Result for your query miRNA sequence
>rrv-miR-rr1-1-5p
gaucgcac

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gatcgcac8
MIMAT0032903ppc-miR-8229a-3p1......._787
MIMAT0018726tca-miR-3841-5p8_.......287
MIMAT0004406rrv-miR-rR1-1-5p2......._887
MIMAT0036374gma-miR97478_......_375
MIMAT0034637eca-miR-90928......__375
MIMAT0034520eca-miR-89836_......_175
MIMAT0033890atr-miR86016_......_175
MIMAT0033825atr-miR85546_......_175
MIMAT0033423str-miR-7880v-3p8_......_375
MIMAT0033322str-miR-7880f-3p8_......_375
MIMAT0032986ppc-miR-8259-5p6_......_175
MIMAT0030619prd-miR-7903-3p3__......875
MIMAT0030552prd-miR-7873b-5p8......__375
MIMAT0030219bdi-miR7726b-3p6_......_175
MIMAT0028967oan-miR-7410-3p6_......_175
MIMAT0028614mdo-miR-7308-5p7__......275
MIMAT0028310mml-miR-7182-5p1_......_675
MIMAT0022176osa-miR55408__......375
MIMAT0022139osa-miR55063......__875
MIMAT0027044bdi-miR160a-3p8__......375
MIMAT0020582osa-miR50826_......_175
MIMAT0020170dme-miR-4954-3p3......__875
MIMAT0018824tca-miR-3866-5p1__......675
MIMAT0018603ame-miR-37343__......875
MIMAT0016659cin-miR-4085-5p1__......675
MIMAT0014691hsv1-miR-H14-5p3__......875
MIMAT0014451tgu-miR-1451-5p1__......675
MIMAT0013702bmo-miR-27987__......275
MIMAT0011985bta-miR-2419-5p1_......_675
MIMAT0009773nve-miR-2027-3p7_......_275
MIMAT0008398hsv1-miR-H2-5p1__......675
MIMAT0006770cel-miR-1829b-5p8......__375
MIMAT0007324gga-miR-1451-5p1__......675
MIMAT0003445rlcv-miR-rL1-14-3p1__......675
MIMAT0003429rlcv-miR-rL1-31__......675
MIMAT0015209zma-miR160f-3p8__......375
MIMAT0022867osa-miR160e-3p8__......375
MIMAT0022854osa-miR160d-3p8__......375