RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | ggccccgg | 8 | ||
MIMAT0026409 | sbi-miR6221-3p | 8 | ........ | 1 | 100 |
MIMAT0014693 | hsv1-miR-H15 | 1 | ........ | 8 | 100 |
MIMAT0036678 | oha-miR-128-5p | 7 | ......._ | 1 | 87 |
MIMAT0035933 | chi-miR-128-5p | 7 | ......._ | 1 | 87 |
MIMAT0032316 | ssa-miR-128-3-5p | 7 | ......._ | 1 | 87 |
MIMAT0032315 | ssa-miR-128-2-5p | 7 | ......._ | 1 | 87 |
MIMAT0032313 | ssa-miR-128-1-5p | 7 | ......._ | 1 | 87 |
MIMAT0028608 | mdo-miR-128b-5p | 7 | ......._ | 1 | 87 |
MIMAT0027590 | hsa-miR-6845-5p | 7 | ......._ | 1 | 87 |
MIMAT0027468 | hsa-miR-6784-5p | 8 | _....... | 2 | 87 |
MIMAT0027424 | hsa-miR-6762-5p | 7 | ......._ | 1 | 87 |
MIMAT0023749 | cgr-miR-128-5p | 7 | ......._ | 1 | 87 |
MIMAT0022290 | hsa-miR-5587-3p | 1 | _....... | 7 | 87 |
MIMAT0021082 | hsa-miR-5090 | 7 | _....... | 1 | 87 |
MIMAT0019807 | hsa-miR-4707-5p | 1 | _....... | 7 | 87 |
MIMAT0018760 | tca-miR-3852-5p | 8 | ......._ | 2 | 87 |
MIMAT0031084 | tgu-miR-128-1-5p | 7 | ......._ | 1 | 87 |
MIMAT0013848 | bta-miR-2890 | 1 | _....... | 7 | 87 |
MIMAT0007196 | oan-miR-1394 | 8 | _....... | 2 | 87 |
MIMAT0005395 | cre-miR1151b-5p | 8 | _....... | 2 | 87 |
MIMAT0005393 | cre-miR1151a-5p | 8 | _....... | 2 | 87 |
MIMAT0004824 | mmu-miR-673-3p | 8 | _....... | 2 | 87 |
MIMAT0026565 | mml-miR-128a-5p | 7 | ......._ | 1 | 87 |
MIMAT0031967 | dre-miR-128-5p | 7 | ......._ | 1 | 87 |
MIMAT0031096 | gga-miR-128-1-5p | 7 | ......._ | 1 | 87 |
MIMAT0017118 | rno-miR-128-1-5p | 7 | ......._ | 1 | 87 |
MIMAT0026477 | hsa-miR-128-1-5p | 7 | ......._ | 1 | 87 |
MIMAT0016982 | mmu-miR-128-1-5p | 7 | ......._ | 1 | 87 |
MIMAT0013847 | bta-miR-2889 | 1 | .t...... | 8 | 87 |
MIMAT0012598 | hsv1-miR-H8-3p | 1 | .c...... | 8 | 87 |
MIMAT0036922 | oha-miR-425-3p | 6 | _......_ | 1 | 75 |
MIMAT0036730 | oha-miR-146b-3p | 1 | _......_ | 6 | 75 |
MIMAT0036553 | tch-miR-486-3p | 6 | _......_ | 1 | 75 |
MIMAT0036296 | chi-miR-874-5p | 2 | ......__ | 7 | 75 |
MIMAT0035752 | rno-miR-762 | 7 | _......_ | 2 | 75 |
MIMAT0035228 | dme-miR-9382-3p | 3 | __...... | 8 | 75 |
MIMAT0034644 | eca-miR-744 | 8 | _......_ | 3 | 75 |
MIMAT0034600 | eca-miR-9056 | 7 | ......__ | 2 | 75 |
MIMAT0033987 | gra-miR8637 | 2 | ......__ | 7 | 75 |
