RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | ggtagagt | 8 | ||
MIMAT0008401 | hsv1-miR-H4-5p | 1 | ........ | 8 | 100 |
MIMAT0024362 | ppy-miR-4451 | 2 | ......._ | 8 | 87 |
MIMAT0023473 | hco-miR-5966 | 8 | ......._ | 2 | 87 |
MIMAT0018973 | hsa-miR-4451 | 2 | ......._ | 8 | 87 |
MIMAT0003781 | mmu-miR-676-5p | 7 | _....... | 1 | 87 |
MIMAT0028700 | mdo-miR-1251-5p | 8 | .c...... | 1 | 87 |
MIMAT0028242 | mml-miR-1251-5p | 8 | .c...... | 1 | 87 |
MIMAT0016176 | ppy-miR-1251 | 8 | .c...... | 1 | 87 |
MIMAT0014824 | mmu-miR-1251-5p | 8 | .c...... | 1 | 87 |
MIMAT0009963 | bta-miR-1251 | 8 | .c...... | 1 | 87 |
MIMAT0007977 | ptr-miR-1251 | 8 | .c...... | 1 | 87 |
MIMAT0005903 | hsa-miR-1251-5p | 8 | .c...... | 1 | 87 |
MIMAT0012114 | sme-miR-125b-3p | 1 | ......t. | 8 | 87 |
MIMAT0003197 | rno-miR-376a-5p | 1 | ......t. | 8 | 87 |
MIMAT0022928 | hsa-miR-376a-2-5p | 1 | ......t. | 8 | 87 |
MIMAT0003387 | mmu-miR-376a-5p | 1 | ......t. | 8 | 87 |
MIMAT0036300 | chi-miR-877-5p | 1 | _......_ | 6 | 75 |
MIMAT0036195 | chi-miR-379-5p | 2 | ......__ | 7 | 75 |
MIMAT0036008 | chi-miR-1839 | 3 | ......__ | 8 | 75 |
MIMAT0035261 | gsa-let-7-3p | 6 | _......_ | 1 | 75 |
MIMAT0035032 | efu-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0035025 | efu-miR-1193 | 3 | ......__ | 8 | 75 |
MIMAT0033227 | ppc-miR-8341-5p | 1 | _......_ | 6 | 75 |
MIMAT0033190 | ppc-miR-8323-5p | 2 | ......__ | 7 | 75 |
MIMAT0032804 | cel-miR-8195-3p | 1 | _......_ | 6 | 75 |
MIMAT0031688 | bbe-miR-4865-3p | 3 | _......_ | 8 | 75 |
MIMAT0031681 | bbe-miR-4860-3p | 2 | _......_ | 7 | 75 |
MIMAT0030927 | stu-miR8026 | 3 | _......_ | 8 | 75 |
MIMAT0030897 | stu-miR8005c | 3 | __...... | 8 | 75 |
MIMAT0030896 | stu-miR8005b-3p | 3 | __...... | 8 | 75 |
MIMAT0031191 | stu-miR8005b-5p | 6 | __...... | 1 | 75 |
MIMAT0030895 | stu-miR8005a | 3 | __...... | 8 | 75 |
MIMAT0029622 | crm-miR-7605 | 6 | ......__ | 1 | 75 |
MIMAT0028924 | mdo-miR-7398s-5p | 2 | _......_ | 7 | 75 |
MIMAT0031091 | mdo-miR-7331-2-3p | 8 | _......_ | 3 | 75 |
MIMAT0028367 | mml-miR-7201-3p | 8 | ......__ | 3 | 75 |
MIMAT0026406 | sbi-miR437x-5p | 1 | __...... | 6 | 75 |
MIMAT0028134 | mmu-miR-7118-3p | 8 | __...... | 3 | 75 |
MIMAT0028100 | ddi-miR-7097 | 8 | _......_ | 3 | 75 |
MIMAT0028037 | mmu-miR-7066-3p | 6 | ......__ | 1 | 75 |
MIMAT0027849 | mmu-miR-6973a-3p | 7 | __...... | 2 | 75 |
MIMAT0027727 | mmu-miR-6913-3p | 7 | _......_ | 2 | 75 |
MIMAT0027564 | hsa-miR-6832-5p | 2 | _......_ | 7 | 75 |
MIMAT0027562 | hsa-miR-6831-5p | 3 | ......__ | 8 | 75 |
MIMAT0025051 | rno-miR-3102 | 6 | _......_ | 1 | 75 |
MIMAT0024843 | rno-miR-1839-5p | 3 | ......__ | 8 | 75 |
MIMAT0024760 | nta-miR6157 | 2 | ......__ | 7 | 75 |
MIMAT0024350 | mml-miR-3927 | 3 | ......__ | 8 | 75 |
MIMAT0024306 | ggo-miR-3927 | 3 | ......__ | 8 | 75 |
MIMAT0024155 | ggo-miR-877 | 1 | _......_ | 6 | 75 |
MIMAT0024110 | ggo-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0024058 | ptr-miR-3132 | 3 | ......__ | 8 | 75 |
MIMAT0023945 | cgr-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0023807 | cgr-miR-1839-5p | 3 | ......__ | 8 | 75 |
MIMAT0023011 | bra-miR5714 | 8 | __...... | 3 | 75 |
MIMAT0022473 | hsa-miR-5684 | 7 | __...... | 2 | 75 |
MIMAT0022420 | ath-miR781b | 2 | __...... | 7 | 75 |
MIMAT0022052 | aca-miR-5431 | 3 | ......__ | 8 | 75 |
MIMAT0022046 | aca-miR-5426-5p | 7 | __...... | 2 | 75 |
MIMAT0020616 | mmu-miR-5108 | 1 | _......_ | 6 | 75 |
