VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>rlcv-miR-rl1-25-3p
gacaauu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`gacaatt`	7
MIMAT0030424	hsa-miR-7849-3p	1	`.......`	7	100
MIMAT0024803	hvu-miR5049c	2	`.......`	8	100
MIMAT0023472	hco-miR-5965	1	`.......`	7	100
MIMAT0016949	rlcv-miR-rL1-25-3p	2	`.......`	8	100
MIMAT0020354	cel-miR-800-5p	2	`.......`	8	100
MIMAT0037083	ssc-miR-219b-3p	8	`_......`	3	85
MIMAT0036841	oha-miR-219-5p	8	`......_`	3	85
MIMAT0036551	tch-miR-219-5p	8	`......_`	3	85
MIMAT0036384	gma-miR9753	1	`_......`	6	85
MIMAT0036067	chi-miR-219	8	`......_`	3	85
MIMAT0035548	dvi-miR-1000-5p	8	`......_`	3	85
MIMAT0035264	gsa-miR-219-5p	8	`......_`	3	85
MIMAT0035056	efu-miR-219	8	`......_`	3	85
MIMAT0034667	eca-miR-9118	3	`_......`	8	85
MIMAT0034144	gra-miR8771b	8	`......_`	3	85
MIMAT0034143	gra-miR8771a	8	`......_`	3	85
MIMAT0033605	sma-miR-8447-3p	1	`......_`	6	85
MIMAT0033504	sma-miR-219-5p	8	`......_`	3	85
MIMAT0032752	ssa-miR-7552a-5p	3	`_......`	8	85
MIMAT0032750	ssa-miR-7552b-5p	3	`_......`	8	85
MIMAT0032530	ssa-miR-219c-5p	8	`......_`	3	85
MIMAT0032529	ssa-miR-219b-3p	8	`_......`	3	85
MIMAT0032528	ssa-miR-219b-5p	8	`......_`	3	85
MIMAT0032527	ssa-miR-219a-3p	8	`_......`	3	85
MIMAT0032526	ssa-miR-219a-5p	8	`......_`	3	85
MIMAT0031650	bbe-miR-219-5p	8	`......_`	3	85
MIMAT0029975	mtr-miR2664b	6	`_......`	1	85
MIMAT0032215	lva-miR-219-5p	8	`......_`	3	85
MIMAT0032168	pmi-miR-219-5p	8	`......_`	3	85
MIMAT0029474	ipu-miR-219a	8	`_......`	3	85
MIMAT0029021	oan-miR-216b-3p	1	`_......`	6	85
MIMAT0028978	oan-miR-7415-5p	7	`_......`	2	85
MIMAT0028173	dev-miR-D4-3p	8	`_......`	3	85
MIMAT0027433	hsa-miR-6766-3p	8	`......_`	3	85
MIMAT0025446	pol-miR-219-5p	8	`......_`	3	85
MIMAT0024933	hme-miR-1000	8	`......_`	3	85
MIMAT0024813	hvu-miR5049d	2	`_......`	7	85
MIMAT0024732	nta-miR6025d	2	`_......`	7	85
MIMAT0024441	mse-miR-1000	8	`......_`	3	85
MIMAT0023682	ame-miR-6058	3	`......_`	8	85
MIMAT0023248	gma-miR5674b	7	`_......`	2	85
MIMAT0022768	sko-miR-219	8	`......_`	3	85
MIMAT0022494	hsa-miR-5701	8	`......_`	3	85
MIMAT0022459	gma-miR5674a	7	`_......`	2	85
MIMAT0021884	aca-miR-219-5p	8	`......_`	3	85
MIMAT0021403	rmi-miR-5330	7	`_......`	2	85
MIMAT0020271	emu-miR-219	8	`......_`	3	85
MIMAT0020246	egr-miR-219	8	`......_`	3	85
MIMAT0020122	xbo-miR-219	8	`......_`	3	85
MIMAT0019945	hsa-miR-4782-3p	8	`......_`	3	85
MIMAT0019708	hsa-miR-4646-3p	6	`......_`	1	85
MIMAT0018426	nlo-miR-219	8	`......_`	3	85
MIMAT0018391	ngi-miR-219	8	`......_`	3	85
MIMAT0032111	gma-miR1520f-5p	6	`......_`	1	85
MIMAT0018652	tca-miR-3814-5p	2	`_......`	7	85
MIMAT0017950	hsa-miR-2355-3p	6	`......_`	1	85
MIMAT0016658	cin-miR-4084-3p	3	`_......`	8	85
MIMAT0016563	cin-miR-4037-5p	1	`_......`	6	85
MIMAT0016267	sja-miR-219-5p	8	`......_`	3	85
MIMAT0015804	ppy-miR-219-5p	8	`......_`	3	85
MIMAT0015690	nvi-miR-219	8	`......_`	3	85
MIMAT0017684	aly-miR773b-3p	6	`_......`	1	85
MIMAT0014717	api-miR-219	8	`......_`	3	85
MIMAT0014711	api-miR-1000	8	`......_`	3	85
MIMAT0027018	tgu-miR-216b-3p	1	`_......`	6	85
MIMAT0014568	tgu-miR-219a	8	`......_`	3	85
MIMAT0014403	cqu-miR-1000	8	`......_`	3	85
MIMAT0014326	bmo-miR-1000	8	`......_`	3	85
MIMAT0014307	aae-miR-219	8	`......_`	3	85
