RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | cttcacta | 8 | ||
MIMAT0027316 | ppe-miR6285 | 8 | ........ | 1 | 100 |
MIMAT0030502 | prd-miR-1175-5p | 8 | ......._ | 2 | 87 |
MIMAT0026313 | ccr-miR-726 | 1 | _....... | 7 | 87 |
MIMAT0027577 | hsa-miR-6837-3p | 2 | ......._ | 8 | 87 |
MIMAT0025211 | ptc-miR6472 | 7 | _....... | 1 | 87 |
MIMAT0023525 | ath-miR5999 | 2 | ......._ | 8 | 87 |
MIMAT0021986 | aca-miR-726 | 1 | _....... | 7 | 87 |
MIMAT0018782 | tca-miR-3858-5p | 7 | ......._ | 1 | 87 |
MIMAT0017983 | hsa-miR-3606-5p | 8 | _....... | 2 | 87 |
MIMAT0007404 | gga-miR-1550-3p | 1 | ......._ | 7 | 87 |
MIMAT0005230 | smo-miR1080 | 1 | _....... | 7 | 87 |
MIMAT0003754 | dre-miR-726 | 1 | _....... | 7 | 87 |
MIMAT0034004 | gra-miR8646 | 8 | .c...... | 1 | 87 |
MIMAT0019575 | pma-miR-4545-5p | 1 | ......a. | 8 | 87 |
MIMAT0017988 | hsa-miR-3611 | 8 | ......a. | 1 | 87 |
MIMAT0037055 | ssc-miR-9837-5p | 1 | __...... | 6 | 75 |
MIMAT0036767 | oha-miR-183-3p | 7 | _......_ | 2 | 75 |
MIMAT0036218 | chi-miR-412-3p | 2 | ......__ | 7 | 75 |
MIMAT0036170 | chi-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0036168 | chi-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0035046 | efu-miR-34c | 3 | __...... | 8 | 75 |
MIMAT0034902 | efu-miR-9270 | 7 | ......__ | 2 | 75 |
MIMAT0034671 | eca-miR-9121 | 2 | ......__ | 7 | 75 |
MIMAT0034618 | eca-miR-9073 | 8 | _......_ | 3 | 75 |
MIMAT0033979 | gra-miR8633 | 8 | _......_ | 3 | 75 |
MIMAT0033454 | str-miR-37a-5p | 6 | _......_ | 1 | 75 |
MIMAT0033376 | str-miR-1175-5p | 8 | ......__ | 3 | 75 |
MIMAT0033371 | str-miR-252b-3p | 3 | ......__ | 8 | 75 |
MIMAT0033354 | str-miR-86-5p | 8 | _......_ | 3 | 75 |
MIMAT0033318 | str-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0033181 | ppc-miR-8320-3p | 1 | __...... | 6 | 75 |
MIMAT0033083 | ppc-miR-8287-5p | 2 | ......__ | 7 | 75 |
MIMAT0033007 | ppc-miR-71b-3p | 3 | __...... | 8 | 75 |
MIMAT0032431 | ssa-miR-183-2-3p | 6 | _......_ | 1 | 75 |
MIMAT0031762 | bma-miR-86 | 8 | _......_ | 3 | 75 |
MIMAT0031612 | bbe-miR-2056-3p | 2 | _......_ | 7 | 75 |
MIMAT0031378 | osa-miR6249b | 7 | ......__ | 2 | 75 |
MIMAT0030466 | prd-miR-86-5p | 8 | _......_ | 3 | 75 |
MIMAT0030461 | prd-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0030339 | hhi-miR-7794 | 7 | _......_ | 2 | 75 |
MIMAT0029751 | cbn-miR-785 | 8 | _......_ | 3 | 75 |
MIMAT0029750 | cbn-miR-86 | 8 | _......_ | 3 | 75 |
MIMAT0029609 | cbr-miR-785b | 8 | _......_ | 3 | 75 |
MIMAT0029505 | ipu-miR-34c | 3 | __...... | 8 | 75 |
MIMAT0028989 | oan-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0028986 | oan-miR-7419-5p | 2 | ......__ | 7 | 75 |
MIMAT0028960 | oan-miR-7407-5p | 6 | __...... | 1 | 75 |
