RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gagtgagg | 8 | ||
MIMAT0023068 | tur-miR-307-5p | 8 | ........ | 1 | 100 |
MIMAT0020010 | sko-miR-4818b-5p | 8 | ........ | 1 | 100 |
MIMAT0012172 | hbv-miR-B20-5p | 1 | ........ | 8 | 100 |
MIMAT0037095 | ata-miR156d-3p | 8 | ......._ | 2 | 87 |
MIMAT0035823 | bra-miR156d-3p | 8 | ......._ | 2 | 87 |
MIMAT0035819 | bra-miR156b-3p | 8 | ......._ | 2 | 87 |
MIMAT0034514 | eca-miR-8977 | 1 | _....... | 7 | 87 |
MIMAT0034004 | gra-miR8646 | 2 | _....... | 8 | 87 |
MIMAT0027779 | mmu-miR-6939-3p | 7 | _....... | 1 | 87 |
MIMAT0027489 | hsa-miR-6794-3p | 7 | ......._ | 1 | 87 |
MIMAT0017408 | aly-miR156f-3p | 8 | ......._ | 2 | 87 |
MIMAT0017404 | aly-miR156d-3p | 8 | ......._ | 2 | 87 |
MIMAT0010136 | lmi-miR-307-5p | 8 | ......._ | 2 | 87 |
MIMAT0009165 | osa-miR1846c-5p | 1 | _....... | 7 | 87 |
MIMAT0019129 | tca-miR-307-5p | 8 | ......._ | 2 | 87 |
MIMAT0007790 | osa-miR1846b-5p | 1 | _....... | 7 | 87 |
MIMAT0007788 | osa-miR1846a-5p | 1 | _....... | 7 | 87 |
MIMAT0015237 | bmo-miR-307-5p | 8 | ......._ | 2 | 87 |
MIMAT0022845 | osa-miR156b-3p | 8 | ......._ | 2 | 87 |
MIMAT0020832 | dme-miR-307a-5p | 8 | ......._ | 2 | 87 |
MIMAT0031869 | ath-miR156f-3p | 8 | ......._ | 2 | 87 |
MIMAT0031868 | ath-miR156d-3p | 8 | ......._ | 2 | 87 |
MIMAT0027626 | hsa-miR-6862-3p | 8 | .g...... | 1 | 87 |
MIMAT0019815 | hsa-miR-4710 | 1 | .g...... | 8 | 87 |
MIMAT0037119 | ata-miR156c-3p | 7 | _......_ | 2 | 75 |
MIMAT0036761 | oha-miR-181c-3p | 6 | _......_ | 1 | 75 |
MIMAT0036002 | chi-miR-181b-3p | 6 | _......_ | 1 | 75 |
MIMAT0035919 | chi-miR-1224 | 1 | __...... | 6 | 75 |
MIMAT0035829 | bra-miR156g-3p | 7 | _......_ | 2 | 75 |
MIMAT0035827 | bra-miR156f-3p | 8 | _......_ | 3 | 75 |
MIMAT0035821 | bra-miR156c-3p | 7 | _......_ | 2 | 75 |
MIMAT0035452 | sly-miR156d-3p | 7 | _......_ | 2 | 75 |
MIMAT0035330 | gsa-miR-9393-5p | 1 | __...... | 6 | 75 |
MIMAT0035244 | gsa-miR-279-5p | 1 | _......_ | 6 | 75 |
MIMAT0034873 | efu-miR-9255 | 6 | ......__ | 1 | 75 |
MIMAT0034820 | efu-miR-9223b | 2 | ......__ | 7 | 75 |
MIMAT0034715 | eca-miR-514a | 6 | ......__ | 1 | 75 |
MIMAT0034670 | eca-miR-483 | 6 | ......__ | 1 | 75 |
MIMAT0034618 | eca-miR-9073 | 2 | ......__ | 7 | 75 |
MIMAT0034063 | gra-miR8690 | 2 | ......__ | 7 | 75 |
MIMAT0032424 | ssa-miR-181b-3p | 6 | _......_ | 1 | 75 |
MIMAT0031392 | mmu-miR-8091 | 3 | ......__ | 8 | 75 |
MIMAT0031358 | stu-miR156k-3p | 7 | _......_ | 2 | 75 |
MIMAT0031356 | stu-miR156j-3p | 7 | _......_ | 2 | 75 |
MIMAT0031354 | stu-miR156i-3p | 7 | _......_ | 2 | 75 |
MIMAT0031352 | stu-miR156h-3p | 7 | _......_ | 2 | 75 |
