Result for your query miRNA sequence
>hsv1-miR-470
cuugccug

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cttgcctg8
MIMAT0019563pma-miR-1788b-3p8........1100
MIMAT0008402hsv1-miR-H4-3p1........8100
MIMAT0033346str-miR-72-5p7......._187
MIMAT0032863ppc-miR-8216-3p7......._187
MIMAT0032789cel-miR-8188-5p7......._187
MIMAT0032788cel-miR-8187-3p7......._187
MIMAT0030478prd-miR-72-5p7......._187
MIMAT0032197lva-miR-31-5p7......._187
MIMAT0032147pmi-miR-31-5p7......._187
MIMAT0029889mmu-miR-216c-3p2_.......887
MIMAT0029717cbn-miR-72b7......._187
MIMAT0027716mmu-miR-6908-5p1_.......787
MIMAT0027689hsa-miR-6894-3p1_.......787
MIMAT0025360ssc-miR-317......._187
MIMAT0024043ptr-miR-47428_.......287
MIMAT0023902cgr-miR-31-5p7......._187
MIMAT0023602sly-miR482b2......._887
MIMAT0023600stu-miR482d-3p2......._887
MIMAT0023498hco-miR-727......._187
MIMAT0023277osa-miR58068_.......287
MIMAT0022064aca-miR-54428_.......287
MIMAT0021930aca-miR-31-5p7......._187
MIMAT0021468asu-miR-72-5p7......._187
MIMAT0019872hsa-miR-4742-5p8_.......287
MIMAT0018814tca-miR-3865-5p7......._187
MIMAT0014615tgu-miR-317......._187
MIMAT0014340ghr-miR482b2......._887
MIMAT0014107bma-miR-727......._187
MIMAT0013115eca-miR-317......._187
MIMAT0012659dpu-miR-317......._187
MIMAT0011661ppc-miR-727......._187
MIMAT0011567crm-miR-72-5p7......._187
MIMAT0009657spu-miR-317......._187
MIMAT0009614sko-miR-317......._187
MIMAT0009566lgi-miR-317......._187
MIMAT0009515cte-miR-317......._187
MIMAT0008362tca-miR-31-5p7......._187
MIMAT0006599cfa-miR-317......._187
MIMAT0006079odi-miR-317......._187
MIMAT0007111oan-miR-31-5p7......._187
MIMAT0003980sme-miR-31b-5p7......._187
MIMAT0003979sme-miR-31a-5p7......._187
MIMAT0003679xtr-miR-31a7......._187
MIMAT0003548bta-miR-317......._187
MIMAT0006785ptc-miR482a.22......._887
MIMAT0001189gga-miR-31-5p7......._187
MIMAT0000810rno-miR-31a-5p7......._187
MIMAT0000538mmu-miR-31-5p7......._187
MIMAT0000322cel-miR-2667......._187
MIMAT0000089hsa-miR-31-5p7......._187
MIMAT0000044cel-miR-72-5p7......._187
MIMAT0027686hsa-miR-6893-5p8.c......187
MIMAT0027516hsa-miR-6808-5p8.c......187
MIMAT0022994gma-miR169l-3p8......c.187
MIMAT0018003hsa-miR-3622a-5p8.g......187
MIMAT0037209ata-miR169a-3p8......__375
MIMAT0037207ata-miR169d-3p6......__175
MIMAT0037200ata-miR160c-5p1__......675
MIMAT0037179ata-miR169f-3p6......__175
MIMAT0037156ata-miR160a-5p1__......675
MIMAT0037147ata-miR169b-3p8......__375
MIMAT0037143ata-miR169j-3p8......__375
MIMAT0037102ata-miR160b-5p1__......675
MIMAT0037065ssc-miR-9846-3p1__......675
MIMAT0036897oha-miR-31-5p8_......_375
MIMAT0036754oha-miR-1788-3p6__......175
MIMAT0036058chi-miR-214-5p1__......675
MIMAT0035932chi-miR-1271-3p3__......875
MIMAT0035511bdi-miR160f1__......675
MIMAT0035476sly-miR169e-3p7......__275
MIMAT0035402nve-miR-94416......__175
MIMAT0035314gsa-miR-31-5p7......__275
MIMAT0034802efu-miR-92113__......875
MIMAT0034768efu-miR-9188a1__......675