MIMAT0028735 | mdo-miR-7361-3p | 1 | _......_ | 6 | 75 |
MIMAT0028723 | mdo-miR-7355-3p | 1 | ......__ | 6 | 75 |
MIMAT0028589 | mdo-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0028587 | mdo-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0028567 | mdo-miR-7291-3p | 2 | ......__ | 7 | 75 |
MIMAT0027409 | hsa-miR-6754-3p | 2 | ......__ | 7 | 75 |
MIMAT0025731 | gga-miR-6635-5p | 6 | ......__ | 1 | 75 |
MIMAT0025623 | gga-miR-6558-5p | 7 | _......_ | 2 | 75 |
MIMAT0025018 | hme-miR-6311-3p | 6 | __...... | 1 | 75 |
MIMAT0024985 | hme-miR-71 | 3 | __...... | 8 | 75 |
MIMAT0024871 | osa-miR6249a | 7 | ......__ | 2 | 75 |
MIMAT0024599 | hsa-miR-6126 | 6 | ......__ | 1 | 75 |
MIMAT0024506 | mse-miR-6098 | 7 | __...... | 2 | 75 |
MIMAT0024407 | ppy-miR-3174 | 6 | __...... | 1 | 75 |
MIMAT0023993 | cgr-miR-653 | 1 | _......_ | 6 | 75 |
MIMAT0023930 | cgr-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0023928 | cgr-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0023698 | hsa-miR-6073 | 8 | __...... | 3 | 75 |
MIMAT0023667 | ame-miR-6045 | 2 | _......_ | 7 | 75 |
MIMAT0023383 | hco-miR-5914 | 6 | __...... | 1 | 75 |
MIMAT0023350 | hco-miR-86 | 8 | _......_ | 3 | 75 |
MIMAT0023041 | tur-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0022365 | mmu-miR-5619-5p | 3 | __...... | 8 | 75 |
MIMAT0021944 | aca-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0021940 | aca-miR-34a-3p | 2 | __...... | 7 | 75 |
MIMAT0021479 | asu-miR-86-5p | 8 | _......_ | 3 | 75 |
MIMAT0021467 | asu-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0021268 | mtr-miR160f | 8 | ......__ | 3 | 75 |
MIMAT0021018 | hsa-miR-4999-3p | 1 | __...... | 6 | 75 |
MIMAT0019330 | oar-miR-412-5p | 1 | ......__ | 6 | 75 |
MIMAT0018222 | tae-miR395a | 6 | ......__ | 1 | 75 |
MIMAT0027033 | tgu-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0016646 | cin-miR-4078-3p | 1 | _......_ | 6 | 75 |
MIMAT0016608 | cin-miR-4060-5p | 3 | _......_ | 8 | 75 |
MIMAT0017814 | rno-miR-3553 | 7 | _......_ | 2 | 75 |
MIMAT0017809 | rno-miR-3551-5p | 2 | ......__ | 7 | 75 |
MIMAT0016256 | sja-miR-31-3p | 3 | ......__ | 8 | 75 |
MIMAT0016183 | ppy-miR-1257 | 6 | _......_ | 1 | 75 |
MIMAT0016131 | ppy-miR-921 | 7 | __...... | 2 | 75 |
MIMAT0015879 | ppy-miR-412 | 2 | ......__ | 7 | 75 |
MIMAT0015743 | ppy-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0015391 | bmo-miR-3212 | 1 | _......_ | 6 | 75 |
MIMAT0015385 | bmo-miR-3207 | 8 | ......__ | 3 | 75 |
MIMAT0015051 | hsa-miR-3174 | 6 | __...... | 1 | 75 |
MIMAT0014447 | cel-miR-2953-3p | 3 | __...... | 8 | 75 |
MIMAT0014401 | cqu-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0014221 | aae-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0014125 | osa-miR395y | 6 | ......__ | 1 | 75 |