MIMAT0021035 | hsa-miR-5007-5p | 1 | __...... | 6 | 75 |
MIMAT0020100 | bfl-miR-4865-3p | 2 | _......_ | 7 | 75 |
MIMAT0020089 | bfl-miR-4860-3p | 2 | _......_ | 7 | 75 |
MIMAT0019855 | hsa-miR-4732-5p | 2 | _......_ | 7 | 75 |
MIMAT0019828 | hsa-miR-3529-5p | 2 | ......__ | 7 | 75 |
MIMAT0019769 | hsa-miR-4684-5p | 8 | _......_ | 3 | 75 |
MIMAT0019714 | hsa-miR-4650-3p | 2 | ......__ | 7 | 75 |
MIMAT0019247 | oar-miR-379-5p | 2 | ......__ | 7 | 75 |
MIMAT0018449 | csi-miR3946 | 3 | _......_ | 8 | 75 |
MIMAT0018285 | gma-miR4379 | 1 | __...... | 6 | 75 |
MIMAT0018202 | hsa-miR-3927-3p | 3 | ......__ | 8 | 75 |
MIMAT0016117 | ppy-miR-877 | 1 | _......_ | 6 | 75 |
MIMAT0016060 | ppy-miR-618 | 8 | __...... | 3 | 75 |
MIMAT0015869 | ppy-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0017597 | aly-miR781-5p | 2 | __...... | 7 | 75 |
MIMAT0014997 | hsa-miR-3132 | 3 | ......__ | 8 | 75 |
MIMAT0014935 | mmu-miR-3102-3p.2-3p | 6 | _......_ | 1 | 75 |
MIMAT0013952 | ssc-miR-1839-5p | 3 | ......__ | 8 | 75 |
MIMAT0013147 | eca-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0013071 | eca-miR-1461 | 8 | _......_ | 3 | 75 |
MIMAT0012893 | eca-miR-1839 | 3 | ......__ | 8 | 75 |
MIMAT0015298 | bmo-miR-993a-5p | 6 | ......__ | 1 | 75 |
MIMAT0009968 | bta-miR-1839 | 3 | ......__ | 8 | 75 |
MIMAT0009456 | mmu-miR-1839-5p | 3 | ......__ | 8 | 75 |
MIMAT0009381 | bta-miR-877 | 1 | _......_ | 6 | 75 |
MIMAT0009306 | bta-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0008932 | dvi-miR-282-5p | 6 | _......_ | 1 | 75 |
MIMAT0008280 | ptr-miR-618 | 8 | __...... | 3 | 75 |
MIMAT0008131 | ptr-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0006715 | cfa-miR-379 | 2 | ......__ | 7 | 75 |
MIMAT0006677 | cfa-miR-1839 | 3 | ......__ | 8 | 75 |
MIMAT0006521 | mml-miR-877-5p | 1 | _......_ | 6 | 75 |
MIMAT0006468 | mml-miR-618 | 8 | __...... | 3 | 75 |
MIMAT0006308 | mml-miR-379-5p | 2 | ......__ | 7 | 75 |
MIMAT0026841 | mml-miR-197-5p | 3 | ......__ | 8 | 75 |
MIMAT0007339 | gga-miR-216c | 8 | _......_ | 3 | 75 |
MIMAT0007031 | oan-miR-1367-5p | 3 | ......__ | 8 | 75 |
MIMAT0006933 | oan-miR-1348 | 3 | ......__ | 8 | 75 |
MIMAT0017329 | mmu-miR-1193-5p | 2 | ......__ | 7 | 75 |
MIMAT0005285 | rno-miR-877 | 1 | _......_ | 6 | 75 |
MIMAT0005171 | ppt-miR1053-3p | 6 | _......_ | 1 | 75 |
MIMAT0005101 | ppt-miR1223j | 3 | _......_ | 8 | 75 |
MIMAT0005100 | ppt-miR1223i | 3 | _......_ | 8 | 75 |
MIMAT0005099 | ppt-miR1223h | 3 | _......_ | 8 | 75 |
MIMAT0005098 | ppt-miR1223g | 3 | _......_ | 8 | 75 |
MIMAT0005097 | ppt-miR1223f | 3 | _......_ | 8 | 75 |
MIMAT0005096 | ppt-miR1223e | 3 | _......_ | 8 | 75 |
MIMAT0005095 | ppt-miR1223d | 3 | _......_ | 8 | 75 |
MIMAT0005094 | ppt-miR1223c | 3 | _......_ | 8 | 75 |
MIMAT0005093 | ppt-miR1223b | 3 | _......_ | 8 | 75 |
MIMAT0020906 | dme-miR-1012-5p | 3 | ......__ | 8 | 75 |
MIMAT0004949 | hsa-miR-877-5p | 1 | _......_ | 6 | 75 |
MIMAT0004861 | mmu-miR-877-5p | 1 | _......_ | 6 | 75 |
MIMAT0003940 | ath-miR781a | 2 | __...... | 7 | 75 |
MIMAT0003918 | ppt-miR1223a | 3 | _......_ | 8 | 75 |
MIMAT0003287 | hsa-miR-618 | 8 | __...... | 3 | 75 |
MIMAT0003192 | rno-miR-379-5p | 2 | ......__ | 7 | 75 |
MIMAT0031928 | dre-miR-430b-5p | 8 | __...... | 3 | 75 |
MIMAT0000743 | mmu-miR-379-5p | 2 | ......__ | 7 | 75 |
MIMAT0000733 | hsa-miR-379-5p | 2 | ......__ | 7 | 75 |
MIMAT0022691 | hsa-miR-197-5p | 3 | ......__ | 8 | 75 |