| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ggaagtg | 7 | ||
| MIMAT0034942 | efu-miR-9287 | 8 | ....... | 2 | 100 |
| MIMAT0028697 | mdo-miR-7343-3p | 8 | ....... | 2 | 100 |
| MIMAT0026328 | ccr-miR-2192 | 2 | ....... | 8 | 100 |
| MIMAT0008404 | hsv1-miR-H6-3p | 7 | ....... | 1 | 100 |
| MIMAT0017185 | mghv-miR-M1-1-5p | 2 | ....... | 8 | 100 |
| MIMAT0037211 | ata-miR395c-3p | 2 | _...... | 7 | 85 |
| MIMAT0037185 | ata-miR395f-3p | 2 | _...... | 7 | 85 |
| MIMAT0037165 | ata-miR395d-3p | 2 | _...... | 7 | 85 |
| MIMAT0037163 | ata-miR395a-3p | 2 | _...... | 7 | 85 |
| MIMAT0037117 | ata-miR395e-3p | 2 | _...... | 7 | 85 |
| MIMAT0036975 | bta-miR-3533 | 3 | _...... | 8 | 85 |
| MIMAT0035851 | bra-miR395a-3p | 3 | _...... | 8 | 85 |
| MIMAT0035849 | bra-miR395c-3p | 3 | _...... | 8 | 85 |
| MIMAT0035847 | bra-miR395b-3p | 3 | _...... | 8 | 85 |
| MIMAT0035845 | bra-miR395d-3p | 3 | _...... | 8 | 85 |
| MIMAT0035520 | bdi-miR395q | 2 | _...... | 7 | 85 |
| MIMAT0035427 | nve-miR-9468 | 1 | _...... | 6 | 85 |
| MIMAT0035184 | efu-miR-507a | 6 | _...... | 1 | 85 |
| MIMAT0034907 | efu-miR-9186p | 1 | _...... | 6 | 85 |
| MIMAT0034867 | efu-miR-9250 | 2 | _...... | 7 | 85 |
| MIMAT0034374 | cfa-miR-8874 | 6 | _...... | 1 | 85 |
| MIMAT0033937 | atr-miR395 | 3 | _...... | 8 | 85 |
| MIMAT0033532 | sma-miR-8414-5p | 6 | ......_ | 1 | 85 |
| MIMAT0032910 | ppc-miR-8364d-5p | 6 | _...... | 1 | 85 |
| MIMAT0032354 | ssa-miR-138-3-3p | 8 | ......_ | 3 | 85 |
| MIMAT0031821 | cpa-miR395e | 2 | _...... | 7 | 85 |
| MIMAT0031820 | cpa-miR395d | 2 | _...... | 7 | 85 |
| MIMAT0031819 | cpa-miR395c | 2 | _...... | 7 | 85 |
| MIMAT0031818 | cpa-miR395b | 2 | _...... | 7 | 85 |
| MIMAT0031817 | cpa-miR395a | 2 | _...... | 7 | 85 |
| MIMAT0031564 | ppe-miR8133-3p | 8 | ......_ | 3 | 85 |
| MIMAT0031492 | ppe-miR395n | 3 | _...... | 8 | 85 |
| MIMAT0031491 | ppe-miR395m | 3 | _...... | 8 | 85 |
| MIMAT0031490 | ppe-miR395l | 3 | _...... | 8 | 85 |
| MIMAT0031489 | ppe-miR395k | 3 | _...... | 8 | 85 |
| MIMAT0031488 | ppe-miR395j | 3 | _...... | 8 | 85 |
| MIMAT0031487 | ppe-miR395i | 3 | _...... | 8 | 85 |
| MIMAT0031486 | ppe-miR395h | 3 | _...... | 8 | 85 |
| MIMAT0031485 | ppe-miR395g | 3 | _...... | 8 | 85 |
| MIMAT0031484 | ppe-miR395f | 3 | _...... | 8 | 85 |
| MIMAT0031483 | ppe-miR395e | 3 | _...... | 8 | 85 |
| MIMAT0031482 | ppe-miR395d | 3 | _...... | 8 | 85 |
| MIMAT0031481 | ppe-miR395c | 3 | _...... | 8 | 85 |