MIMAT0014124 | osa-miR395x | 6 | ......__ | 1 | 75 |
MIMAT0016945 | rlcv-miR-rL1-23-5p | 1 | __...... | 6 | 75 |
MIMAT0014013 | zma-miR395p-3p | 6 | ......__ | 1 | 75 |
MIMAT0014012 | zma-miR395o-3p | 6 | ......__ | 1 | 75 |
MIMAT0014011 | zma-miR395n-3p | 6 | ......__ | 1 | 75 |
MIMAT0014010 | zma-miR395m-3p | 6 | ......__ | 1 | 75 |
MIMAT0014009 | zma-miR395l-3p | 6 | ......__ | 1 | 75 |
MIMAT0014008 | zma-miR395k-3p | 6 | ......__ | 1 | 75 |
MIMAT0014007 | zma-miR395j-3p | 6 | ......__ | 1 | 75 |
MIMAT0014006 | zma-miR395i-3p | 6 | ......__ | 1 | 75 |
MIMAT0014005 | zma-miR395h-3p | 6 | ......__ | 1 | 75 |
MIMAT0014004 | zma-miR395g-3p | 6 | ......__ | 1 | 75 |
MIMAT0014003 | zma-miR395f-3p | 6 | ......__ | 1 | 75 |
MIMAT0014002 | zma-miR395e-3p | 6 | ......__ | 1 | 75 |
MIMAT0014001 | zma-miR395d-3p | 6 | ......__ | 1 | 75 |
MIMAT0012991 | eca-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0017361 | rno-miR-653-3p | 1 | _......_ | 6 | 75 |
MIMAT0011662 | ppc-miR-86 | 8 | _......_ | 3 | 75 |
MIMAT0011619 | crm-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0011602 | crm-miR-785 | 8 | _......_ | 3 | 75 |
MIMAT0011585 | crm-miR-86-5p | 8 | _......_ | 3 | 75 |
MIMAT0011407 | sme-miR-2147d-3p | 2 | _......_ | 7 | 75 |
MIMAT0011356 | sbi-miR395l | 6 | ......__ | 1 | 75 |
MIMAT0011355 | sbi-miR395k | 6 | ......__ | 1 | 75 |
MIMAT0011354 | sbi-miR395j | 6 | ......__ | 1 | 75 |
MIMAT0011353 | sbi-miR395i | 6 | ......__ | 1 | 75 |
MIMAT0011352 | sbi-miR395h | 6 | ......__ | 1 | 75 |
MIMAT0011351 | sbi-miR395g | 6 | ......__ | 1 | 75 |
MIMAT0011350 | sbi-miR395c | 6 | ......__ | 1 | 75 |
MIMAT0011312 | dre-miR-2192 | 8 | _......_ | 3 | 75 |
MIMAT0011269 | sme-miR-2170 | 8 | _......_ | 3 | 75 |
MIMAT0010130 | ebv-miR-BART21-5p | 1 | __...... | 6 | 75 |
MIMAT0009982 | bfl-miR-2056 | 2 | _......_ | 7 | 75 |
MIMAT0009313 | bta-miR-412 | 2 | ......__ | 7 | 75 |
MIMAT0019109 | tca-miR-71-3p | 3 | __...... | 8 | 75 |
MIMAT0008139 | ptr-miR-412 | 2 | ......__ | 7 | 75 |
MIMAT0008114 | ptr-miR-34c | 3 | __...... | 8 | 75 |
MIMAT0007908 | sly-miR1916 | 3 | _......_ | 8 | 75 |
MIMAT0007906 | bmo-miR-317-3p | 6 | _......_ | 1 | 75 |
MIMAT0026905 | mml-miR-653-3p | 1 | _......_ | 6 | 75 |
MIMAT0006318 | mml-miR-412-3p | 2 | ......__ | 7 | 75 |
MIMAT0006176 | mml-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0007687 | gga-miR-1776 | 8 | __...... | 3 | 75 |
MIMAT0007109 | oan-miR-34a-3p | 3 | __...... | 8 | 75 |
MIMAT0005908 | hsa-miR-1257 | 6 | _......_ | 1 | 75 |
MIMAT0005536 | mcmv-miR-m01-3-5p | 8 | ......__ | 3 | 75 |
MIMAT0005356 | tae-miR1121 | 8 | __...... | 3 | 75 |
