Result for your query miRNA sequence
>mghv-miR-m1-11-5p
gcuguca

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gctgtca7
MIMAT0034781efu-miR-9198c2.......8100
MIMAT0033695pxy-miR-84882.......8100
MIMAT0032897ppc-miR-8226-3p8.......2100
MIMAT0029910mmu-miR-7243-5p2.......8100
MIMAT0029800mmu-miR-7649-5p7.......1100
MIMAT0018168mghv-miR-M1-11-5p2.......8100
MIMAT0011777hsa-miR-2277-3p7.......1100
MIMAT0026628hcmv-miR-US4-3p7.......1100
MIMAT0037238ata-miR156e-5p6_......185
MIMAT0037132ata-miR156b-5p6_......185
MIMAT0037122ata-miR156a-5p6_......185
MIMAT0037118ata-miR156c-5p6_......185
MIMAT0037094ata-miR156d-5p6_......185
MIMAT0036832oha-miR-215-3p1_......685
MIMAT0036613tch-miR-542-3p8_......385
MIMAT0036273chi-miR-542-3p8_......385
MIMAT0035828bra-miR156g-5p6_......185
MIMAT0035826bra-miR156f-5p6_......185
MIMAT0035824bra-miR156e-5p6_......185
MIMAT0035822bra-miR156d-5p6_......185
MIMAT0035820bra-miR156c-5p6_......185
MIMAT0035818bra-miR156b-5p6_......185
MIMAT0035816bra-miR156a-5p6_......185
MIMAT0035815hvu-miR156b6_......185
MIMAT0035509bdi-miR156j6_......185
MIMAT0035451sly-miR156d-5p6_......185
MIMAT0035395nve-miR-94348_......385
MIMAT0035378nve-miR-94226_......185
MIMAT0034720eca-miR-91448_......385
MIMAT0034700eca-miR-24832_......785
MIMAT0033996gra-miR86408_......385
MIMAT0033910atr-miR156d6_......185
MIMAT0033909atr-miR156c7_......285
MIMAT0033908atr-miR156b6_......185
MIMAT0033907atr-miR156a7_......285
MIMAT0033636sma-miR-96-3p6_......185
MIMAT0032941ppc-miR-2238i-3p8_......385
MIMAT0032931ppc-miR-2238h-3p8_......385
MIMAT0032735ssa-miR-8156-3p1_......685
MIMAT0032443ssa-miR-192b-5p2_......785
MIMAT0032442ssa-miR-192a-2-3p2_......785
MIMAT0032441ssa-miR-192a-3p2_......785
MIMAT0031854lus-miR156h7_......285
MIMAT0031779cpa-miR156f7_......285
MIMAT0031778cpa-miR156e7_......285
MIMAT0031777cpa-miR156d6_......185
MIMAT0031776cpa-miR156c6_......185
MIMAT0031775cpa-miR156b6_......185
MIMAT0031774cpa-miR156a6_......185
MIMAT0031679bbe-miR-4859-3p6_......185
MIMAT0031436ppe-miR156i7_......285
MIMAT0031435ppe-miR156h7_......285
MIMAT0031434ppe-miR156g7_......285
MIMAT0031433ppe-miR156f6_......185
MIMAT0031432ppe-miR156e6_......185
MIMAT0031431ppe-miR156d6_......185
MIMAT0031430ppe-miR156c6_......185
MIMAT0031429ppe-miR156b6_......185
MIMAT0031428ppe-miR156a6_......185
MIMAT0031357stu-miR156k-5p6_......185
MIMAT0031355stu-miR156j-5p6_......185
MIMAT0031353stu-miR156i-5p6_......185
MIMAT0031351stu-miR156h-5p6_......185
MIMAT0031349stu-miR156g-5p6_......185
MIMAT0031347stu-miR156f-5p7_......285
MIMAT0031346stu-miR156e6_......185
MIMAT0031299stu-miR156d-5p7_......285
MIMAT0031298stu-miR156c7_......285
MIMAT0031297stu-miR156b7_......285
MIMAT0031296stu-miR156a7_......285
MIMAT0030475prd-let-7-3p2_......785
MIMAT0030079bdi-miR156i-5p6_......185