MIMAT0033777 | pxy-miR-8532-5p | 6 | _......_ | 1 | 75 |
MIMAT0032317 | ssa-miR-128-4-5p | 7 | ......__ | 2 | 75 |
MIMAT0031374 | stu-miR384-3p | 8 | ......__ | 3 | 75 |
MIMAT0030644 | prd-miR-7927b-5p | 6 | _......_ | 1 | 75 |
MIMAT0030612 | prd-miR-7927d-5p | 6 | _......_ | 1 | 75 |
MIMAT0030610 | prd-miR-7927c-5p | 6 | _......_ | 1 | 75 |
MIMAT0030546 | prd-miR-7927a-5p | 6 | _......_ | 1 | 75 |
MIMAT0029547 | ipu-miR-7551 | 6 | ......__ | 1 | 75 |
MIMAT0028704 | mdo-miR-7346-5p | 6 | _......_ | 1 | 75 |
MIMAT0028529 | mdo-miR-7277-3p | 6 | _......_ | 1 | 75 |
MIMAT0028467 | mdo-miR-7250-3p | 2 | ......__ | 7 | 75 |
MIMAT0028320 | mml-miR-7184-5p | 7 | ......__ | 2 | 75 |
MIMAT0028275 | mml-miR-7170-3p | 7 | ......__ | 2 | 75 |
MIMAT0028072 | mmu-miR-7083-5p | 7 | _......_ | 2 | 75 |
MIMAT0028022 | mmu-miR-7059-5p | 7 | __...... | 2 | 75 |
MIMAT0028000 | mmu-miR-7048-5p | 6 | _......_ | 1 | 75 |
MIMAT0027911 | mmu-miR-7003-3p | 1 | __...... | 6 | 75 |
MIMAT0027867 | mmu-miR-6982-3p | 2 | ......__ | 7 | 75 |
MIMAT0027582 | hsa-miR-6840-5p | 3 | __...... | 8 | 75 |
MIMAT0027450 | hsa-miR-6775-5p | 7 | _......_ | 2 | 75 |
MIMAT0027427 | hsa-miR-6763-3p | 3 | __...... | 8 | 75 |
MIMAT0027355 | hsa-miR-6727-5p | 8 | _......_ | 3 | 75 |
MIMAT0025310 | prv-miR-LLT7 | 6 | __...... | 1 | 75 |
MIMAT0025147 | mmu-miR-6396 | 6 | ......__ | 1 | 75 |
MIMAT0024002 | cgr-miR-744-5p | 8 | _......_ | 3 | 75 |
MIMAT0023968 | cgr-miR-486-3p | 6 | _......_ | 1 | 75 |
MIMAT0021776 | aca-miR-146a-3p | 1 | _......_ | 6 | 75 |
MIMAT0021732 | aca-miR-128-5p | 7 | ......__ | 2 | 75 |
MIMAT0020498 | bfl-miR-4903 | 3 | __...... | 8 | 75 |
MIMAT0020115 | bfl-miR-4872b | 8 | __...... | 3 | 75 |
MIMAT0019947 | hsa-miR-4783-3p | 1 | __...... | 6 | 75 |
MIMAT0019721 | hsa-miR-4655-5p | 8 | __...... | 3 | 75 |
MIMAT0019574 | pma-miR-4544-3p | 7 | __...... | 2 | 75 |
MIMAT0019071 | hsa-miR-4532 | 1 | __...... | 6 | 75 |
MIMAT0019071 | hsa-miR-4532 | 8 | __...... | 3 | 75 |
MIMAT0019045 | hsa-miR-4508 | 7 | _......_ | 2 | 75 |
MIMAT0016595 | cin-miR-4053-5p | 8 | __...... | 3 | 75 |
MIMAT0016102 | ppy-miR-744 | 8 | _......_ | 3 | 75 |
MIMAT0015809 | ppy-miR-296-5p | 3 | ......__ | 8 | 75 |
MIMAT0015708 | ssc-miR-744 | 8 | _......_ | 3 | 75 |
MIMAT0015080 | hsa-miR-3196 | 6 | _......_ | 1 | 75 |