MIMAT0012545 | mdv2-miR-M29-3p | 8 | __...... | 3 | 75 |
MIMAT0004476 | mdv2-miR-M29-5p | 2 | ......__ | 7 | 75 |
MIMAT0004971 | hsa-miR-921 | 7 | __...... | 2 | 75 |
MIMAT0017284 | mmu-miR-653-3p | 1 | _......_ | 6 | 75 |
MIMAT0004286 | cbr-miR-785a | 8 | _......_ | 3 | 75 |
MIMAT0004220 | cel-miR-785-3p | 8 | _......_ | 3 | 75 |
MIMAT0003878 | osa-miR395r | 6 | ......__ | 1 | 75 |
MIMAT0003877 | osa-miR395w | 6 | ......__ | 1 | 75 |
MIMAT0003876 | osa-miR395v | 6 | ......__ | 1 | 75 |
MIMAT0003874 | osa-miR395q | 6 | ......__ | 1 | 75 |
MIMAT0003873 | osa-miR395p | 6 | ......__ | 1 | 75 |
MIMAT0003871 | osa-miR395n | 6 | ......__ | 1 | 75 |
MIMAT0003870 | osa-miR395m | 6 | ......__ | 1 | 75 |
MIMAT0032011 | dre-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0026625 | hsa-miR-653-3p | 1 | _......_ | 6 | 75 |
MIMAT0003124 | rno-miR-412-3p | 1 | ......__ | 6 | 75 |
MIMAT0002170 | hsa-miR-412-3p | 2 | ......__ | 7 | 75 |
MIMAT0001701 | zma-miR395a-3p | 6 | ......__ | 1 | 75 |
MIMAT0001700 | zma-miR395c-3p | 6 | ......__ | 1 | 75 |
MIMAT0001698 | zma-miR395b-3p | 6 | ......__ | 1 | 75 |
MIMAT0001433 | sbi-miR395e | 6 | ......__ | 1 | 75 |
MIMAT0001432 | sbi-miR395d | 6 | ......__ | 1 | 75 |
MIMAT0001430 | sbi-miR395a | 6 | ......__ | 1 | 75 |
MIMAT0001429 | sbi-miR395b | 6 | ......__ | 1 | 75 |
MIMAT0026541 | gga-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0026540 | gga-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0026505 | gga-miR-138-1-3p | 3 | ......__ | 8 | 75 |
MIMAT0000975 | osa-miR395u | 6 | ......__ | 1 | 75 |
MIMAT0000973 | osa-miR395a | 6 | ......__ | 1 | 75 |
MIMAT0000972 | osa-miR395c | 6 | ......__ | 1 | 75 |
MIMAT0000969 | osa-miR395t | 6 | ......__ | 1 | 75 |
MIMAT0000968 | osa-miR395s | 6 | ......__ | 1 | 75 |
MIMAT0000967 | osa-miR395l | 6 | ......__ | 1 | 75 |
MIMAT0000966 | osa-miR395k | 6 | ......__ | 1 | 75 |
MIMAT0000965 | osa-miR395j | 6 | ......__ | 1 | 75 |
MIMAT0000964 | osa-miR395i | 6 | ......__ | 1 | 75 |
MIMAT0000963 | osa-miR395h | 6 | ......__ | 1 | 75 |
MIMAT0000962 | osa-miR395g | 6 | ......__ | 1 | 75 |
MIMAT0000961 | osa-miR395e | 6 | ......__ | 1 | 75 |
MIMAT0000960 | osa-miR395d | 6 | ......__ | 1 | 75 |
MIMAT0000959 | osa-miR395b | 6 | ......__ | 1 | 75 |
MIMAT0004723 | rno-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0017105 | rno-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0004677 | hsa-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0000491 | cbr-miR-86 | 8 | _......_ | 3 | 75 |
MIMAT0004581 | mmu-miR-34b-3p | 3 | __...... | 8 | 75 |
MIMAT0004580 | mmu-miR-34c-3p | 3 | __...... | 8 | 75 |
MIMAT0000059 | cel-miR-86-5p | 8 | _......_ | 3 | 75 |
MIMAT0015107 | cel-miR-71-3p | 3 | __...... | 8 | 75 |