VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>mdv2-miR-m16*
gaugcca

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`gatgcca`	7
MIMAT0037222	ata-miR172c-5p	8	`.......`	2	100
MIMAT0034882	efu-miR-9262	1	`.......`	7	100
MIMAT0027352	cln-miR6725	7	`.......`	1	100
MIMAT0019702	hsa-miR-4642	8	`.......`	2	100
MIMAT0017521	aly-miR172a-5p	8	`.......`	2	100
MIMAT0015622	bmo-miR-3415	1	`.......`	7	100
MIMAT0012282	dps-miR-3983	2	`.......`	8	100
MIMAT0007545	gga-miR-1663-3p	7	`.......`	1	100
MIMAT0012540	mdv2-miR-M16-3p	2	`.......`	8	100
MIMAT0037234	ata-miR394-5p	7	`_......`	2	85
MIMAT0035437	sly-miR394-5p	7	`_......`	2	85
MIMAT0035023	efu-miR-9318b	8	`......_`	3	85
MIMAT0034968	efu-miR-9300	1	`_......`	6	85
MIMAT0033936	atr-miR394	7	`_......`	2	85
MIMAT0033251	ppc-miR-8282b-3p	8	`_......`	3	85
MIMAT0033195	ppc-miR-8325-3p	8	`_......`	3	85
MIMAT0031816	cpa-miR394b	7	`_......`	2	85
MIMAT0031815	cpa-miR394a	7	`_......`	2	85
MIMAT0031476	ppe-miR394b	7	`_......`	2	85
MIMAT0031373	stu-miR384-5p	7	`_......`	2	85
MIMAT0030395	ptc-miR7839	8	`_......`	3	85
MIMAT0029915	mdo-miR-7301-3p	3	`_......`	8	85
MIMAT0029742	cbn-miR-357	3	`_......`	8	85
MIMAT0029267	mes-miR394c	7	`_......`	2	85
MIMAT0029266	mes-miR394b	7	`_......`	2	85
MIMAT0028156	ssc-miR-7140-3p	3	`......_`	8	85
MIMAT0026140	cme-miR394a	7	`_......`	2	85
MIMAT0026139	cme-miR394b	7	`_......`	2	85
MIMAT0025979	mdm-miR394b	7	`_......`	2	85
MIMAT0025978	mdm-miR394a	7	`_......`	2	85
MIMAT0025082	mmu-miR-6339	1	`......_`	6	85
MIMAT0024919	gma-miR394g	7	`_......`	2	85
MIMAT0031167	ppe-miR394a	7	`_......`	2	85
MIMAT0024704	nta-miR394	7	`_......`	2	85
MIMAT0027194	lus-miR394b	7	`_......`	2	85
MIMAT0027141	lus-miR394a	7	`_......`	2	85
MIMAT0024525	cca-miR394	7	`_......`	2	85
MIMAT0024417	mes-miR394a	7	`_......`	2	85
MIMAT0023635	bna-miR394b	7	`_......`	2	85
MIMAT0023634	bna-miR394a	7	`_......`	2	85
MIMAT0023239	gma-miR394f	7	`_......`	2	85
MIMAT0023230	gma-miR394e	7	`_......`	2	85
MIMAT0023210	gma-miR394d	7	`_......`	2	85
MIMAT0022515	ssl-miR394	7	`_......`	2	85
MIMAT0022391	ath-miR5020c	6	`_......`	1	85
MIMAT0022295	hsa-miR-5588-5p	8	`_......`	3	85
MIMAT0022672	aau-miR160	6	`_......`	1	85
MIMAT0021931	aca-miR-31-3p	2	`_......`	7	85
MIMAT0020720	bdi-miR5176-5p	2	`_......`	7	85
MIMAT0020690	bdi-miR394	7	`_......`	2	85
MIMAT0020529	ath-miR5020b	7	`_......`	2	85
MIMAT0020996	gma-miR394c-5p	7	`_......`	2	85
MIMAT0020162	dme-miR-4950-5p	3	`_......`	8	85
MIMAT0020424	tcc-miR394b	7	`_......`	2	85
MIMAT0020423	tcc-miR394a	7	`_......`	2	85
MIMAT0019977	hsa-miR-4799-3p	8	`_......`	3	85
MIMAT0019833	hsa-miR-4720-5p	8	`_......`	3	85
MIMAT0018461	csi-miR394	7	`_......`	2	85
MIMAT0022974	gma-miR394a-5p	7	`_......`	2	85
MIMAT0022973	gma-miR394b-5p	7	`_......`	2	85
MIMAT0017816	rno-miR-31b	3	`_......`	8	85
MIMAT0016326	ahy-miR394	7	`_......`	2	85
MIMAT0016163	ppy-miR-1227	2	`_......`	7	85
MIMAT0017701	aly-miR3435-5p	6	`_......`	1	85
MIMAT0017545	aly-miR394b-5p	7	`_......`	2	85
MIMAT0017543	aly-miR394a-5p	7	`_......`	2	85
MIMAT0014336	ghr-miR394a	7	`_......`	2	85
MIMAT0014335	ghr-miR394b	7	`_......`	2	85
MIMAT0015324	zma-miR169m-3p	6	`......_`	1	85
MIMAT0013260	mtr-miR2589	6	`......_`	1	85
MIMAT0012516	dsi-miR-303	7	`_......`	2	85
MIMAT0012347	dps-miR-2543b-3p	2	`_......`	7	85
MIMAT0012287	dps-miR-2503	3	`......_`	8	85
MIMAT0011349	sbi-miR394b	7	`_......`	2	85
MIMAT0009813	nve-miR-2044-3p	8	`_......`	3	85
MIMAT0006558	vvi-miR394c	7	`_......`	2	85
MIMAT0005710	vvi-miR394b	7	`_......`	2	85
MIMAT0005709	vvi-miR394a	7	`_......`	2	85
MIMAT0005121	ppt-miR1028c-3p	6	`_......`	1	85
MIMAT0026645	gga-miR-456-5p	8	`......_`	3	85
MIMAT0002020	ptc-miR394b-5p	7	`_......`	2	85
MIMAT0002019	ptc-miR394a-5p	7	`_......`	2	85
MIMAT0001697	zma-miR394b-5p	7	`_......`	2	85
MIMAT0001696	zma-miR394a-5p	7	`_......`	2	85
MIMAT0001427	sbi-miR394a	7	`_......`	2	85
MIMAT0000958	osa-miR394	7	`_......`	2	85
MIMAT0000937	ath-miR394b-5p	7	`_......`	2	85
MIMAT0000936	ath-miR394a	7	`_......`	2	85
MIMAT0000699	cel-miR-357-3p	3	`_......`	8	85