MIMAT0030077bdi-miR156h-5p6_......185
MIMAT0030075bdi-miR156g-5p6_......185
MIMAT0030073bdi-miR156f-5p6_......185
MIMAT0030071bdi-miR156e-5p6_......185
MIMAT0031153ama-miR1567_......285
MIMAT0029175mes-miR156k6_......185
MIMAT0029174mes-miR156j7_......285
MIMAT0029173mes-miR156i7_......285
MIMAT0029172mes-miR156h7_......285
MIMAT0029171mes-miR156g6_......185
MIMAT0029170mes-miR156f6_......185
MIMAT0029169mes-miR156e6_......185
MIMAT0029168mes-miR156d6_......185
MIMAT0029167mes-miR156c6_......185
MIMAT0029166mes-miR156b6_......185
MIMAT0029165mes-miR156a6_......185
MIMAT0028647mdo-miR-7323-3p1_......685
MIMAT0028245mml-miR-7163-3p6......_185
MIMAT0026186cme-miR156j8_......385
MIMAT0026159cme-miR156g6_......185
MIMAT0026158cme-miR156h6_......185
MIMAT0026156cme-miR156e7_......285
MIMAT0026151cme-miR156f6_......185
MIMAT0026131cme-miR156b7_......285
MIMAT0026121cme-miR156c6_......185
MIMAT0026111cme-miR156d6_......185
MIMAT0026105cme-miR156i6_......185
MIMAT0026071cme-miR156a6_......185
MIMAT0025897mdm-miR156ae6_......185
MIMAT0025896mdm-miR156ad6_......185
MIMAT0025895mdm-miR156ac7_......285
MIMAT0025894mdm-miR156ab7_......285
MIMAT0025893mdm-miR156aa6_......185
MIMAT0025892mdm-miR156z6_......185
MIMAT0025891mdm-miR156y6_......185
MIMAT0025890mdm-miR156x6_......185
MIMAT0025889mdm-miR156w7_......285
MIMAT0025888mdm-miR156v7_......285
MIMAT0025887mdm-miR156u7_......285
MIMAT0025886mdm-miR156t7_......285
MIMAT0025885mdm-miR156s7_......285
MIMAT0025884mdm-miR156r7_......285
MIMAT0025883mdm-miR156q7_......285
MIMAT0025882mdm-miR156p7_......285
MIMAT0025881mdm-miR156o6_......185
MIMAT0025880mdm-miR156n6_......185
MIMAT0025879mdm-miR156m6_......185
MIMAT0025878mdm-miR156l6_......185
MIMAT0025877mdm-miR156k6_......185
MIMAT0025876mdm-miR156j6_......185
MIMAT0025875mdm-miR156i6_......185
MIMAT0025874mdm-miR156h6_......185
MIMAT0025873mdm-miR156g6_......185
MIMAT0025872mdm-miR156f6_......185
MIMAT0025871mdm-miR156e6_......185
MIMAT0025870mdm-miR156d6_......185
MIMAT0025869mdm-miR156c6_......185
MIMAT0025868mdm-miR156b6_......185
MIMAT0025867mdm-miR156a6_......185
MIMAT0027447hsa-miR-6773-3p2_......785
MIMAT0025555bta-miR-36608_......385
MIMAT0025496han-miR156c7_......285
MIMAT0025495har-miR156c6_......185
MIMAT0025494hpa-miR156a6_......185
MIMAT0025493har-miR156a6_......185
MIMAT0025492htu-miR156a6_......185
MIMAT0025491hci-miR156b6_......185
MIMAT0025490hci-miR156a6_......185
MIMAT0025489han-miR156b6_......185
MIMAT0025488han-miR156a6_......185
MIMAT0025282hbr-miR1567_......285
MIMAT0025268ptc-miR156l7_......285
MIMAT0025252ptc-miR64233......_885
MIMAT0025160mmu-miR-64073......_885
MIMAT0024967hme-miR-2812_......785
MIMAT0024884gma-miR156y6_......185
MIMAT0024883gma-miR156x6_......185
MIMAT0024882gma-miR156w6_......185
MIMAT0024881gma-miR156v6_......185
MIMAT0024880gma-miR156u6_......185