MIMAT0034445eca-miR-89171......__675
MIMAT0034279cfa-miR-87898__......375
MIMAT0033912atr-miR1601__......675
MIMAT0033241ppc-miR-8286b-3p7......__275
MIMAT0033231ppc-miR-8343-5p7......__275
MIMAT0033078ppc-miR-8286a-3p7......__275
MIMAT0032871ppc-miR-8219-3p7......__275
MIMAT0032645ssa-miR-456-5p7__......275
MIMAT0032554ssa-miR-24a-4-5p1__......675
MIMAT0032514ssa-miR-214-5p1__......675
MIMAT0032413ssa-miR-1788-3p6__......175
MIMAT0031789cpa-miR160f-5p1__......675
MIMAT0031788cpa-miR160e1__......675
MIMAT0031787cpa-miR160d1__......675
MIMAT0031785cpa-miR160c-5p1__......675
MIMAT0031784cpa-miR160b1__......675
MIMAT0031783cpa-miR160a1__......675
MIMAT0031680bbe-miR-4860-5p1__......675
MIMAT0031666bbe-miR-31-5p7......__275
MIMAT0031439ppe-miR160b1__......675
MIMAT0031438ppe-miR160a1__......675
MIMAT0031285stu-miR160b1__......675
MIMAT0031283stu-miR160a-5p1__......675
MIMAT0030815prd-miR-7960-3p8......__375
MIMAT0030302bdi-miR7776-5p.11......__675
MIMAT0030002mtr-miR169l-3p6......__175
MIMAT0029876mmu-miR-6715-5p7__......275
MIMAT0029720cbn-miR-74d7......__275
MIMAT0029719cbn-miR-73b7......__275
MIMAT0029718cbn-miR-74a7......__275
MIMAT0029716cbn-miR-74b7......__275
MIMAT0029715cbn-miR-73a7......__275
MIMAT0029714cbn-miR-72a7......__275
MIMAT0029713cbn-miR-74c7......__275
MIMAT0029640crm-miR-22257......__275
MIMAT0029501ipu-miR-317......__275
MIMAT0029186mes-miR160h1__......675
MIMAT0029185mes-miR160g1__......675
MIMAT0029184mes-miR160f1__......675
MIMAT0029183mes-miR160e1__......675
MIMAT0029182mes-miR160d1__......675
MIMAT0029181mes-miR160c1__......675
MIMAT0029180mes-miR160b1__......675
MIMAT0029179mes-miR160a1__......675
MIMAT0028375mml-miR-1911-3p8__......375
MIMAT0026180cme-miR160c1__......675
MIMAT0026178cme-miR160d1__......675
MIMAT0026171cme-miR160b1__......675
MIMAT0026072cme-miR160a1__......675
MIMAT0025904mdm-miR160e1__......675
MIMAT0025903mdm-miR160d1__......675
MIMAT0025902mdm-miR160c1__......675
MIMAT0025901mdm-miR160b1__......675
MIMAT0025900mdm-miR160a1__......675
MIMAT0028090mmu-miR-7092-5p8_......_375
MIMAT0027886mmu-miR-6992-5p1__......675
MIMAT0027778mmu-miR-6939-5p6__......175
MIMAT0027518hsa-miR-6809-5p7......__275
MIMAT0025842hsa-miR-6715b-5p7__......275
MIMAT0025766gga-miR-6665-5p1__......675
MIMAT0025588mmu-miR-65418__......375
MIMAT0025499htu-miR160a1__......675
MIMAT0025485hsa-miR-6514-3p2__......775
MIMAT0025478hsa-miR-6511a-5p6__......175
MIMAT0025055rno-miR-63182__......775
MIMAT0025038sma-miR-31-5p7......__275
MIMAT0024888gma-miR160f1__......675
MIMAT0027318ppe-miR482e1_......_675
MIMAT0024643nta-miR160d1__......675
MIMAT0024642nta-miR160c1__......675
MIMAT0024641nta-miR160b1__......675
MIMAT0024640nta-miR160a1__......675
MIMAT0027239pgi-miR482b2......__775
MIMAT0027238pgi-miR482a2......__775
MIMAT0027225lus-miR160j1__......675
MIMAT0027222lus-miR160i1__......675
MIMAT0027211lus-miR160h1__......675
MIMAT0027202lus-miR160g1__......675
MIMAT0027195lus-miR160f1__......675
