RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gagagcag | 8 | ||
MIMAT0021550 | asu-miR-5349-5p | 8 | ........ | 1 | 100 |
MIMAT0011778 | hsa-miR-2278 | 1 | ........ | 8 | 100 |
MIMAT0034599 | eca-miR-9055 | 2 | ......._ | 8 | 87 |
MIMAT0033271 | ppc-miR-8364s-3p | 2 | ......._ | 8 | 87 |
MIMAT0033265 | ppc-miR-8364l-3p | 2 | ......._ | 8 | 87 |
MIMAT0033263 | ppc-miR-8364r-3p | 1 | ......._ | 7 | 87 |
MIMAT0028073 | mmu-miR-7083-3p | 8 | _....... | 2 | 87 |
MIMAT0028031 | mmu-miR-7063-3p | 7 | ......._ | 1 | 87 |
MIMAT0027909 | mmu-miR-6973b-3p | 7 | ......._ | 1 | 87 |
MIMAT0025181 | ptc-miR6421-3p | 2 | _....... | 8 | 87 |
MIMAT0019390 | pma-miR-18b-3p | 8 | _....... | 2 | 87 |
MIMAT0018995 | hsa-miR-4468 | 1 | _....... | 7 | 87 |
MIMAT0014230 | aae-miR-306-3p | 1 | ......._ | 7 | 87 |
MIMAT0012333 | dps-miR-2522b-3p | 1 | _....... | 7 | 87 |
MIMAT0012017 | bta-miR-2442 | 1 | _....... | 7 | 87 |
MIMAT0011952 | bta-miR-2397-3p | 2 | _....... | 8 | 87 |
MIMAT0015175 | zma-miR156j-3p | 7 | ......._ | 1 | 87 |
MIMAT0027940 | mmu-miR-7018-5p | 1 | .t...... | 8 | 87 |
MIMAT0035529 | bdi-miR845 | 6 | _......_ | 1 | 75 |
MIMAT0034886 | efu-miR-9189c | 8 | _......_ | 3 | 75 |
MIMAT0034757 | eca-miR-9177 | 1 | __...... | 6 | 75 |
MIMAT0034656 | eca-miR-9108 | 2 | __...... | 7 | 75 |
MIMAT0034588 | eca-miR-9045 | 1 | __...... | 6 | 75 |
MIMAT0034479 | eca-miR-8950 | 2 | ......__ | 7 | 75 |
MIMAT0034450 | eca-miR-8922 | 3 | __...... | 8 | 75 |
MIMAT0033592 | sma-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0033512 | sma-miR-8405-5p | 1 | ......__ | 6 | 75 |
MIMAT0033227 | ppc-miR-8341-5p | 3 | _......_ | 8 | 75 |
MIMAT0033022 | ppc-miR-8268-5p | 7 | ......__ | 2 | 75 |
MIMAT0032785 | cel-miR-8186-5p | 7 | __...... | 2 | 75 |
MIMAT0031660 | bbe-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0031300 | stu-miR156d-3p | 6 | ......__ | 1 | 75 |
MIMAT0030508 | prd-miR-46-5p | 3 | ......__ | 8 | 75 |
MIMAT0030319 | bdi-miR7782-3p | 8 | __...... | 3 | 75 |
MIMAT0030244 | bdi-miR7752-5p | 7 | _......_ | 2 | 75 |
MIMAT0029951 | bta-miR-6523b | 6 | __...... | 1 | 75 |
MIMAT0029899 | mmu-miR-7686-3p | 6 | __...... | 1 | 75 |
MIMAT0029879 | mmu-miR-3620-3p | 6 | __...... | 1 | 75 |
MIMAT0028791 | mdo-miR-7371j-3p | 1 | _......_ | 6 | 75 |
MIMAT0028787 | mdo-miR-7371g-3p | 2 | _......_ | 7 | 75 |
MIMAT0028785 | mdo-miR-7371f-3p | 2 | _......_ | 7 | 75 |
MIMAT0028783 | mdo-miR-7371e-3p | 3 | _......_ | 8 | 75 |
MIMAT0028781 | mdo-miR-7371d-3p | 2 | _......_ | 7 | 75 |
MIMAT0028779 | mdo-miR-7371c-3p | 2 | _......_ | 7 | 75 |
MIMAT0028775 | mdo-miR-7371b-3p | 3 | _......_ | 8 | 75 |
MIMAT0028773 | mdo-miR-7371a-3p | 3 | _......_ | 8 | 75 |