MIMAT0024638nta-miR156j6_......185
MIMAT0024637nta-miR156i6_......185
MIMAT0024636nta-miR156h6_......185
MIMAT0024635nta-miR156g6_......185
MIMAT0024634nta-miR156f6_......185
MIMAT0024633nta-miR156e6_......185
MIMAT0024632nta-miR156d6_......185
MIMAT0024631nta-miR156c6_......185
MIMAT0024630nta-miR156b6_......185
MIMAT0024629nta-miR156a6_......185
MIMAT0027216lus-miR156a6_......185
MIMAT0027201lus-miR156g6_......185
MIMAT0027186lus-miR156f7_......285
MIMAT0027184lus-miR156e7_......285
MIMAT0027180lus-miR156d6_......185
MIMAT0027179lus-miR156c7_......285
MIMAT0027178lus-miR156i7_......285
MIMAT0027161lus-miR156b7_......285
MIMAT0024512cca-miR156c7_......285
MIMAT0024511cca-miR156b6_......185
MIMAT0024510cca-miR156a6_......185
MIMAT0024446mse-miR-2811_......685
MIMAT0024393ppy-miR-45268_......385
MIMAT0024231ggo-miR-5428_......385
MIMAT0024040ptr-miR-36608_......385
MIMAT0023984cgr-miR-542-3p8_......385
MIMAT0023854cgr-miR-215-3p2_......785
MIMAT0023616bna-miR156g7_......285
MIMAT0023615bna-miR156f6_......185
MIMAT0023614bna-miR156e6_......185
MIMAT0023613bna-miR156d6_......185
MIMAT0023527dpr-miR156b6_......185
MIMAT0023526dpr-miR156a6_......185
MIMAT0023259osa-miR57928_......385
MIMAT0023225gma-miR156t7_......285
MIMAT0023216gma-miR156s6_......185
MIMAT0023212gma-miR156r7_......285
MIMAT0023203gma-miR156q6_......185
MIMAT0023196gma-miR156p7_......285
MIMAT0022753vun-miR156b7_......285
MIMAT0022752vun-miR156a6_......185
MIMAT0022625ola-miR-192-3p2_......785
MIMAT0022506ssl-miR1566_......185
MIMAT0022423ath-miR156j6_......185
MIMAT0022421ath-miR156i6_......185
MIMAT0021874aca-miR-215-3p1_......685
MIMAT0021681sbi-miR53837_......285
MIMAT0021639gma-miR156o7_......285
MIMAT0021638gma-miR156n7_......285
MIMAT0021637gma-miR156m7_......285
MIMAT0021636gma-miR156l7_......285
MIMAT0021635gma-miR156k7_......285
MIMAT0021634gma-miR156j7_......285
MIMAT0021272mtr-miR156j6_......185
MIMAT0021262mtr-miR52622_......785
MIMAT0020291ssp-miR1566_......185
MIMAT0020697bdi-miR156d-5p6_......185
MIMAT0020684bdi-miR156c6_......185
MIMAT0020679bdi-miR156b-5p6_......185
MIMAT0021065gma-miR1521b3_......885
MIMAT0020969gma-miR156i7_......285
MIMAT0020968gma-miR156h6_......185
MIMAT0020490bfl-miR-48981......_685
MIMAT0020087bfl-miR-4859-3p6_......185
MIMAT0020375tcc-miR156g6_......185
MIMAT0020374tcc-miR156f7_......285
MIMAT0020373tcc-miR156e7_......285
MIMAT0020372tcc-miR156d6_......185
MIMAT0020371tcc-miR156c6_......185
MIMAT0020370tcc-miR156b6_......185
MIMAT0020369tcc-miR156a6_......185
MIMAT0019498pma-miR-192-3p2_......785
MIMAT0020964bcy-miR1568_......385
MIMAT0020960bgy-miR1568_......385
MIMAT0019065hsa-miR-45268_......385
MIMAT0018448csi-miR1566_......185
MIMAT0018374far-miR156b7_......285
MIMAT0018368far-miR156a6_......185
MIMAT0018318gma-miR156f7_......285
