RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gccgcctc | 8 | ||
MIMAT0019192 | rlcv-miR-rL1-27-5p | 1 | ........ | 8 | 100 |
MIMAT0034183 | gra-miR8754 | 2 | ......._ | 8 | 87 |
MIMAT0023712 | hsa-miR-6087 | 8 | _....... | 2 | 87 |
MIMAT0022362 | mmu-miR-5617-3p | 8 | ......._ | 2 | 87 |
MIMAT0018868 | tca-miR-3885-5p | 8 | ......._ | 2 | 87 |
MIMAT0018552 | ame-miR-3775 | 7 | _....... | 1 | 87 |
MIMAT0033770 | pxy-miR-8528b | 8 | ......g. | 1 | 87 |
MIMAT0037153 | ata-miR168-3p | 2 | _......_ | 7 | 75 |
MIMAT0036099 | chi-miR-25-5p | 6 | _......_ | 1 | 75 |
MIMAT0035837 | bra-miR168a-3p | 2 | _......_ | 7 | 75 |
MIMAT0035835 | bra-miR168c-3p | 2 | _......_ | 7 | 75 |
MIMAT0035833 | bra-miR168b-3p | 2 | _......_ | 7 | 75 |
MIMAT0035756 | bfv-miR-BF2-3p | 8 | _......_ | 3 | 75 |
MIMAT0034682 | eca-miR-9131 | 8 | __...... | 3 | 75 |
MIMAT0034505 | eca-miR-7045 | 8 | ......__ | 3 | 75 |
MIMAT0033748 | pxy-miR-8528a | 7 | ......__ | 2 | 75 |
MIMAT0032733 | ssa-miR-7132b-3p | 7 | __...... | 2 | 75 |
MIMAT0032562 | ssa-miR-25-3-5p | 6 | _......_ | 1 | 75 |
MIMAT0032560 | ssa-miR-25-5p | 6 | _......_ | 1 | 75 |
MIMAT0031644 | bbe-miR-210-3p | 1 | __...... | 6 | 75 |
MIMAT0030999 | hsa-miR-8072 | 6 | ......__ | 1 | 75 |
MIMAT0030539 | prd-miR-7885-3p | 3 | ......__ | 8 | 75 |
MIMAT0029902 | mmu-miR-7687-5p | 6 | _......_ | 1 | 75 |
MIMAT0031132 | sly-miR168b-3p | 2 | _......_ | 7 | 75 |
MIMAT0029104 | gga-miR-7475-5p | 3 | ......__ | 8 | 75 |
MIMAT0029001 | oan-miR-7425-3p | 7 | _......_ | 2 | 75 |
MIMAT0027856 | mmu-miR-6977-5p | 8 | __...... | 3 | 75 |
MIMAT0027766 | mmu-miR-6933-5p | 7 | ......__ | 2 | 75 |
MIMAT0027661 | hsa-miR-6880-3p | 1 | _......_ | 6 | 75 |
MIMAT0027441 | hsa-miR-6770-3p | 8 | ......__ | 3 | 75 |
MIMAT0027430 | hsa-miR-6765-5p | 8 | __...... | 3 | 75 |
MIMAT0027393 | hsa-miR-6746-3p | 3 | ......__ | 8 | 75 |
MIMAT0025740 | gga-miR-6642-3p | 8 | ......__ | 3 | 75 |
MIMAT0025622 | gga-miR-6556-3p | 6 | ......__ | 1 | 75 |
MIMAT0024405 | ppy-miR-2861 | 6 | ......__ | 1 | 75 |
MIMAT0024055 | ptr-miR-3937 | 8 | _......_ | 3 | 75 |
MIMAT0023869 | cgr-miR-25-5p | 6 | _......_ | 1 | 75 |
MIMAT0023703 | hsa-miR-6078 | 1 | _......_ | 6 | 75 |
MIMAT0023672 | ame-miR-6048 | 7 | __...... | 2 | 75 |
MIMAT0026458 | hhv6b-miR-Ro6-2-5p | 2 | ......__ | 7 | 75 |
MIMAT0022236 | mtr-miR168c-3p | 2 | _......_ | 7 | 75 |
MIMAT0021481 | asu-miR-87a-5p | 1 | _......_ | 6 | 75 |