| MIMAT0031480 | ppe-miR395b-3p | 3 | _...... | 8 | 85 |
| MIMAT0031478 | ppe-miR395a-3p | 3 | _...... | 8 | 85 |
| MIMAT0031348 | stu-miR156f-3p | 8 | _...... | 3 | 85 |
| MIMAT0031271 | stu-miR395j | 3 | _...... | 8 | 85 |
| MIMAT0031270 | stu-miR395i | 3 | _...... | 8 | 85 |
| MIMAT0031269 | stu-miR395h | 3 | _...... | 8 | 85 |
| MIMAT0031268 | stu-miR395g | 3 | _...... | 8 | 85 |
| MIMAT0031267 | stu-miR395f | 3 | _...... | 8 | 85 |
| MIMAT0031266 | stu-miR395e | 3 | _...... | 8 | 85 |
| MIMAT0031265 | stu-miR395d | 3 | _...... | 8 | 85 |
| MIMAT0031264 | stu-miR395c | 3 | _...... | 8 | 85 |
| MIMAT0031263 | stu-miR395b | 3 | _...... | 8 | 85 |
| MIMAT0031262 | stu-miR395a | 3 | _...... | 8 | 85 |
| MIMAT0030096 | bdi-miR395p-3p | 2 | _...... | 7 | 85 |
| MIMAT0030094 | bdi-miR395o-3p | 2 | _...... | 7 | 85 |
| MIMAT0029271 | mes-miR395d | 3 | _...... | 8 | 85 |
| MIMAT0029270 | mes-miR395c | 3 | _...... | 8 | 85 |
| MIMAT0029269 | mes-miR395b | 3 | _...... | 8 | 85 |
| MIMAT0029268 | mes-miR395a | 3 | _...... | 8 | 85 |
| MIMAT0026363 | bma-miR-5864 | 2 | _...... | 7 | 85 |
| MIMAT0026170 | cme-miR395c | 3 | _...... | 8 | 85 |
| MIMAT0026157 | cme-miR395b | 3 | _...... | 8 | 85 |
| MIMAT0026144 | cme-miR395f | 3 | _...... | 8 | 85 |
| MIMAT0026143 | cme-miR395d | 3 | _...... | 8 | 85 |
| MIMAT0026142 | cme-miR395e | 3 | _...... | 8 | 85 |
| MIMAT0026141 | cme-miR395a | 3 | _...... | 8 | 85 |
| MIMAT0025988 | mdm-miR395i | 3 | _...... | 8 | 85 |
| MIMAT0025987 | mdm-miR395h | 3 | _...... | 8 | 85 |
| MIMAT0025986 | mdm-miR395g | 3 | _...... | 8 | 85 |
| MIMAT0025985 | mdm-miR395f | 3 | _...... | 8 | 85 |
| MIMAT0025984 | mdm-miR395e | 3 | _...... | 8 | 85 |
| MIMAT0025983 | mdm-miR395d | 3 | _...... | 8 | 85 |
| MIMAT0025982 | mdm-miR395c | 3 | _...... | 8 | 85 |
| MIMAT0025981 | mdm-miR395b | 3 | _...... | 8 | 85 |
| MIMAT0025980 | mdm-miR395a | 3 | _...... | 8 | 85 |
| MIMAT0027735 | mmu-miR-6917-3p | 8 | _...... | 3 | 85 |
| MIMAT0027731 | mmu-miR-6915-3p | 8 | ......_ | 3 | 85 |
| MIMAT0025273 | ptc-miR395k | 3 | _...... | 8 | 85 |
| MIMAT0024945 | hme-miR-1b | 3 | ......_ | 8 | 85 |
| MIMAT0024925 | gma-miR395m | 3 | _...... | 8 | 85 |
| MIMAT0024924 | gma-miR395l | 3 | _...... | 8 | 85 |
| MIMAT0024923 | gma-miR395k | 3 | _...... | 8 | 85 |
| MIMAT0024922 | gma-miR395j | 3 | _...... | 8 | 85 |
| MIMAT0024921 | gma-miR395i | 3 | _...... | 8 | 85 |
| MIMAT0024920 | gma-miR395h | 3 | _...... | 8 | 85 |
| MIMAT0024707 | nta-miR395c | 3 | _...... | 8 | 85 |