MIMAT0014944 | mmu-miR-486b-3p | 6 | _......_ | 1 | 75 |
MIMAT0014549 | tgu-miR-2992 | 1 | __...... | 6 | 75 |
MIMAT0026977 | tgu-miR-128-2-5p | 7 | ......__ | 2 | 75 |
MIMAT0013803 | mmu-miR-2861 | 6 | ......__ | 1 | 75 |
MIMAT0013802 | hsa-miR-2861 | 6 | ......__ | 1 | 75 |
MIMAT0013187 | eca-miR-486-3p | 6 | _......_ | 1 | 75 |
MIMAT0012600 | bmo-miR-2724 | 3 | __...... | 8 | 75 |
MIMAT0012207 | dme-miR-2496-3p | 7 | _......_ | 2 | 75 |
MIMAT0012171 | hbv-miR-B4 | 7 | _......_ | 2 | 75 |
MIMAT0012170 | hbv-miR-B2RC | 3 | ......__ | 8 | 75 |
MIMAT0011808 | bta-miR-2299-3p | 7 | __...... | 2 | 75 |
MIMAT0009369 | bta-miR-744 | 8 | _......_ | 3 | 75 |
MIMAT0008317 | ptr-miR-744 | 8 | _......_ | 3 | 75 |
MIMAT0032036 | cfa-miR-486-3p | 7 | _......_ | 2 | 75 |
MIMAT0026910 | mml-miR-874-5p | 2 | ......__ | 7 | 75 |
MIMAT0006345 | mml-miR-486-3p | 6 | _......_ | 1 | 75 |
MIMAT0006251 | mml-miR-296-5p | 3 | ......__ | 8 | 75 |
MIMAT0026814 | mml-miR-128b-5p | 7 | ......__ | 2 | 75 |
MIMAT0007613 | gga-miR-1716 | 8 | _......_ | 3 | 75 |
MIMAT0007459 | gga-miR-1595-3p | 3 | _......_ | 8 | 75 |
MIMAT0007078 | oan-miR-1421p-5p | 8 | ......__ | 3 | 75 |
MIMAT0022721 | hsa-miR-1247-3p | 1 | __...... | 6 | 75 |
MIMAT0005581 | mml-miR-1227 | 8 | ......__ | 3 | 75 |
MIMAT0022941 | hsa-miR-1227-5p | 8 | ......__ | 3 | 75 |
MIMAT0005382 | cre-miR1145.1 | 8 | ......__ | 3 | 75 |
MIMAT0017290 | rno-miR-874-5p | 2 | ......__ | 7 | 75 |
MIMAT0004945 | hsa-miR-744-5p | 8 | _......_ | 3 | 75 |
MIMAT0026718 | hsa-miR-874-5p | 2 | ......__ | 7 | 75 |
MIMAT0017268 | mmu-miR-874-5p | 2 | ......__ | 7 | 75 |
MIMAT0026662 | mdo-miR-128a-5p | 7 | ......__ | 2 | 75 |
MIMAT0017238 | mmu-miR-665-5p | 7 | ......__ | 2 | 75 |
MIMAT0004187 | mmu-miR-744-5p | 8 | _......_ | 3 | 75 |
MIMAT0017206 | mmu-miR-486a-3p | 6 | _......_ | 1 | 75 |
MIMAT0004762 | hsa-miR-486-3p | 6 | _......_ | 1 | 75 |
MIMAT0026506 | gga-miR-128-2-5p | 7 | ......__ | 2 | 75 |
MIMAT0000898 | rno-miR-296-5p | 3 | ......__ | 8 | 75 |
MIMAT0017119 | rno-miR-128-2-5p | 7 | ......__ | 2 | 75 |
MIMAT0000690 | hsa-miR-296-5p | 3 | ......__ | 8 | 75 |
MIMAT0031095 | hsa-miR-128-2-5p | 7 | ......__ | 2 | 75 |
MIMAT0017069 | mmu-miR-128-2-5p | 7 | ......__ | 2 | 75 |
MIMAT0000374 | mmu-miR-296-5p | 3 | ......__ | 8 | 75 |