MIMAT0018208tae-miR1566_......185
MIMAT0018207hvu-miR156a6_......185
MIMAT0018081hsa-miR-36608_......385
MIMAT0016725cin-miR-4130-3p8......_385
MIMAT0016721cin-miR-4127-5p6......_185
MIMAT0017827rno-miR-3559-5p6_......185
MIMAT0016320ahy-miR156c7_......285
MIMAT0016318ahy-miR156b-5p7_......285
MIMAT0016317ahy-miR156a6_......185
MIMAT0015992ppy-miR-542-3p8_......385
MIMAT0017419aly-miR157d-5p6_......185
MIMAT0017417aly-miR157c-5p7_......285
MIMAT0017415aly-miR157b-5p7_......285
MIMAT0017413aly-miR157a-5p7_......285
MIMAT0017411aly-miR156h-5p6_......185
MIMAT0017407aly-miR156f-5p6_......185
MIMAT0017405aly-miR156e-5p6_......185
MIMAT0017403aly-miR156d-5p6_......185
MIMAT0017401aly-miR156c-5p6_......185
MIMAT0017399aly-miR156b-5p6_......185
MIMAT0017397aly-miR156a-5p6_......185
MIMAT0027009tgu-miR-215-3p2_......785
MIMAT0014151rco-miR156h7_......285
MIMAT0014150rco-miR156g7_......285
MIMAT0014149rco-miR156f7_......285
MIMAT0014148rco-miR156e6_......185
MIMAT0014147rco-miR156d6_......185
MIMAT0014146rco-miR156c6_......185
MIMAT0014145rco-miR156b6_......185
MIMAT0014144rco-miR156a6_......185
MIMAT0014067ctr-miR1566_......185
MIMAT0013973zma-miR156l-5p6_......185
MIMAT0013925ssc-miR-542-3p8_......385
MIMAT0013238eca-miR-542-3p8_......385
MIMAT0012551aqc-miR156a6_......185
MIMAT0012550aqc-miR156b6_......185
MIMAT0012181bdi-miR156a6_......185
MIMAT0011912bta-miR-2368-3p2_......785
MIMAT0011719ppc-miR-2238e8_......385
MIMAT0011693ppc-miR-2238c8_......385
MIMAT0011692ppc-miR-2238a8_......385
MIMAT0011323sbi-miR156i6_......185
MIMAT0011322sbi-miR156h6_......185
MIMAT0011321sbi-miR156g6_......185
MIMAT0011320sbi-miR156f6_......185
MIMAT0010169bol-miR157a7_......285
MIMAT0010152bra-miR157a7_......285
MIMAT0009140sly-miR156c7_......285
MIMAT0009139sly-miR156b7_......285
MIMAT0009138sly-miR156a7_......285
MIMAT0007905bmo-miR-281-3p2_......785
MIMAT0007896bmo-miR-13a-5p2_......785
MIMAT0006747cfa-miR-5428_......385
MIMAT0006544vvi-miR156h6_......185
MIMAT0006407mml-miR-542-3p8_......385
MIMAT0007387gma-miR1520b7_......285
MIMAT0007001oan-miR-215-3p2_......785
MIMAT0005647vvi-miR156i7_......285
MIMAT0005646vvi-miR156g7_......285
MIMAT0005645vvi-miR156f7_......285
MIMAT0005644vvi-miR156e6_......185
MIMAT0005643vvi-miR156d6_......185
MIMAT0005642vvi-miR156c6_......185
MIMAT0005641vvi-miR156b6_......185
MIMAT0005640vvi-miR156a6_......185
MIMAT0005639bna-miR156c7_......285
MIMAT0005636bna-miR156b7_......285
MIMAT0005245smo-miR10926_......185
MIMAT0005216smo-miR156d7_......285
MIMAT0005215smo-miR156c7_......285
MIMAT0005214smo-miR156b7_......285
MIMAT0004445bna-miR156a6_......185
MIMAT0004384ppt-miR156b6_......185
MIMAT0004346ppt-miR156c6_......185
MIMAT0005811gra-miR157b7_......285
MIMAT0005810gra-miR157a7_......285
MIMAT0005809ghr-miR156d6_......185
MIMAT0005807ghr-miR156b6_......185
