0028759	mdo-miR-7368-3p	6	`......_`	1	85
MIMAT0026287	ccr-miR-29b	8	`_......`	3	85
MIMAT0026286	ccr-miR-29a	8	`_......`	3	85
MIMAT0026218	ccr-miR-138	3	`......_`	8	85
MIMAT0027406	hsa-miR-6753-5p	6	`......_`	1	85
MIMAT0025864	blv-miR-B4-3p	8	`_......`	3	85
MIMAT0025812	gga-miR-6702-5p	6	`......_`	1	85
MIMAT0025363	ssc-miR-138	3	`......_`	8	85
MIMAT0025001	hme-miR-998	8	`_......`	3	85
MIMAT0024970	hme-miR-285	8	`_......`	3	85
MIMAT0024436	mse-miR-285	8	`_......`	3	85
MIMAT0024423	mse-miR-998	8	`_......`	3	85
MIMAT0024305	ggo-miR-675b	1	`_......`	6	85
MIMAT0024212	ggo-miR-767	7	`_......`	2	85
MIMAT0024098	ggo-miR-138	3	`......_`	8	85
MIMAT0024084	ggo-miR-29c	8	`_......`	3	85
MIMAT0024032	ptr-miR-767	7	`_......`	2	85
MIMAT0023888	cgr-miR-29c-3p	8	`_......`	3	85
MIMAT0023886	cgr-miR-29b-3p	8	`_......`	3	85
MIMAT0023884	cgr-miR-29a-3p	8	`_......`	3	85
MIMAT0023764	cgr-miR-138	3	`......_`	8	85
MIMAT0023355	hco-miR-83	8	`_......`	3	85
MIMAT0022771	sha-miR-138	3	`......_`	8	85
MIMAT0022656	ola-miR-29c	8	`_......`	3	85
MIMAT0022570	ola-miR-29a	7	`_......`	2	85
MIMAT0022569	ola-miR-29b	8	`_......`	3	85
MIMAT0022554	ola-miR-138	3	`......_`	8	85
MIMAT0021914	aca-miR-29b	8	`_......`	3	85
MIMAT0021912	aca-miR-29a-3p	8	`_......`	3	85
MIMAT0021757	aca-miR-138-5p	3	`......_`	8	85
MIMAT0021476	asu-miR-83-3p	8	`_......`	3	85
MIMAT0021460	asu-miR-49-3p	8	`_......`	3	85
MIMAT0020106	bfl-miR-4868c-5p	1	`......_`	6	85
MIMAT0020067	spu-miR-29b	8	`_......`	3	85
MIMAT0019470	pma-miR-138b	3	`......_`	8	85
MIMAT0019469	pma-miR-138a	3	`......_`	8	85
MIMAT0019421	pma-miR-29d-3p	8	`_......`	3	85
MIMAT0019419	pma-miR-29c	8	`_......`	3	85
MIMAT0019418	pma-miR-29b	8	`_......`	3	85
MIMAT0019417	pma-miR-29a-3p	8	`_......`	3	85
MIMAT0018401	ngi-miR-29b	8	`_......`	3	85
MIMAT0018853	tca-miR-998-3p	8	`_......`	3	85
MIMAT0018803	tca-miR-29-3p	8	`_......`	3	85
MIMAT0018629	tca-miR-995-3p	8	`_......`	3	85
MIMAT0018568	ame-miR-3789	3	`......_`	8	85
MIMAT0018008	vvi-miR3623-3p	1	`_......`	6	85
MIMAT0016976	cin-miR-4014-2-5p	6	`_......`	1	85
MIMAT0016402	cin-miR-29-3p	8	`_......`	3	85
MIMAT0016107	ppy-miR-767-5p	7	`_......`	2	85
MIMAT0016098	ppy-miR-675a	1	`_......`	6	85
MIMAT0015760	ppy-miR-138	3	`......_`	8	85
MIMAT0015735	ppy-miR-29c	8	`_......`	3	85
MIMAT0015656	nvi-miR-29b	8	`_......`	3	85
MIMAT0014967	oar-miR-29a	8	`_......`	3	85
MIMAT0014934	mmu-miR-3102-5p.2-5p	3	`_......`	8	85
MIMAT0014849	mmu-miR-3070-2-3p	1	`_......`	6	85
MIMAT0014847	mmu-miR-3070-3p	1	`_......`	6	85
MIMAT0014796	api-miR-3045b	3	`......_`	8	85
MIMAT0014747	api-miR-998	8	`_......`	3	85
MIMAT0014726	api-miR-29	8	`_......`	3	85
MIMAT0014601	tgu-miR-29b-3p	8	`_......`	3	85
MIMAT0014532	tgu-miR-29a-3p	8	`_......`	3	85
MIMAT0014515	tgu-miR-138-5p	3	`......_`	8	85
MIMAT0014456	tgu-miR-2958	3	`......_`	8	85
