Result for your query miRNA sequence
>rhcmv-miR-rh96-3
gggccaa

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gggccaa7
MIMAT0032979ppc-miR-8255-3p7.......1100
MIMAT0030177bdi-miR7724b-3p7.......1100
MIMAT0030175bdi-miR7724a-3p7.......1100
MIMAT0028479mdo-miR-7256-3p2.......8100
MIMAT0013972bhv1-miR-B97.......1100
MIMAT0012010bta-miR-2284r7.......1100
MIMAT0036996tae-miR9653b2_......785
MIMAT0035116efu-miR-93466_......185
MIMAT0034322cfa-miR-88296_......185
MIMAT0033279ppc-miR-8358-3p7_......285
MIMAT0033099ppc-miR-8293-5p3_......885
MIMAT0031258stu-miR171c-5p8_......385
MIMAT0031256stu-miR171a-5p8_......385
MIMAT0030173bdi-miR7723a-3p3......_885
MIMAT0028661mdo-miR-7329-3p2_......785
MIMAT0028467mdo-miR-7250-3p6......_185
MIMAT0028320mml-miR-7184-5p3......_885
MIMAT0028221hsa-miR-7155-3p6......_185
MIMAT0028060mmu-miR-7077-5p1_......685
MIMAT0027973mmu-miR-7034-3p6_......185
MIMAT0027867mmu-miR-6982-3p6......_185
MIMAT0027690hsa-miR-6895-5p3......_885
MIMAT0027603hsa-miR-6851-3p6......_185
MIMAT0027590hsa-miR-6845-5p3......_885
MIMAT0027424hsa-miR-6762-5p3......_885
MIMAT0024827hvu-miR62007_......285
MIMAT0027250pgi-miR6135i8_......385
MIMAT0022075aca-miR-5452-5p6......_185
MIMAT0021623gma-miR171j-5p8_......385
MIMAT0020214dme-miR-4981-3p6_......185
MIMAT0019879hsa-miR-4745-3p6......_185
MIMAT0019798hsa-miR-4701-5p6_......185
MIMAT0019641pma-miR-46071......_685
MIMAT0018201hsa-miR-39262_......785
MIMAT0018691tca-miR-3830-3p6_......185
MIMAT0016213ppy-miR-12916......_185
MIMAT0016093ppy-miR-663b8......_385
MIMAT0016030ppy-miR-5886_......185
MIMAT0016016ppy-miR-5751......_685
MIMAT0017786esi-miR3456-3p6_......185
MIMAT0017681aly-miR402-5p6_......185
MIMAT0017515aly-miR171a-5p8_......385
MIMAT0017513aly-miR170-5p8_......385
MIMAT0015069hsa-miR-3187-3p6_......185
MIMAT0019203hsa-miR-3136-3p6......_185
MIMAT0014987hsa-miR-548s3_......885
MIMAT0014950mmu-miR-3109-3p3......_885
MIMAT0012968eca-miR-1291a6......_185
MIMAT0011957bta-miR-2284q1_......685
MIMAT0011811bta-miR-2284s6......_185
MIMAT0009956bta-miR-12916......_185
MIMAT0008310ptr-miR-663b8......_385
MIMAT0008260ptr-miR-5886_......185
MIMAT0008009ptr-miR-12916......_185
MIMAT0007767osa-miR1847.26......_185
MIMAT0020360cel-miR-1824-3p7_......285
MIMAT0007212oan-miR-1405-5p2_......785
MIMAT0007208oan-miR-1401-3p2_......785
MIMAT0005881hsa-miR-12916......_185
MIMAT0005867hsa-miR-663b8......_385
MIMAT0011068mtr-miR166d3......_885
MIMAT0004834ppt-miR1221-3p6......_185
MIMAT0003255hsa-miR-5886_......185
MIMAT0022878osa-miR171d-5p8_......385
MIMAT0031888ath-miR171a-5p8_......385
MIMAT0031887ath-miR170-5p8_......385