| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gccgggg | 7 | ||
| MIMAT0027468 | hsa-miR-6784-5p | 1 | ....... | 7 | 100 |
| MIMAT0020115 | bfl-miR-4872b | 2 | ....... | 8 | 100 |
| MIMAT0019807 | hsa-miR-4707-5p | 8 | ....... | 2 | 100 |
| MIMAT0016595 | cin-miR-4053-5p | 2 | ....... | 8 | 100 |
| MIMAT0014549 | tgu-miR-2992 | 7 | ....... | 1 | 100 |
| MIMAT0013848 | bta-miR-2890 | 8 | ....... | 2 | 100 |
| MIMAT0035228 | dme-miR-9382-3p | 8 | _...... | 3 | 85 |
| MIMAT0031770 | hbv-miR-B21RC-5p | 3 | ......_ | 8 | 85 |
| MIMAT0031763 | hbv-miR-B2-3p | 3 | ......_ | 8 | 85 |
| MIMAT0028705 | mdo-miR-7346-3p | 1 | ......_ | 6 | 85 |
| MIMAT0026409 | sbi-miR6221-3p | 1 | _...... | 6 | 85 |
| MIMAT0028022 | mmu-miR-7059-5p | 2 | _...... | 7 | 85 |
| MIMAT0027911 | mmu-miR-7003-3p | 6 | _...... | 1 | 85 |
| MIMAT0027601 | hsa-miR-6850-3p | 6 | ......_ | 1 | 85 |
| MIMAT0027582 | hsa-miR-6840-5p | 8 | _...... | 3 | 85 |
| MIMAT0027427 | hsa-miR-6763-3p | 8 | _...... | 3 | 85 |
| MIMAT0025819 | gga-miR-6709-5p | 8 | ......_ | 3 | 85 |
| MIMAT0025310 | prv-miR-LLT7 | 1 | _...... | 6 | 85 |
| MIMAT0023269 | osa-miR5800 | 6 | ......_ | 1 | 85 |
| MIMAT0022290 | hsa-miR-5587-3p | 7 | _...... | 2 | 85 |
| MIMAT0021082 | hsa-miR-5090 | 1 | _...... | 6 | 85 |
| MIMAT0020498 | bfl-miR-4903 | 8 | _...... | 3 | 85 |
| MIMAT0019947 | hsa-miR-4783-3p | 6 | _...... | 1 | 85 |
| MIMAT0019721 | hsa-miR-4655-5p | 3 | _...... | 8 | 85 |
| MIMAT0019574 | pma-miR-4544-3p | 2 | _...... | 7 | 85 |
| MIMAT0019071 | hsa-miR-4532 | 6 | _...... | 1 | 85 |
| MIMAT0019071 | hsa-miR-4532 | 3 | _...... | 8 | 85 |
| MIMAT0018556 | ame-miR-3779 | 1 | ......_ | 6 | 85 |
| MIMAT0014693 | hsv1-miR-H15 | 8 | _...... | 3 | 85 |
| MIMAT0013847 | bta-miR-2889 | 8 | _...... | 3 | 85 |
| MIMAT0012600 | bmo-miR-2724 | 8 | _...... | 3 | 85 |
| MIMAT0012598 | hsv1-miR-H8-3p | 8 | _...... | 3 | 85 |
| MIMAT0020945 | mtr-miR2592a-5p | 6 | ......_ | 1 | 85 |
| MIMAT0011808 | bta-miR-2299-3p | 2 | _...... | 7 | 85 |
| MIMAT0009443 | mmu-miR-1946b | 1 | ......_ | 6 | 85 |
| MIMAT0007717 | gga-miR-1801 | 6 | ......_ | 1 | 85 |
| MIMAT0007419 | gga-miR-1561 | 1 | ......_ | 6 | 85 |
| MIMAT0026773 | mdo-miR-1549-5p | 3 | ......_ | 8 | 85 |
| MIMAT0007196 | oan-miR-1394 | 2 | _...... | 7 | 85 |
| MIMAT0022721 | hsa-miR-1247-3p | 6 | _...... | 1 | 85 |
| MIMAT0005395 | cre-miR1151b-5p | 2 | _...... | 7 | 85 |
| MIMAT0005393 | cre-miR1151a-5p | 2 | _...... | 7 | 85 |
| MIMAT0004984 | hsa-miR-941 | 8 | ......_ | 3 | 85 |
| MIMAT0004824 | mmu-miR-673-3p | 2 | _...... | 7 | 85 |
| MIMAT0000327 | cel-miR-271 | 3 | ......_ | 8 | 85 |