MIMAT0014445	cqu-miR-998	8	`_......`	3	85
MIMAT0014411	cqu-miR-285-3p	8	`_......`	3	85
MIMAT0014273	aae-miR-285	8	`_......`	3	85
MIMAT0014227	aae-miR-998	8	`_......`	3	85
MIMAT0013245	eca-miR-767-5p	7	`_......`	2	85
MIMAT0013174	eca-miR-770-5p	7	`_......`	2	85
MIMAT0012964	eca-miR-29c	8	`_......`	3	85
MIMAT0012957	eca-miR-1905b	6	`......_`	1	85
MIMAT0012941	eca-miR-29b	8	`_......`	3	85
MIMAT0012940	eca-miR-29a	8	`_......`	3	85
MIMAT0012925	eca-miR-138	3	`......_`	8	85
MIMAT0012841	rno-miR-675-5p	1	`_......`	6	85
MIMAT0012773	mmu-miR-767	7	`_......`	2	85
MIMAT0013603	bmo-miR-998	8	`_......`	3	85
MIMAT0012695	isc-miR-285	8	`_......`	3	85
MIMAT0012656	dpu-miR-285	8	`_......`	3	85
MIMAT0012454	dsi-miR-995-3p	8	`_......`	3	85
MIMAT0012272	dps-miR-995-3p	8	`_......`	3	85
MIMAT0011515	crm-miR-83	8	`_......`	3	85
MIMAT0011508	crm-miR-49	8	`_......`	3	85
MIMAT0010069	osa-miR2102-3p	3	`_......`	8	85
MIMAT0009656	spu-miR-29a	8	`_......`	3	85
MIMAT0009613	sko-miR-29b-3p	8	`_......`	3	85
MIMAT0009612	sko-miR-29a	8	`_......`	3	85
MIMAT0009565	lgi-miR-29	8	`_......`	3	85
MIMAT0009514	cte-miR-29b	8	`_......`	3	85
MIMAT0009513	cte-miR-29a	8	`_......`	3	85
MIMAT0009472	bfl-miR-29b-3p	7	`_......`	2	85
MIMAT0009471	bfl-miR-29a-3p	8	`_......`	3	85
MIMAT0009154	bmo-miR-285	8	`_......`	3	85
MIMAT0009375	bta-miR-767	7	`_......`	2	85
MIMAT0009275	bta-miR-29d-3p	8	`_......`	3	85
MIMAT0009088	dya-miR-285	8	`_......`	3	85
MIMAT0008984	dwi-miR-285	8	`_......`	3	85
MIMAT0008969	dvi-miR-285-3p	8	`_......`	3	85
MIMAT0008888	dsi-miR-285	8	`_......`	3	85
MIMAT0008809	dse-miR-285	8	`_......`	3	85
MIMAT0008651	dmo-miR-285	8	`_......`	3	85
MIMAT0008581	dgr-miR-285	8	`_......`	3	85
MIMAT0008514	der-miR-285	8	`_......`	3	85
MIMAT0008419	dan-miR-285	8	`_......`	3	85
MIMAT0008082	ptr-miR-29c	8	`_......`	3	85
MIMAT0008034	ptr-miR-138	3	`......_`	8	85
MIMAT0007886	hsa-miR-1911-3p	6	`......_`	1	85
MIMAT0007866	mmu-miR-1905	6	`......_`	1	85
MIMAT0006705	cfa-miR-29c	8	`_......`	3	85
MIMAT0006654	cfa-miR-138a	3	`......_`	8	85
MIMAT0006646	cfa-miR-138b	3	`......_`	8	85
MIMAT0006626	cfa-miR-29a	8	`_......`	3	85
MIMAT0006625	cfa-miR-29b	8	`_......`	3	85
MIMAT0006510	mml-miR-767-5p	7	`_......`	2	85
MIMAT0006507	mml-miR-675-5p	1	`_......`	6	85
MIMAT0006194	mml-miR-138-5p	3	`......_`	8	85
MIMAT0006169	mml-miR-29c-3p	8	`_......`	3	85
MIMAT0006168	mml-miR-29b-3p	8	`_......`	3	85
MIMAT0007216	oan-miR-138-5p	3	`......_`	8	85
MIMAT0006809	oan-miR-29b-3p	8	`_......`	3	85
MIMAT0006807	oan-miR-29a-3p	8	`_......`	3	85
MIMAT0005419	cre-miR1164	1	`_......`	6	85
MIMAT0005338	rno-miR-770-5p	7	`_......`	2	85
MIMAT0004464	mdv2-miR-M21-3p	8	`_......`	3	85
MIMAT0005518	dme-miR-998-3p	8	`_......`	3	85
MIMAT0005514	dme-miR-995-3p	8	`_......`	3	85
MIMAT0004427	ame-miR-29b	8	`_......`	3	85