MIMAT0027189lus-miR160e1__......675
MIMAT0027171lus-miR160d1__......675
MIMAT0027151lus-miR160c1__......675
MIMAT0027150lus-miR160b1__......675
MIMAT0027137lus-miR160a1__......675
MIMAT0024514cca-miR160b1__......675
MIMAT0024513cca-miR160a1__......675
MIMAT0027108mml-miR-1271-3p2__......775
MIMAT0023851cgr-miR-214-5p1__......675
MIMAT0023747cgr-miR-12712__......775
MIMAT0023620bna-miR160d1__......675
MIMAT0023619bna-miR160c1__......675
MIMAT0023618bna-miR160b1__......675
MIMAT0023617bna-miR160a1__......675
MIMAT0023605nta-miR482b-3p2......__775
MIMAT0023603sly-miR482c2......__775
MIMAT0023601stu-miR482e-3p2......__775
MIMAT0023528dpr-miR1601__......675
MIMAT0022755vun-miR1601__......675
MIMAT0022670ola-miR-17886__......175
MIMAT0022649ola-miR-317......__275
MIMAT0023028tur-miR-5727-5p7_......_275
MIMAT0022205mtr-miR2592bl-5p7......__275
MIMAT0022097aca-miR-5464-3p2_......_775
MIMAT0021871aca-miR-214-5p1__......675
MIMAT0021806aca-miR-1788-3p6__......175
MIMAT0020682bdi-miR160e-5p1__......675
MIMAT0020681bdi-miR160d-5p1__......675
MIMAT0020675bdi-miR160c-5p1__......675
MIMAT0027052bdi-miR169k-3p7......__275
MIMAT0020668bdi-miR160b-5p1__......675
MIMAT0020661bdi-miR160a-5p1__......675
MIMAT0020635mmu-miR-51253__......875
MIMAT0020572bdi-miR50657_......_275
MIMAT0020973gma-miR160e1__......675
MIMAT0020972gma-miR160d1__......675
MIMAT0020971gma-miR160c1__......675
MIMAT0020970gma-miR160b1__......675
MIMAT0020088bfl-miR-4860-5p1__......675
MIMAT0020378tcc-miR160c1__......675
MIMAT0020377tcc-miR160b1__......675
MIMAT0020376tcc-miR160a1__......675
MIMAT0019933hsa-miR-4776-3p1......__675
MIMAT0019930hsa-miR-4774-3p2_......_775
MIMAT0019783hsa-miR-46927__......275
MIMAT0019755hsa-miR-46738__......375
MIMAT0019705hsa-miR-4645-5p8__......375
MIMAT0019687osa-miR3982-3p3_......_875
MIMAT0019562pma-miR-1788a-3p6__......175
MIMAT0019516pma-miR-204-3p6......__175
MIMAT0019432pma-miR-317......__275
MIMAT0019051hsa-miR-45147__......275
MIMAT0019232hsa-miR-4423-5p3_......_875
MIMAT0018481csi-miR482b2......__775
MIMAT0018434nlo-miR-31a6......__175
MIMAT0018387ngi-miR-31a6......__175
MIMAT0018363far-miR1601__......675
MIMAT0018219tae-miR1697......__275
MIMAT0018212ttu-miR1601__......675
MIMAT0018696tca-miR-3833-5p7......__275
MIMAT0018666tca-miR-3820-5p1......__675
MIMAT0018147pab-miR160b1__......675
MIMAT0018146pab-miR160a1__......675
MIMAT0017967ssc-miR-12711__......675
MIMAT0016897hsa-miR-42697__......275
MIMAT0016707cin-miR-4116-5p8......__375
MIMAT0017807rno-miR-35493......__875
MIMAT0016322ahy-miR160-5p1__......675
MIMAT0016287sja-miR-3483-3p2__......775
MIMAT0016255sja-miR-31-5p7......__275
MIMAT0015661nvi-miR-31a6......__175
MIMAT0017671aly-miR399h-5p7......__275
MIMAT0017581aly-miR399f-5p7......__275
MIMAT0017490aly-miR169c-3p6......__175
MIMAT0017488aly-miR169b-3p6......__175
MIMAT0017486aly-miR169a-3p6......__175
MIMAT0017439aly-miR160c-5p1__......675
MIMAT0017437aly-miR160b-5p1__......675