MIMAT0014297	aae-miR-1000	8	`......_`	3	85
MIMAT0013232	eca-miR-508-3p	8	`......_`	3	85
MIMAT0013099	eca-miR-219-5p	8	`......_`	3	85
MIMAT0012690	isc-miR-219	8	`......_`	3	85
MIMAT0012645	dpu-miR-219	8	`......_`	3	85
MIMAT0013471	mtr-miR2664a	6	`_......`	1	85
MIMAT0013311	mtr-miR2606b	2	`_......`	7	85
MIMAT0013310	mtr-miR2606a	2	`_......`	7	85
MIMAT0012457	dsi-miR-1000-5p	8	`......_`	3	85
MIMAT0012373	dps-miR-2555-3p	8	`......_`	3	85
MIMAT0012265	dps-miR-1000-5p	8	`......_`	3	85
MIMAT0011892	bta-miR-2355-3p	6	`......_`	1	85
MIMAT0011673	ppc-miR-2244	3	`_......`	8	85
MIMAT0011462	cel-miR-2220-3p	8	`_......`	3	85
MIMAT0010119	ame-miR-1000	8	`......_`	3	85
MIMAT0010109	aga-miR-1000	8	`......_`	3	85
MIMAT0010097	tca-miR-1000-5p	8	`......_`	3	85
MIMAT0010012	bfl-miR-219	8	`......_`	3	85
MIMAT0009685	spu-miR-219-5p	8	`......_`	3	85
MIMAT0009556	cte-miR-219	8	`......_`	3	85
MIMAT0012547	bta-miR-219-3p	8	`_......`	3	85
MIMAT0009269	bta-miR-219-5p	8	`......_`	3	85
MIMAT0009107	dya-miR-219	8	`......_`	3	85
MIMAT0009012	dwi-miR-219	8	`......_`	3	85
MIMAT0008978	dvi-miR-219-5p	8	`......_`	3	85
MIMAT0008868	dsi-miR-219	8	`......_`	3	85
MIMAT0008824	dse-miR-219	8	`......_`	3	85
MIMAT0008719	dpe-miR-219	8	`......_`	3	85
MIMAT0008638	dmo-miR-219	8	`......_`	3	85
MIMAT0008561	dgr-miR-219	8	`......_`	3	85
MIMAT0008552	der-miR-219	8	`......_`	3	85
MIMAT0008474	dan-miR-219	8	`......_`	3	85
MIMAT0008377	tca-miR-219-5p	8	`......_`	3	85
MIMAT0009194	ptr-miR-219-2-3p	8	`_......`	3	85
MIMAT0009193	ptr-miR-219-5p	8	`......_`	3	85
MIMAT0006729	cfa-miR-219-3p	8	`_......`	3	85
MIMAT0006611	cfa-miR-219-5p	8	`......_`	3	85
MIMAT0006246	mml-miR-219-3p	8	`_......`	3	85
MIMAT0006245	mml-miR-219-5p	8	`......_`	3	85
MIMAT0006137	csa-miR-219	8	`......_`	3	85
MIMAT0006113	cin-miR-219-5p	8	`......_`	3	85
MIMAT0006084	odi-miR-219	8	`......_`	3	85
MIMAT0007286	gga-miR-1416-3p	1	`_......`	6	85
MIMAT0007286	gga-miR-1416-3p	8	`_......`	3	85
MIMAT0006900	oan-miR-219-3p	8	`_......`	3	85
MIMAT0006899	oan-miR-219-5p	8	`......_`	3	85
MIMAT0005781	pbi-miR-508	8	`......_`	3	85
MIMAT0005764	mml-miR-508-3p	8	`......_`	3	85
MIMAT0005742	age-miR-508	8	`......_`	3	85
MIMAT0005520	dme-miR-1000-5p	8	`......_`	3	85
MIMAT0026681	mdo-miR-219-1-3p	8	`_......`	3	85
MIMAT0004134	mdo-miR-219-5p	8	`......_`	3	85
MIMAT0004006	sme-miR-219-5p	8	`......_`	3	85
MIMAT0003632	xtr-miR-219	8	`......_`	3	85
MIMAT0002901	tni-miR-219	8	`......_`	3	85
MIMAT0002900	fru-miR-219	8	`......_`	3	85
MIMAT0002577	ppy-miR-219	8	`......_`	3	85
MIMAT0002576	ggo-miR-219	8	`......_`	3	85
MIMAT0002575	mml-miR-219	8	`......_`	3	85
MIMAT0001506	aga-miR-219	8	`......_`	3	85
MIMAT0001478	ame-miR-219	8	`......_`	3	85
MIMAT0001286	dre-miR-219-5p	8	`......_`	3	85
MIMAT0001234	dps-miR-219	8	`......_`	3	85
MIMAT0001170	gga-miR-219a	8	`......_`	3	85
MIMAT0005446	rno-miR-219a-2-3p	8	`_......`	3	85
MIMAT0000889	rno-miR-219a-5p	8	`......_`	3	85
MIMAT0022841	mmu-miR-219a-2-3p	8	`_......`	3	85
MIMAT0004675	hsa-miR-219a-2-3p	8	`_......`	3	85
MIMAT0000664	mmu-miR-219a-5p	8	`......_`	3	85
MIMAT0000335	dme-miR-219-5p	8	`......_`	3	85
MIMAT0020335	cel-miR-241-3p	6	`......_`	1	85
MIMAT0000276	hsa-miR-219a-5p	8	`......_`	3	85