MIMAT0004284	hsa-miR-675-5p	1	`_......`	6	85
MIMAT0004164	mdo-miR-29a-3p	8	`_......`	3	85
MIMAT0004163	mdo-miR-29b-3p	8	`_......`	3	85
MIMAT0004111	mdo-miR-138	3	`......_`	8	85
MIMAT0003978	sme-miR-746-3p	8	`_......`	3	85
MIMAT0003829	bta-miR-29c	8	`_......`	3	85
MIMAT0003828	bta-miR-29b	8	`_......`	3	85
MIMAT0003813	bta-miR-138	3	`......_`	8	85
MIMAT0003677	xtr-miR-29c-3p	8	`_......`	3	85
MIMAT0003656	xtr-miR-29a	8	`_......`	3	85
MIMAT0003599	xtr-miR-138	3	`......_`	8	85
MIMAT0003573	xtr-miR-29b	8	`_......`	3	85
MIMAT0003572	xtr-miR-29d	8	`_......`	3	85
MIMAT0004822	mmu-miR-770-5p	7	`_......`	2	85
MIMAT0003725	mmu-miR-675-5p	1	`_......`	6	85
MIMAT0003882	hsa-miR-767-5p	7	`_......`	2	85
MIMAT0003433	rlcv-miR-rL1-5-3p	7	`_......`	2	85
MIMAT0003411	ebv-miR-BART3-3p	7	`_......`	2	85
MIMAT0003261	hsa-miR-593-5p	8	`_......`	3	85
MIMAT0003080	tni-miR-138	3	`......_`	8	85
MIMAT0003079	fru-miR-138	3	`......_`	8	85
MIMAT0003056	tni-miR-29b	8	`_......`	3	85
MIMAT0003055	fru-miR-29b	8	`_......`	3	85
MIMAT0003054	tni-miR-29a	8	`_......`	3	85
MIMAT0003053	fru-miR-29a	8	`_......`	3	85
MIMAT0026591	mml-miR-224-3p	2	`_......`	7	85
MIMAT0002441	mne-miR-29b	8	`_......`	3	85
MIMAT0002440	sla-miR-29b	8	`_......`	3	85
MIMAT0002439	ppa-miR-29b	8	`_......`	3	85
MIMAT0002438	age-miR-29b	8	`_......`	3	85
MIMAT0002437	lla-miR-29b	8	`_......`	3	85
MIMAT0002436	ggo-miR-29b	8	`_......`	3	85
MIMAT0002435	ptr-miR-29b	8	`_......`	3	85
MIMAT0002434	ppy-miR-29b	8	`_......`	3	85
MIMAT0002166	ssc-miR-29c	8	`_......`	3	85
MIMAT0002137	ssc-miR-29b	8	`_......`	3	85
MIMAT0001835	dre-miR-138-5p	3	`......_`	8	85
MIMAT0001802	dre-miR-29a	8	`_......`	3	85
MIMAT0001801	dre-miR-29b	8	`_......`	3	85
MIMAT0015158	zma-miR172c-5p	8	`_......`	3	85
MIMAT0015157	zma-miR172b-5p	8	`_......`	3	85
MIMAT0015156	zma-miR172d-5p	8	`_......`	3	85
MIMAT0001295	cbr-miR-83	8	`_......`	3	85
MIMAT0001249	dps-miR-285	8	`_......`	3	85
MIMAT0001183	gga-miR-29c-3p	8	`_......`	3	85
MIMAT0001122	gga-miR-138-5p	3	`......_`	8	85
MIMAT0001097	gga-miR-29b-3p	8	`_......`	3	85
MIMAT0001096	gga-miR-29a-3p	8	`_......`	3	85
MIMAT0000844	rno-miR-138-5p	3	`......_`	8	85
MIMAT0000803	rno-miR-29c-3p	8	`_......`	3	85
MIMAT0000802	rno-miR-29a-3p	8	`_......`	3	85
MIMAT0000801	rno-miR-29b-3p	8	`_......`	3	85
MIMAT0000681	hsa-miR-29c-3p	8	`_......`	3	85
MIMAT0000536	mmu-miR-29c-3p	8	`_......`	3	85
MIMAT0000535	mmu-miR-29a-3p	8	`_......`	3	85
MIMAT0000474	cbr-miR-49	8	`_......`	3	85
MIMAT0000430	hsa-miR-138-5p	3	`......_`	8	85
MIMAT0000356	dme-miR-285-3p	8	`_......`	3	85
MIMAT0000150	mmu-miR-138-5p	3	`......_`	8	85
MIMAT0000127	mmu-miR-29b-3p	8	`_......`	3	85
MIMAT0000100	hsa-miR-29b-3p	8	`_......`	3	85
MIMAT0000086	hsa-miR-29a-3p	8	`_......`	3	85
MIMAT0000056	cel-miR-83-3p	8	`_......`	3	85
MIMAT0000020	cel-miR-49-3p	8	`_......`	3	85