MIMAT0028560 | mdo-miR-7289-5p | 2 | __...... | 7 | 75 |
MIMAT0028400 | mmu-miR-7216-5p | 3 | ......__ | 8 | 75 |
MIMAT0028399 | mmu-miR-7215-3p | 6 | _......_ | 1 | 75 |
MIMAT0028341 | mml-miR-7191-3p | 6 | ......__ | 1 | 75 |
MIMAT0028331 | mml-miR-7188-3p | 8 | _......_ | 3 | 75 |
MIMAT0027981 | mmu-miR-7038-3p | 8 | __...... | 3 | 75 |
MIMAT0027965 | mmu-miR-7030-3p | 8 | _......_ | 3 | 75 |
MIMAT0027788 | mmu-miR-6944-5p | 3 | ......__ | 8 | 75 |
MIMAT0027557 | hsa-miR-6828-3p | 8 | __...... | 3 | 75 |
MIMAT0027511 | hsa-miR-6805-3p | 7 | _......_ | 2 | 75 |
MIMAT0025459 | hsa-miR-6501-3p | 3 | _......_ | 8 | 75 |
MIMAT0025154 | mmu-miR-6402 | 1 | __...... | 6 | 75 |
MIMAT0024805 | hvu-miR6181 | 6 | _......_ | 1 | 75 |
MIMAT0023706 | hsa-miR-6081 | 3 | __...... | 8 | 75 |
MIMAT0023312 | osa-miR5836 | 2 | __...... | 7 | 75 |
MIMAT0023046 | tur-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0022483 | hsa-miR-5691 | 7 | _......_ | 2 | 75 |
MIMAT0021510 | asu-miR-252-3p | 8 | __...... | 3 | 75 |
MIMAT0021457 | asu-miR-46-5p | 3 | ......__ | 8 | 75 |
MIMAT0021248 | mtr-miR5252 | 2 | ......__ | 7 | 75 |
MIMAT0020616 | mmu-miR-5108 | 3 | _......_ | 8 | 75 |
MIMAT0019779 | hsa-miR-4690-5p | 1 | __...... | 6 | 75 |
MIMAT0019400 | pma-miR-22b-5p | 7 | ......__ | 2 | 75 |
MIMAT0019388 | pma-miR-18a-3p | 8 | __...... | 3 | 75 |
MIMAT0016674 | cin-miR-4094-5p | 7 | _......_ | 2 | 75 |
MIMAT0016630 | cin-miR-4071-5p | 8 | _......_ | 3 | 75 |
MIMAT0016453 | cin-miR-4001d-3p | 8 | __...... | 3 | 75 |
MIMAT0016319 | ahy-miR156b-3p | 6 | ......__ | 1 | 75 |
MIMAT0016108 | ppy-miR-767-3p | 7 | __...... | 2 | 75 |
MIMAT0017420 | aly-miR157d-3p | 6 | ......__ | 1 | 75 |
MIMAT0017418 | aly-miR157c-3p | 6 | ......__ | 1 | 75 |
MIMAT0017416 | aly-miR157b-3p | 6 | ......__ | 1 | 75 |
MIMAT0017414 | aly-miR157a-3p | 6 | ......__ | 1 | 75 |
MIMAT0017412 | aly-miR156h-3p | 6 | ......__ | 1 | 75 |
MIMAT0014941 | mmu-miR-3105-5p | 1 | _......_ | 6 | 75 |
MIMAT0014678 | hma-miR-3010 | 2 | ......__ | 7 | 75 |
MIMAT0014497 | tgu-miR-2987-3p | 1 | _......_ | 6 | 75 |
MIMAT0026960 | tgu-miR-1784-5p | 8 | __...... | 3 | 75 |
MIMAT0014358 | cqu-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0014231 | aae-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0019196 | rlcv-miR-rL1-33-3p | 3 | _......_ | 8 | 75 |
MIMAT0013246 | eca-miR-767-3p | 7 | __...... | 2 | 75 |
MIMAT0012581 | aqc-miR408 | 6 | _......_ | 1 | 75 |
MIMAT0012301 | dps-miR-2518 | 3 | __...... | 8 | 75 |
MIMAT0020911 | dme-miR-2490-3p | 6 | _......_ | 1 | 75 |
MIMAT0011597 | crm-miR-46-5p | 3 | ......__ | 8 | 75 |