MIMAT0027053 | bdi-miR168-3p | 2 | _......_ | 7 | 75 |
MIMAT0020167 | dme-miR-4952-3p | 1 | ......__ | 6 | 75 |
MIMAT0019688 | hsa-miR-4632-3p | 2 | ......__ | 7 | 75 |
MIMAT0019632 | pma-miR-4599a | 3 | ......__ | 8 | 75 |
MIMAT0019337 | hsa-miR-3960 | 6 | ......__ | 1 | 75 |
MIMAT0019336 | mmu-miR-3960 | 6 | ......__ | 1 | 75 |
MIMAT0032116 | hsa-miR-4485-5p | 2 | _......_ | 7 | 75 |
MIMAT0018994 | hsa-miR-4467 | 7 | ......__ | 2 | 75 |
MIMAT0018352 | hsa-miR-3937 | 8 | _......_ | 3 | 75 |
MIMAT0018841 | tca-miR-3874-3p | 1 | __...... | 6 | 75 |
MIMAT0018680 | tca-miR-3826-5p | 7 | __...... | 2 | 75 |
MIMAT0016610 | cin-miR-4061-5p | 6 | _......_ | 1 | 75 |
MIMAT0016202 | ppy-miR-1281 | 2 | __...... | 7 | 75 |
MIMAT0017482 | aly-miR168a-3p | 2 | _......_ | 7 | 75 |
MIMAT0015388 | bmo-miR-3209 | 7 | __...... | 2 | 75 |
MIMAT0015082 | hsa-miR-3197 | 7 | __...... | 2 | 75 |
MIMAT0014056 | osa-miR2925 | 7 | ......__ | 2 | 75 |
MIMAT0013857 | bta-miR-2899 | 6 | _......_ | 1 | 75 |
MIMAT0013843 | bta-miR-2885 | 7 | ......__ | 2 | 75 |
MIMAT0013518 | hsa-miR-2682-3p | 1 | __...... | 6 | 75 |
MIMAT0012321 | dps-miR-2532 | 8 | ......__ | 3 | 75 |
MIMAT0012313 | dps-miR-2525 | 8 | ......__ | 3 | 75 |
MIMAT0011986 | bta-miR-2419-3p | 7 | _......_ | 2 | 75 |
MIMAT0032101 | gma-miR2109-3p | 7 | __...... | 2 | 75 |
MIMAT0009962 | bta-miR-1281 | 2 | __...... | 7 | 75 |
MIMAT0019149 | bfl-miR-210-5p | 1 | __...... | 6 | 75 |
MIMAT0008309 | ptr-miR-663a | 6 | _......_ | 1 | 75 |
MIMAT0008000 | ptr-miR-1281 | 2 | __...... | 7 | 75 |
MIMAT0007870 | mmu-miR-1900 | 2 | ......__ | 7 | 75 |
MIMAT0006502 | mml-miR-663 | 6 | _......_ | 1 | 75 |
MIMAT0007567 | gga-miR-1680-3p | 7 | _......_ | 2 | 75 |
MIMAT0005939 | hsa-miR-1281 | 2 | __...... | 7 | 75 |
MIMAT0026636 | hsa-miR-668-5p | 3 | __...... | 8 | 75 |
MIMAT0003326 | hsa-miR-663a | 6 | _......_ | 1 | 75 |
MIMAT0022897 | ptc-miR168b-3p | 2 | _......_ | 7 | 75 |
MIMAT0022896 | ptc-miR168a-3p | 2 | _......_ | 7 | 75 |
MIMAT0031946 | dre-miR-25-5p | 6 | _......_ | 1 | 75 |
MIMAT0015192 | zma-miR168b-3p | 2 | _......_ | 7 | 75 |
MIMAT0015191 | zma-miR168a-3p | 2 | _......_ | 7 | 75 |
MIMAT0004713 | rno-miR-25-5p | 6 | _......_ | 1 | 75 |
MIMAT0017049 | mmu-miR-25-5p | 6 | _......_ | 1 | 75 |
MIMAT0031884 | ath-miR168a-3p | 2 | _......_ | 7 | 75 |
MIMAT0004498 | hsa-miR-25-5p | 6 | _......_ | 1 | 75 |