MIMAT0031348 | stu-miR156f-3p | 6 | _......_ | 1 | 75 |
MIMAT0030825 | prd-miR-7962-3p | 8 | _......_ | 3 | 75 |
MIMAT0030666 | prd-miR-7916-5p | 2 | __...... | 7 | 75 |
MIMAT0030339 | hhi-miR-7794 | 1 | ......__ | 6 | 75 |
MIMAT0030078 | bdi-miR156h-3p | 7 | _......_ | 2 | 75 |
MIMAT0030074 | bdi-miR156f-3p | 7 | _......_ | 2 | 75 |
MIMAT0030072 | bdi-miR156e-3p | 7 | _......_ | 2 | 75 |
MIMAT0028735 | mdo-miR-7361-3p | 7 | ......__ | 2 | 75 |
MIMAT0028594 | mdo-miR-1643a-5p | 8 | __...... | 3 | 75 |
MIMAT0028391 | mmu-miR-7211-3p | 3 | ......__ | 8 | 75 |
MIMAT0028342 | mml-miR-7192-5p | 6 | ......__ | 1 | 75 |
MIMAT0028295 | mml-miR-6794-3p | 6 | ......__ | 1 | 75 |
MIMAT0028288 | mml-miR-6790-5p | 1 | _......_ | 6 | 75 |
MIMAT0028286 | mml-miR-7174-5p | 3 | ......__ | 8 | 75 |
MIMAT0028046 | mmu-miR-7070-5p | 1 | __...... | 6 | 75 |
MIMAT0028042 | mmu-miR-7068-5p | 1 | __...... | 6 | 75 |
MIMAT0028017 | mmu-miR-7056-3p | 6 | __...... | 1 | 75 |
MIMAT0027935 | mmu-miR-7015-3p | 7 | _......_ | 2 | 75 |
MIMAT0027887 | mmu-miR-6992-3p | 7 | _......_ | 2 | 75 |
MIMAT0027864 | mmu-miR-6981-5p | 1 | __...... | 6 | 75 |
MIMAT0027856 | mmu-miR-6977-5p | 1 | __...... | 6 | 75 |
MIMAT0027850 | mmu-miR-6974-5p | 1 | __...... | 6 | 75 |
MIMAT0027754 | mmu-miR-6927-5p | 1 | __...... | 6 | 75 |
MIMAT0027746 | mmu-miR-6923-5p | 1 | __...... | 6 | 75 |
MIMAT0027704 | mmu-miR-6902-5p | 8 | __...... | 3 | 75 |
MIMAT0027616 | hsa-miR-6858-5p | 1 | __...... | 6 | 75 |
MIMAT0027568 | hsa-miR-6834-5p | 1 | __...... | 6 | 75 |
MIMAT0027430 | hsa-miR-6765-5p | 1 | __...... | 6 | 75 |
MIMAT0025848 | hsa-miR-6511b-3p | 6 | __...... | 1 | 75 |
MIMAT0025810 | gga-miR-6700-3p | 6 | ......__ | 1 | 75 |
MIMAT0025780 | gga-miR-6677-5p | 6 | _......_ | 1 | 75 |
MIMAT0025669 | gga-miR-6581-5p | 1 | _......_ | 6 | 75 |
MIMAT0025479 | hsa-miR-6511a-3p | 6 | __...... | 1 | 75 |
MIMAT0025389 | ssc-miR-2411 | 3 | ......__ | 8 | 75 |
MIMAT0025201 | ptc-miR6468-3p | 2 | ......__ | 7 | 75 |
MIMAT0025018 | hme-miR-6311-3p | 2 | _......_ | 7 | 75 |
MIMAT0024985 | hme-miR-71 | 7 | _......_ | 2 | 75 |
MIMAT0027276 | ppe-miR6260 | 3 | ......__ | 8 | 75 |
MIMAT0024407 | ppy-miR-3174 | 2 | _......_ | 7 | 75 |
MIMAT0024271 | ggo-miR-3138 | 3 | _......_ | 8 | 75 |
MIMAT0024047 | ptr-miR-3138 | 3 | _......_ | 8 | 75 |
MIMAT0023800 | cgr-miR-181b-3p | 6 | _......_ | 1 | 75 |
MIMAT0023276 | osa-miR5805 | 3 | ......__ | 8 | 75 |
MIMAT0022541 | ola-miR-181b-3p | 6 | _......_ | 1 | 75 |
MIMAT0023041 | tur-miR-71-3p | 7 | _......_ | 2 | 75 |
MIMAT0022288 | hsa-miR-5586-3p | 3 | ......__ | 8 | 75 |