MIMAT0010140 | lmi-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0009060 | dya-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009190 | dya-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008994 | dwi-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009189 | dwi-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008926 | dvi-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009188 | dvi-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008905 | dsi-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0008782 | dse-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009187 | dse-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0009186 | dpe-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008727 | dpe-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009185 | dmo-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008641 | dmo-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009184 | dgr-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008587 | dgr-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0008501 | der-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009183 | der-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008428 | dan-miR-281-1-5p | 3 | ......__ | 8 | 75 |
MIMAT0009182 | dan-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0008384 | tca-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0007904 | bmo-miR-281-5p | 3 | ......__ | 8 | 75 |
MIMAT0007876 | mmu-miR-1907 | 1 | __...... | 6 | 75 |
MIMAT0006511 | mml-miR-767-3p | 7 | __...... | 2 | 75 |
MIMAT0007696 | gga-miR-1784-5p | 8 | __...... | 3 | 75 |
MIMAT0007695 | gga-miR-1783 | 6 | _......_ | 1 | 75 |
MIMAT0007676 | gga-miR-1768 | 1 | __...... | 6 | 75 |
MIMAT0007650 | gga-miR-1745 | 6 | _......_ | 1 | 75 |
MIMAT0007648 | gga-miR-1744-5p | 6 | _......_ | 1 | 75 |
MIMAT0007621 | gga-miR-1722-3p | 2 | _......_ | 7 | 75 |
MIMAT0007427 | gga-miR-1567 | 8 | __...... | 3 | 75 |
MIMAT0007040 | oan-miR-1372 | 2 | _......_ | 7 | 75 |
MIMAT0005271 | smo-miR1113 | 2 | __...... | 7 | 75 |
MIMAT0004415 | rrv-miR-rR1-7-5p | 3 | ......__ | 8 | 75 |
MIMAT0026728 | mtr-miR156g-3p | 6 | ......__ | 1 | 75 |
MIMAT0004310 | ath-miR863-3p | 3 | ......__ | 8 | 75 |
MIMAT0003883 | hsa-miR-767-3p | 7 | __...... | 2 | 75 |
MIMAT0002063 | ptc-miR473b | 6 | ......__ | 1 | 75 |
MIMAT0015181 | zma-miR319c-5p | 8 | ......__ | 3 | 75 |
MIMAT0015180 | zma-miR319a-5p | 8 | ......__ | 3 | 75 |
MIMAT0000349 | dme-miR-281-2-5p | 3 | ......__ | 8 | 75 |
MIMAT0031872 | ath-miR157c-3p | 6 | ......__ | 1 | 75 |
MIMAT0031871 | ath-miR157b-3p | 6 | ......__ | 1 | 75 |
MIMAT0031870 | ath-miR157a-3p | 6 | ......__ | 1 | 75 |
MIMAT0015097 | cel-miR-47-5p | 3 | ......__ | 8 | 75 |
MIMAT0015096 | cel-miR-46-5p | 3 | ......__ | 8 | 75 |