RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gccacctc | 8 | ||
MIMAT0035091 | efu-miR-9186o | 8 | ........ | 1 | 100 |
MIMAT0034959 | efu-miR-9186q | 8 | ........ | 1 | 100 |
MIMAT0004817 | ebv-miR-BART10-5p | 1 | ........ | 8 | 100 |
MIMAT0036496 | tch-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0035939 | chi-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0028777 | mdo-miR-7372-3p | 2 | _....... | 8 | 87 |
MIMAT0028240 | mml-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0028210 | dre-miR-1306 | 1 | _....... | 7 | 87 |
MIMAT0027978 | mmu-miR-7037-5p | 8 | ......._ | 2 | 87 |
MIMAT0027630 | hsa-miR-6865-5p | 8 | ......._ | 2 | 87 |
MIMAT0027530 | hsa-miR-6815-5p | 8 | ......._ | 2 | 87 |
MIMAT0024851 | rno-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0024618 | hsa-miR-6134 | 8 | _....... | 2 | 87 |
MIMAT0024609 | ptr-miR-6134 | 8 | _....... | 2 | 87 |
MIMAT0023752 | cgr-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0022590 | ola-miR-1306 | 1 | _....... | 7 | 87 |
MIMAT0020051 | sko-miR-4835-5p | 7 | ......._ | 1 | 87 |
MIMAT0013937 | ssc-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0009974 | bta-miR-1306 | 1 | _....... | 7 | 87 |
MIMAT0017350 | mmu-miR-1968-3p | 2 | _....... | 8 | 87 |
MIMAT0006661 | cfa-miR-1306 | 1 | _....... | 7 | 87 |
MIMAT0026770 | mdo-miR-1546-3p | 1 | _....... | 7 | 87 |
MIMAT0026763 | gga-miR-1306-5p | 2 | _....... | 8 | 87 |
MIMAT0007088 | oan-miR-1421u-5p | 7 | ......._ | 1 | 87 |
MIMAT0022726 | hsa-miR-1306-5p | 1 | _....... | 7 | 87 |
MIMAT0037235 | ata-miR394-3p | 6 | _......_ | 1 | 75 |
MIMAT0036685 | oha-miR-1306-5p | 3 | _......_ | 8 | 75 |
MIMAT0036267 | chi-miR-502b-3p | 3 | _......_ | 8 | 75 |
MIMAT0036049 | chi-miR-202-3p | 7 | __...... | 2 | 75 |
MIMAT0035785 | tae-miR9670-3p | 6 | _......_ | 1 | 75 |
MIMAT0035675 | bra-miR9560b-5p | 8 | _......_ | 3 | 75 |
MIMAT0035673 | bra-miR9560a-5p | 8 | _......_ | 3 | 75 |
MIMAT0035626 | dvi-miR-9543a-5p | 7 | __...... | 2 | 75 |
MIMAT0035441 | sly-miR9471b-5p | 6 | __...... | 1 | 75 |
MIMAT0035438 | sly-miR394-3p | 6 | _......_ | 1 | 75 |
MIMAT0035144 | efu-miR-9186i | 7 | ......__ | 2 | 75 |
MIMAT0034616 | eca-miR-9071 | 2 | ......__ | 7 | 75 |
MIMAT0034526 | eca-miR-8989 | 8 | ......__ | 3 | 75 |
MIMAT0034406 | cfa-miR-449b | 3 | ......__ | 8 | 75 |
MIMAT0034265 | gra-miR8689 | 7 | __...... | 2 | 75 |
MIMAT0033511 | sma-miR-125c-3p | 1 | __...... | 6 | 75 |
MIMAT0033505 | sma-miR-219-3p | 7 | __...... | 2 | 75 |
MIMAT0032770 | ath-miR8171 | 8 | _......_ | 3 | 75 |
MIMAT0031575 | bbe-miR-10b-3p | 8 | _......_ | 3 | 75 |