MIMAT0022041 | aca-miR-5421 | 3 | _......_ | 8 | 75 |
MIMAT0027069 | bdi-miR156d-3p | 7 | _......_ | 2 | 75 |
MIMAT0027057 | bdi-miR156b-3p | 7 | _......_ | 2 | 75 |
MIMAT0020507 | dme-miR-4914-5p | 3 | ......__ | 8 | 75 |
MIMAT0019916 | hsa-miR-4765 | 2 | ......__ | 7 | 75 |
MIMAT0019698 | hsa-miR-4639-3p | 6 | ......__ | 1 | 75 |
MIMAT0018106 | hsa-miR-3680-5p | 8 | _......_ | 3 | 75 |
MIMAT0018061 | dme-miR-3644-5p | 3 | ......__ | 8 | 75 |
MIMAT0016867 | hsa-miR-4316 | 2 | __...... | 7 | 75 |
MIMAT0016272 | sja-miR-2162-5p | 1 | _......_ | 6 | 75 |
MIMAT0016158 | ppy-miR-1224-5p | 1 | __...... | 6 | 75 |
MIMAT0016131 | ppy-miR-921 | 3 | _......_ | 8 | 75 |
MIMAT0016095 | ppy-miR-668 | 8 | ......__ | 3 | 75 |
MIMAT0015641 | mmu-miR-3470b | 6 | ......__ | 1 | 75 |
MIMAT0017638 | aly-miR847-3p | 6 | ......__ | 1 | 75 |
MIMAT0017402 | aly-miR156c-3p | 7 | _......_ | 2 | 75 |
MIMAT0017398 | aly-miR156a-3p | 7 | _......_ | 2 | 75 |
MIMAT0015051 | hsa-miR-3174 | 2 | _......_ | 7 | 75 |
MIMAT0031044 | tgu-miR-181b-2-3p | 7 | _......_ | 2 | 75 |
MIMAT0027003 | tgu-miR-181b-1-3p | 7 | _......_ | 2 | 75 |
MIMAT0014401 | cqu-miR-71-3p | 7 | _......_ | 2 | 75 |
MIMAT0014221 | aae-miR-71-3p | 7 | _......_ | 2 | 75 |
MIMAT0015308 | zma-miR156l-3p | 7 | _......_ | 2 | 75 |
MIMAT0012839 | rno-miR-668 | 8 | ......__ | 3 | 75 |
MIMAT0012827 | rno-miR-1224 | 1 | __...... | 6 | 75 |
MIMAT0012194 | dme-miR-307b-5p | 6 | ......__ | 1 | 75 |
MIMAT0012003 | bta-miR-677 | 6 | _......_ | 1 | 75 |
MIMAT0011972 | bta-miR-2411-5p | 3 | ......__ | 8 | 75 |
MIMAT0011932 | bta-miR-2383 | 3 | ......__ | 8 | 75 |
MIMAT0011821 | bta-miR-2309 | 2 | __...... | 7 | 75 |
MIMAT0009944 | bta-miR-1224 | 1 | __...... | 6 | 75 |
MIMAT0009901 | cfa-miR-483 | 6 | ......__ | 1 | 75 |
MIMAT0009327 | bta-miR-483 | 6 | ......__ | 1 | 75 |
MIMAT0032047 | dvi-miR-279-5p | 1 | _......_ | 6 | 75 |
MIMAT0019109 | tca-miR-71-3p | 7 | _......_ | 2 | 75 |
MIMAT0008313 | ptr-miR-668 | 8 | ......__ | 3 | 75 |
MIMAT0008013 | ptr-miR-1294 | 2 | __...... | 7 | 75 |
MIMAT0006504 | mml-miR-668 | 8 | ......__ | 3 | 75 |
MIMAT0007555 | gga-miR-1671 | 1 | __...... | 6 | 75 |
MIMAT0006836 | oan-miR-181b-1-3p | 6 | _......_ | 1 | 75 |
MIMAT0022720 | hsa-miR-1304-3p | 7 | _......_ | 2 | 75 |
MIMAT0005884 | hsa-miR-1294 | 2 | __...... | 7 | 75 |
MIMAT0022945 | hsa-miR-1236-5p | 2 | ......__ | 7 | 75 |
MIMAT0005576 | hsa-miR-1226-5p | 1 | __...... | 6 | 75 |
MIMAT0005570 | mml-miR-1224-5p | 1 | __...... | 6 | 75 |
MIMAT0005568 | ptr-miR-1224-5p | 1 | __...... | 6 | 75 |
MIMAT0005559 | mcmv-miR-m108-2-5p.2 | 6 | ......__ | 1 | 75 |