MIMAT0017435aly-miR160a-5p1__......675
MIMAT0015577bmo-miR-3383-5p2__......775
MIMAT0015503bmo-miR-33153......__875
MIMAT0015497bmo-miR-3308-3p8_......_375
MIMAT0019207hsa-miR-3152-5p2_......_775
MIMAT0014978hsa-miR-31161__......675
MIMAT0027021tgu-miR-214-5p1__......675
MIMAT0026964tgu-miR-456-5p7__......275
MIMAT0014425cqu-miR-31-5p7......__275
MIMAT0014276aae-miR-317......__275
MIMAT0014206rco-miR160c1__......675
MIMAT0014154rco-miR160b1__......675
MIMAT0014153rco-miR160a1__......675
MIMAT0015329zma-miR169r-3p6......__175
MIMAT0015327zma-miR169p-3p6......__175
MIMAT0013981zma-miR160g-5p1__......675
MIMAT0013044eca-miR-6322__......775
MIMAT0012814ptr-miR-6611__......675
MIMAT0012591aqc-miR482c2......__775
MIMAT0012590aqc-miR482b2......__775
MIMAT0012589aqc-miR482a2......__775
MIMAT0012554aqc-miR160b1__......675
MIMAT0012553aqc-miR160a1__......675
MIMAT0013517hsa-miR-2682-5p6__......175
MIMAT0012370dps-miR-2507b-5p7_......_275
MIMAT0011685ppc-miR-22597......__275
MIMAT0011524crm-miR-737......__275
MIMAT0011523crm-miR-74b7......__275
MIMAT0011522crm-miR-74a7......__275
MIMAT0011502cbr-miR-74b-3p7......__275
MIMAT0011498cbr-miR-2225-3p7......__275
MIMAT0011464cbr-miR-73b7......__275
MIMAT0011324sbi-miR160f1__......675
MIMAT0011295dre-miR-1788-3p6__......175
MIMAT0010154bra-miR160a-5p1__......675
MIMAT0010068osa-miR2102-5p7......__275
MIMAT0019168bfl-miR-2059-5p8_......_375
MIMAT0009473bfl-miR-31-5p7......__275
MIMAT0009104dya-miR-31b7......__275
MIMAT0009103dya-miR-31a7......__275
MIMAT0009044dwi-miR-31a7......__275
MIMAT0009037dwi-miR-31b7......__275
MIMAT0008972dvi-miR-31b7......__275
MIMAT0008967dvi-miR-31a-5p7......__275
MIMAT0008886dsi-miR-31a7......__275
MIMAT0008878dsi-miR-31b7......__275
MIMAT0008825dse-miR-31a7......__275
MIMAT0008823dse-miR-31b7......__275
MIMAT0008752dpe-miR-31b7......__275
MIMAT0008723dpe-miR-31a7......__275
MIMAT0008677dmo-miR-31a7......__275
MIMAT0008639dmo-miR-31b7......__275
MIMAT0008612dgr-miR-31b7......__275
MIMAT0008585dgr-miR-31a7......__275
MIMAT0008519der-miR-31a7......__275
MIMAT0008481der-miR-31b7......__275
MIMAT0008477dan-miR-31a7......__275
MIMAT0008469dan-miR-31b7......__275
MIMAT0008230ptr-miR-5503__......875
MIMAT0007914sly-miR160a1__......675
MIMAT0007891hsa-miR-1915-5p3......__875
MIMAT0006500mml-miR-6611__......675
MIMAT0006418mml-miR-550-5p3__......875
MIMAT0007701gga-miR-1788-3p6__......175
MIMAT0007491gga-miR-16237__......275
MIMAT0006121csa-miR-317......__275
MIMAT0006092cin-miR-317......__275
MIMAT0006020odi-miR-14697......__275
MIMAT0005967osa-miR169r-3p7......__275
MIMAT0015244osa-miR1423-5p6_......_175
MIMAT0007170oan-miR-214-5p1__......675
MIMAT0005656vvi-miR160e1__......675
MIMAT0005654vvi-miR160d1__......675
MIMAT0005653vvi-miR160c1__......675
MIMAT0005652vvi-miR160b1__......675
MIMAT0005651vvi-miR160a1__......675
MIMAT0005562xtr-miR-31b6......__175
MIMAT0005380cre-miR1144a.16__......175
MIMAT0005345tae-miR1601__......675
MIMAT0005219smo-miR160b1__......675