MIMAT0030835 | prd-miR-7966b-3p | 7 | __...... | 2 | 75 |
MIMAT0030429 | hsa-miR-7854-3p | 7 | __...... | 2 | 75 |
MIMAT0029856 | mmu-miR-7674-5p | 7 | __...... | 2 | 75 |
MIMAT0029823 | mmu-miR-7658-3p | 2 | _......_ | 7 | 75 |
MIMAT0029666 | cbn-miR-7624 | 7 | __...... | 2 | 75 |
MIMAT0029040 | gga-miR-7443-5p | 7 | ......__ | 2 | 75 |
MIMAT0029023 | oan-miR-7422b-3p | 1 | __...... | 6 | 75 |
MIMAT0028277 | mml-miR-7171-3p | 7 | ......__ | 2 | 75 |
MIMAT0027985 | mmu-miR-7040-3p | 2 | ......__ | 7 | 75 |
MIMAT0027602 | hsa-miR-6851-5p | 8 | __...... | 3 | 75 |
MIMAT0027504 | hsa-miR-6802-5p | 8 | _......_ | 3 | 75 |
MIMAT0027501 | hsa-miR-6800-3p | 1 | __...... | 6 | 75 |
MIMAT0027438 | hsa-miR-6769a-5p | 6 | _......_ | 1 | 75 |
MIMAT0025705 | gga-miR-6610-3p | 8 | ......__ | 3 | 75 |
MIMAT0025602 | gga-miR-6548-3p | 7 | __...... | 2 | 75 |
MIMAT0025017 | hme-miR-6310-3p | 8 | _......_ | 3 | 75 |
MIMAT0024796 | hbr-miR6175 | 7 | ......__ | 2 | 75 |
MIMAT0024070 | ptr-miR-3165 | 6 | _......_ | 1 | 75 |
MIMAT0023051 | tur-miR-5730-3p | 7 | ......__ | 2 | 75 |
MIMAT0022439 | ath-miR5662 | 7 | __...... | 2 | 75 |
MIMAT0022434 | ath-miR5660 | 7 | _......_ | 2 | 75 |
MIMAT0021252 | mtr-miR5254 | 8 | __...... | 3 | 75 |
MIMAT0021005 | gma-miR1507c-5p | 6 | __...... | 1 | 75 |
MIMAT0020238 | egr-miR-87-5p | 1 | _......_ | 6 | 75 |
MIMAT0020196 | dme-miR-4969-3p | 1 | _......_ | 6 | 75 |
MIMAT0019825 | hsa-miR-4715-3p | 3 | ......__ | 8 | 75 |
MIMAT0019282 | oar-miR-654-5p | 8 | _......_ | 3 | 75 |
MIMAT0019259 | oar-miR-323a-5p | 6 | _......_ | 1 | 75 |
MIMAT0019008 | hsa-miR-3689d | 8 | __...... | 3 | 75 |
MIMAT0018336 | gma-miR394b-3p | 6 | _......_ | 1 | 75 |
MIMAT0018905 | tca-miR-3900-3p | 8 | __...... | 3 | 75 |
MIMAT0018670 | tca-miR-3822-5p | 7 | __...... | 2 | 75 |
MIMAT0018540 | ame-miR-3766 | 7 | _......_ | 2 | 75 |
MIMAT0017965 | ssc-miR-1224 | 1 | __...... | 6 | 75 |
MIMAT0016771 | cin-miR-4163-3p | 3 | _......_ | 8 | 75 |
MIMAT0016274 | sja-miR-3479-5p | 6 | _......_ | 1 | 75 |
MIMAT0016268 | sja-miR-219-3p | 7 | __...... | 2 | 75 |
MIMAT0016159 | ppy-miR-1224-3p | 3 | _......_ | 8 | 75 |
MIMAT0016093 | ppy-miR-663b | 6 | ......__ | 1 | 75 |
MIMAT0015825 | ppy-miR-323-5p | 6 | _......_ | 1 | 75 |
MIMAT0017546 | aly-miR394b-3p | 6 | _......_ | 1 | 75 |
MIMAT0017544 | aly-miR394a-3p | 6 | _......_ | 1 | 75 |
MIMAT0015039 | hsa-miR-3165 | 6 | _......_ | 1 | 75 |
MIMAT0022956 | ssc-miR-202-3p | 7 | __...... | 2 | 75 |
MIMAT0013131 | eca-miR-323-5p | 6 | _......_ | 1 | 75 |
MIMAT0013048 | eca-miR-1902 | 7 | __...... | 2 | 75 |
MIMAT0013615 | bmo-miR-2755-5p | 8 | _......_ | 3 | 75 |
