| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gctgcgc | 7 | ||
| MIMAT0036336 | ocu-miR-191-3p | 1 | ....... | 7 | 100 |
| MIMAT0034906 | efu-miR-191 | 1 | ....... | 7 | 100 |
| MIMAT0011215 | mmu-miR-2139 | 2 | ....... | 8 | 100 |
| MIMAT0006481 | mml-miR-639 | 8 | ....... | 2 | 100 |
| MIMAT0026834 | mml-miR-191-3p | 1 | ....... | 7 | 100 |
| MIMAT0005801 | mdv1-miR-M1-3p | 2 | ....... | 8 | 100 |
| MIMAT0001618 | hsa-miR-191-3p | 1 | ....... | 7 | 100 |
| MIMAT0036643 | oha-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0036023 | chi-miR-191-3p | 1 | _...... | 6 | 85 |
| MIMAT0035895 | chi-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0035409 | nve-miR-9448 | 8 | ......_ | 3 | 85 |
| MIMAT0033234 | ppc-miR-8344-5p | 1 | ......_ | 6 | 85 |
| MIMAT0032276 | ssa-let-7i-2-3p | 1 | _...... | 6 | 85 |
| MIMAT0032275 | ssa-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0031658 | bbe-miR-252b-3p | 3 | _...... | 8 | 85 |
| MIMAT0030311 | bdi-miR7778-3p | 1 | _...... | 6 | 85 |
| MIMAT0031151 | aja-let-7i | 1 | _...... | 6 | 85 |
| MIMAT0028575 | mdo-miR-7295-3p | 3 | _...... | 8 | 85 |
| MIMAT0023823 | cgr-miR-191-3p | 1 | _...... | 6 | 85 |
| MIMAT0023724 | cgr-let-7i | 1 | _...... | 6 | 85 |
| MIMAT0021888 | aca-miR-22-3p | 3 | ......_ | 8 | 85 |
| MIMAT0021708 | aca-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0020549 | hvu-miR5053 | 6 | ......_ | 1 | 85 |
| MIMAT0019859 | hsa-miR-4734 | 1 | ......_ | 6 | 85 |
| MIMAT0016690 | cin-miR-4103-3p | 3 | ......_ | 8 | 85 |
| MIMAT0016373 | gga-miR-3523 | 8 | _...... | 3 | 85 |
| MIMAT0016046 | ppy-miR-604 | 3 | ......_ | 8 | 85 |
| MIMAT0014708 | hsv2-miR-H25 | 1 | _...... | 6 | 85 |
| MIMAT0014664 | bmo-miR-3000 | 1 | _...... | 6 | 85 |
| MIMAT0026974 | tgu-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0012809 | ptr-miR-604 | 3 | ......_ | 8 | 85 |
| MIMAT0012710 | hvt-miR-H1 | 6 | _...... | 1 | 85 |
| MIMAT0012008 | bta-miR-2436-5p | 8 | _...... | 3 | 85 |
| MIMAT0009784 | nve-miR-2032a-5p | 3 | ......_ | 8 | 85 |
| MIMAT0019151 | bfl-miR-252b-3p | 3 | _...... | 8 | 85 |
| MIMAT0007401 | hsa-miR-1539 | 3 | _...... | 8 | 85 |
| MIMAT0006966 | oan-miR-1421b-3p | 8 | _...... | 3 | 85 |
| MIMAT0005261 | smo-miR1104 | 6 | ......_ | 1 | 85 |
| MIMAT0003272 | hsa-miR-604 | 3 | ......_ | 8 | 85 |
| MIMAT0015147 | zma-miR162-5p | 8 | _...... | 3 | 85 |
| MIMAT0004707 | rno-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0004585 | hsa-let-7i-3p | 1 | _...... | 6 | 85 |
| MIMAT0004520 | mmu-let-7i-3p | 1 | _...... | 6 | 85 |