MIMAT0005218smo-miR160a1__......675
MIMAT0005036ppt-miR160g1__......675
MIMAT0005035ppt-miR160f1__......675
MIMAT0005034ppt-miR160e1__......675
MIMAT0004428ame-miR-31a6......__175
MIMAT0004347ppt-miR160a1__......675
MIMAT0011115mtr-miR160e1__......675
MIMAT0011101mtr-miR160d1__......675
MIMAT0011062mtr-miR160c1__......675
MIMAT0011060mtr-miR160b1__......675
MIMAT0004213bmo-miR-31-5p6......__175
MIMAT0026679mdo-miR-214-5p1__......675
MIMAT0004094mdo-miR-31-5p8_......_375
MIMAT0026645gga-miR-456-5p6__......175
MIMAT0003579xtr-miR-34b6__......175
MIMAT0022712hsa-miR-1271-3p3__......875
MIMAT0020925hsa-miR-550a-3-5p3__......875
MIMAT0003347dre-miR-316......__175
MIMAT0003324hsa-miR-6611__......675
MIMAT0004800hsa-miR-550a-5p3__......875
MIMAT0026588mml-miR-214-5p1__......675
MIMAT0002384ppa-miR-316......__175
MIMAT0002383mne-miR-316......__175
MIMAT0002382ppy-miR-316......__175
MIMAT0002381ggo-miR-316......__175
MIMAT0002380ptr-miR-316......__175
MIMAT0002379mml-miR-31-5p6......__175
MIMAT0001914ptc-miR160h1__......675
MIMAT0001913ptc-miR160g1__......675
MIMAT0001912ptc-miR160f1__......675
MIMAT0001911ptc-miR160e-5p1__......675
MIMAT0001910ptc-miR160d1__......675
MIMAT0001909ptc-miR160c-5p1__......675
MIMAT0001908ptc-miR160b-5p1__......675
MIMAT0001907ptc-miR160a1__......675
MIMAT0001750zma-miR160f-5p1__......675
MIMAT0015193zma-miR169c-3p6......__175
MIMAT0001676gma-miR160a-5p1__......675
MIMAT0001641mtr-miR160a1__......675
MIMAT0017189mghv-miR-M1-5-3p6_......_175
MIMAT0001405sbi-miR160e1__......675
MIMAT0001404sbi-miR160b1__......675
MIMAT0001403sbi-miR160c1__......675
MIMAT0001402sbi-miR160a1__......675
MIMAT0001401sbi-miR160d1__......675
MIMAT0001374zma-miR160e1__......675
MIMAT0015141zma-miR169b-3p6......__175
MIMAT0015140zma-miR169a-3p6......__175
MIMAT0001363zma-miR160b-5p1__......675
MIMAT0001362zma-miR160d-5p1__......675
MIMAT0001361zma-miR160c-5p1__......675
MIMAT0001360zma-miR160a-5p1__......675
MIMAT0001221dps-miR-31b7......__275
MIMAT0001220dps-miR-31a7......__275
MIMAT0001179gga-miR-34b-5p6__......175
MIMAT0001031osa-miR160f-5p1__......675
MIMAT0001030osa-miR160e-5p1__......675
MIMAT0031897ath-miR169b-3p6......__175
MIMAT0017157rno-miR-211-3p6......__175
MIMAT0004664mmu-miR-214-5p1__......675
MIMAT0000631osa-miR160d-5p1__......675
MIMAT0000630osa-miR160c-5p1__......675
MIMAT0000629osa-miR160b-5p1__......675
MIMAT0000628osa-miR160a-5p1__......675
MIMAT0000509cbr-miR-2686......__175
MIMAT0000483cbr-miR-74a7......__275
MIMAT0000482cbr-miR-73a7......__275
MIMAT0000400dme-miR-31a-5p7......__275
MIMAT0000389dme-miR-31b-5p7......__275
MIMAT0000325cel-miR-2696......__175
MIMAT0000324cel-miR-2686......__175
MIMAT0004564hsa-miR-214-5p1__......675
MIMAT0031886ath-miR169a-3p6......__175
MIMAT0000180ath-miR160c-5p1__......675
MIMAT0000179ath-miR160b1__......675
MIMAT0000178ath-miR160a-5p1__......675
MIMAT0000046cel-miR-74-3p7......__275
MIMAT0000045cel-miR-73-3p7......__275