MIMAT0005181 | ppt-miR1062 | 8 | __...... | 3 | 75 |
MIMAT0005522 | cel-miR-1021 | 2 | _......_ | 7 | 75 |
MIMAT0004971 | hsa-miR-921 | 3 | _......_ | 8 | 75 |
MIMAT0026733 | mtr-miR156i-3p | 8 | _......_ | 3 | 75 |
MIMAT0022935 | mtr-miR398a-5p | 2 | ......__ | 7 | 75 |
MIMAT0026725 | mtr-miR156d-3p | 8 | _......_ | 3 | 75 |
MIMAT0026723 | mtr-miR156b-3p | 8 | _......_ | 3 | 75 |
MIMAT0004278 | ath-miR847 | 6 | ......__ | 1 | 75 |
MIMAT0015243 | bmo-miR-71-3p | 8 | _......_ | 3 | 75 |
MIMAT0003732 | mmu-miR-668-3p | 8 | ......__ | 3 | 75 |
MIMAT0005460 | mmu-miR-1224-5p | 1 | __...... | 6 | 75 |
MIMAT0005458 | hsa-miR-1224-5p | 1 | __...... | 6 | 75 |
MIMAT0003881 | hsa-miR-668-3p | 8 | ......__ | 3 | 75 |
MIMAT0003120 | mmu-miR-483-3p | 6 | ......__ | 1 | 75 |
MIMAT0002173 | hsa-miR-483-3p | 6 | ......__ | 1 | 75 |
MIMAT0032003 | dre-miR-430i-5p | 8 | __...... | 3 | 75 |
MIMAT0032002 | dre-miR-430a-17-5p | 8 | __...... | 3 | 75 |
MIMAT0032001 | dre-miR-430a-16-5p | 8 | __...... | 3 | 75 |
MIMAT0032000 | dre-miR-430a-15-5p | 8 | __...... | 3 | 75 |
MIMAT0031999 | dre-miR-430a-14-5p | 8 | __...... | 3 | 75 |
MIMAT0031998 | dre-miR-430a-13-5p | 8 | __...... | 3 | 75 |
MIMAT0031997 | dre-miR-430a-12-5p | 8 | __...... | 3 | 75 |
MIMAT0031996 | dre-miR-430a-11-5p | 8 | __...... | 3 | 75 |
MIMAT0031995 | dre-miR-430a-4-5p | 8 | __...... | 3 | 75 |
MIMAT0031994 | dre-miR-430a-5p | 8 | __...... | 3 | 75 |
MIMAT0015131 | zma-miR156i-3p | 7 | _......_ | 2 | 75 |
MIMAT0015130 | zma-miR156h-3p | 7 | _......_ | 2 | 75 |
MIMAT0015129 | zma-miR156a-3p | 7 | _......_ | 2 | 75 |
MIMAT0015128 | zma-miR156e-3p | 7 | _......_ | 2 | 75 |
MIMAT0015126 | zma-miR156g-3p | 7 | _......_ | 2 | 75 |
MIMAT0015125 | zma-miR156f-3p | 7 | _......_ | 2 | 75 |
MIMAT0015124 | zma-miR156d-3p | 7 | _......_ | 2 | 75 |
MIMAT0031920 | dre-miR-181b-3p | 6 | _......_ | 1 | 75 |
MIMAT0022866 | osa-miR156l-3p | 7 | _......_ | 2 | 75 |
MIMAT0017140 | rno-miR-181b-2-3p | 6 | _......_ | 1 | 75 |
MIMAT0017139 | rno-miR-181b-1-3p | 6 | _......_ | 1 | 75 |
MIMAT0017084 | mmu-miR-181b-2-3p | 6 | _......_ | 1 | 75 |
MIMAT0017067 | mmu-miR-181b-1-3p | 6 | _......_ | 1 | 75 |
MIMAT0031893 | hsa-miR-181b-2-3p | 6 | _......_ | 1 | 75 |
MIMAT0031157 | osa-miR156h-3p | 7 | _......_ | 2 | 75 |
MIMAT0022848 | osa-miR156g-3p | 7 | _......_ | 2 | 75 |
MIMAT0022847 | osa-miR156f-3p | 7 | _......_ | 2 | 75 |
MIMAT0022846 | osa-miR156c-3p | 7 | _......_ | 2 | 75 |
MIMAT0022692 | hsa-miR-181b-3p | 6 | _......_ | 1 | 75 |
MIMAT0031867 | ath-miR156c-3p | 7 | _......_ | 2 | 75 |
MIMAT0031865 | ath-miR156a-3p | 7 | _......_ | 2 | 75 |