MIMAT0005806ghr-miR156a6_......185
MIMAT0011112mtr-miR156i-5p6_......185
MIMAT0011099mtr-miR156h-5p7_......285
MIMAT0011093mtr-miR156g-5p7_......285
MIMAT0011091mtr-miR156f7_......285
MIMAT0011081mtr-miR156e7_......285
MIMAT0011071mtr-miR156d-5p6_......185
MIMAT0011070mtr-miR156c-5p6_......185
MIMAT0011057mtr-miR156b-5p6_......185
MIMAT0003914ppt-miR533b-5p3......_885
MIMAT0003389hsa-miR-542-3p8_......385
MIMAT0003179rno-miR-542-3p8_......385
MIMAT0003172mmu-miR-542-3p8_......385
MIMAT0003143ppt-miR156a6_......185
MIMAT0026598mml-miR-215-3p2_......785
MIMAT0001900ptc-miR156k6_......185
MIMAT0001899ptc-miR156j7_......285
MIMAT0001898ptc-miR156i7_......285
MIMAT0001897ptc-miR156h7_......285
MIMAT0001896ptc-miR156g7_......285
MIMAT0001895ptc-miR156f6_......185
MIMAT0001894ptc-miR156e6_......185
MIMAT0001893ptc-miR156d6_......185
MIMAT0001892ptc-miR156c6_......185
MIMAT0001891ptc-miR156b6_......185
MIMAT0001890ptc-miR156a6_......185
MIMAT0001758sbi-miR156e6_......185
MIMAT0001749zma-miR156k-5p6_......185
MIMAT0001710zma-miR156j-5p6_......185
MIMAT0001692gma-miR156b6_......185
MIMAT0001686gma-miR156a6_......185
MIMAT0001674gma-miR156c7_......285
MIMAT0001673gma-miR156e7_......285
MIMAT0001672gma-miR156d7_......285
MIMAT0001656sof-miR1566_......185
MIMAT0001654mtr-miR156a6_......185
MIMAT0001444sbi-miR156d6_......185
MIMAT0001400sbi-miR156b6_......185
MIMAT0001399sbi-miR156c6_......185
MIMAT0001398sbi-miR156a6_......185
MIMAT0001359zma-miR156i-5p6_......185
MIMAT0001358zma-miR156h-5p6_......185
MIMAT0001357zma-miR156a-5p6_......185
MIMAT0001356zma-miR156e-5p6_......185
MIMAT0001355zma-miR156c6_......185
MIMAT0001354zma-miR156b-5p6_......185
MIMAT0001353zma-miR156g-5p6_......185
MIMAT0001352zma-miR156f-5p6_......185
MIMAT0001351zma-miR156d-5p6_......185
MIMAT0026514gga-miR-215-3p2_......785
MIMAT0017171rno-miR-196b-3p8......_385
MIMAT0017170mmu-miR-196b-3p8......_385
MIMAT0009201hsa-miR-196b-3p8......_385
MIMAT0001020osa-miR156k6_......185
MIMAT0001013ath-miR156h6_......185
MIMAT0017169mmu-miR-215-3p2_......785
MIMAT0000627osa-miR156j-5p6_......185
MIMAT0000626osa-miR156i6_......185
MIMAT0031156osa-miR156h-5p6_......185
MIMAT0000624osa-miR156g-5p6_......185
MIMAT0000623osa-miR156f-5p6_......185
MIMAT0000622osa-miR156e6_......185
MIMAT0000621osa-miR156d6_......185
MIMAT0000620osa-miR156c-5p6_......185
MIMAT0000619osa-miR156b-5p6_......185
MIMAT0000618osa-miR156a6_......185
MIMAT0026476hsa-miR-215-3p2_......785
MIMAT0000175ath-miR157d6_......185
MIMAT0000174ath-miR157c-5p7_......285
MIMAT0000173ath-miR157b-5p7_......285
MIMAT0000172ath-miR157a-5p7_......285
MIMAT0000171ath-miR156f-5p6_......185
MIMAT0000170ath-miR156e6_......185
MIMAT0000169ath-miR156d-5p6_......185
MIMAT0000168ath-miR156c-5p6_......185
MIMAT0000167ath-miR156b-5p6_......185
MIMAT0000166ath-miR156a-5p6_......185