MIMAT0012330 | dps-miR-2538-5p | 7 | _......_ | 2 | 75 |
MIMAT0012031 | bta-miR-2451 | 8 | __...... | 3 | 75 |
MIMAT0011686 | ppc-miR-2260 | 8 | _......_ | 3 | 75 |
MIMAT0009755 | nve-miR-2023-5p | 3 | ......__ | 8 | 75 |
MIMAT0019136 | mmu-miR-1306-5p | 3 | _......_ | 8 | 75 |
MIMAT0008310 | ptr-miR-663b | 6 | ......__ | 1 | 75 |
MIMAT0007863 | mmu-miR-1902 | 7 | __...... | 2 | 75 |
MIMAT0006264 | mml-miR-323a-5p | 6 | _......_ | 1 | 75 |
MIMAT0007461 | gga-miR-1596-3p | 8 | _......_ | 3 | 75 |
MIMAT0006039 | odi-miR-1486 | 8 | _......_ | 3 | 75 |
MIMAT0006032 | odi-miR-1480 | 6 | ......__ | 1 | 75 |
MIMAT0006011 | ptc-miR1449 | 7 | __...... | 2 | 75 |
MIMAT0007297 | oan-miR-1421ag-5p | 6 | _......_ | 1 | 75 |
MIMAT0007084 | oan-miR-1421s-5p | 6 | _......_ | 1 | 75 |
MIMAT0007080 | oan-miR-1421q-5p | 6 | _......_ | 1 | 75 |
MIMAT0007074 | oan-miR-1421n-5p | 6 | _......_ | 1 | 75 |
MIMAT0007014 | oan-miR-449b-3p | 3 | ......__ | 8 | 75 |
MIMAT0005867 | hsa-miR-663b | 6 | ......__ | 1 | 75 |
MIMAT0005862 | mml-miR-1241 | 3 | __...... | 8 | 75 |
MIMAT0005571 | mml-miR-1224-3p | 3 | _......_ | 8 | 75 |
MIMAT0005569 | ptr-miR-1224-3p | 3 | _......_ | 8 | 75 |
MIMAT0005246 | smo-miR1093 | 8 | __...... | 3 | 75 |
MIMAT0005068 | ppt-miR537d | 8 | __...... | 3 | 75 |
MIMAT0005067 | ppt-miR537c | 8 | __...... | 3 | 75 |
MIMAT0005029 | dme-miR-1016-3p | 3 | __...... | 8 | 75 |
MIMAT0004407 | rrv-miR-rR1-1-3p | 2 | ......__ | 7 | 75 |
MIMAT0004274 | ath-miR851-3p | 8 | ......__ | 3 | 75 |
MIMAT0017231 | mmu-miR-1224-3p | 3 | _......_ | 8 | 75 |
MIMAT0005459 | hsa-miR-1224-3p | 3 | _......_ | 8 | 75 |
MIMAT0003166 | mmu-miR-546 | 8 | ......__ | 3 | 75 |
MIMAT0003146 | ppt-miR537b | 8 | __...... | 3 | 75 |
MIMAT0003145 | ppt-miR537a | 8 | __...... | 3 | 75 |
MIMAT0001741 | zma-miR171g-3p | 6 | __...... | 1 | 75 |
MIMAT0015163 | zma-miR394b-3p | 6 | _......_ | 1 | 75 |
MIMAT0015162 | zma-miR394a-3p | 6 | _......_ | 1 | 75 |
MIMAT0001570 | mghv-miR-M1-7-5p | 8 | _......_ | 3 | 75 |
MIMAT0001566 | mghv-miR-M1-3-3p | 6 | __...... | 1 | 75 |
MIMAT0001463 | sbi-miR171c | 6 | __...... | 1 | 75 |
MIMAT0001299 | cbr-miR-253 | 3 | __...... | 8 | 75 |
MIMAT0001068 | osa-miR171g | 6 | __...... | 1 | 75 |
MIMAT0031907 | ath-miR394b-3p | 6 | _......_ | 1 | 75 |
MIMAT0017108 | rno-miR-92a-2-5p | 6 | _......_ | 1 | 75 |
MIMAT0004696 | hsa-miR-323a-5p | 6 | _......_ | 1 | 75 |
MIMAT0017076 | mmu-miR-363-5p | 7 | _......_ | 2 | 75 |
MIMAT0004638 | mmu-miR-323-5p | 6 | _......_ | 1 | 75 |
MIMAT0004637 | rno-miR-323-5p | 6 | _......_ | 1 | 75 |
MIMAT0004635 | mmu-miR-92a-2-5p | 6 | _......_ | 1 | 75 |