Result for your query miRNA sequence
>hsv1-miR-h4-5p
gguagagu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ggtagagt8
MIMAT0008401hsv1-miR-H4-5p1........8100
MIMAT0024362ppy-miR-44512......._887
MIMAT0023473hco-miR-59668......._287
MIMAT0018973hsa-miR-44512......._887
MIMAT0003781mmu-miR-676-5p7_.......187
MIMAT0028700mdo-miR-1251-5p8.c......187
MIMAT0028242mml-miR-1251-5p8.c......187
MIMAT0016176ppy-miR-12518.c......187
MIMAT0014824mmu-miR-1251-5p8.c......187
MIMAT0009963bta-miR-12518.c......187
MIMAT0007977ptr-miR-12518.c......187
MIMAT0005903hsa-miR-1251-5p8.c......187
MIMAT0012114sme-miR-125b-3p1......t.887
MIMAT0003197rno-miR-376a-5p1......t.887
MIMAT0022928hsa-miR-376a-2-5p1......t.887
MIMAT0003387mmu-miR-376a-5p1......t.887
MIMAT0036300chi-miR-877-5p1_......_675
MIMAT0036195chi-miR-379-5p2......__775
MIMAT0036008chi-miR-18393......__875
MIMAT0035261gsa-let-7-3p6_......_175
MIMAT0035032efu-miR-3792......__775
MIMAT0035025efu-miR-11933......__875
MIMAT0033227ppc-miR-8341-5p1_......_675
MIMAT0033190ppc-miR-8323-5p2......__775
MIMAT0032804cel-miR-8195-3p1_......_675
MIMAT0031688bbe-miR-4865-3p3_......_875
MIMAT0031681bbe-miR-4860-3p2_......_775
MIMAT0030927stu-miR80263_......_875
MIMAT0030897stu-miR8005c3__......875
MIMAT0030896stu-miR8005b-3p3__......875
MIMAT0031191stu-miR8005b-5p6__......175
MIMAT0030895stu-miR8005a3__......875
MIMAT0029622crm-miR-76056......__175
MIMAT0028924mdo-miR-7398s-5p2_......_775
MIMAT0031091mdo-miR-7331-2-3p8_......_375
MIMAT0028367mml-miR-7201-3p8......__375
MIMAT0026406sbi-miR437x-5p1__......675
MIMAT0028134mmu-miR-7118-3p8__......375
MIMAT0028100ddi-miR-70978_......_375
MIMAT0028037mmu-miR-7066-3p6......__175
MIMAT0027849mmu-miR-6973a-3p7__......275
MIMAT0027727mmu-miR-6913-3p7_......_275
MIMAT0027564hsa-miR-6832-5p2_......_775
MIMAT0027562hsa-miR-6831-5p3......__875
MIMAT0025051rno-miR-31026_......_175
MIMAT0024843rno-miR-1839-5p3......__875
MIMAT0024760nta-miR61572......__775
MIMAT0024350mml-miR-39273......__875
MIMAT0024306ggo-miR-39273......__875
MIMAT0024155ggo-miR-8771_......_675
MIMAT0024110ggo-miR-3792......__775
MIMAT0024058ptr-miR-31323......__875
MIMAT0023945cgr-miR-3792......__775
MIMAT0023807cgr-miR-1839-5p3......__875
MIMAT0023011bra-miR57148__......375
MIMAT0022473hsa-miR-56847__......275
MIMAT0022420ath-miR781b2__......775
MIMAT0022052aca-miR-54313......__875
MIMAT0022046aca-miR-5426-5p7__......275
MIMAT0020616mmu-miR-51081_......_675
MIMAT0021035hsa-miR-5007-5p1__......675
MIMAT0020100bfl-miR-4865-3p2_......_775
MIMAT0020089bfl-miR-4860-3p2_......_775
MIMAT0019855hsa-miR-4732-5p2_......_775
MIMAT0019828hsa-miR-3529-5p2......__775
MIMAT0019769hsa-miR-4684-5p8_......_375
MIMAT0019714hsa-miR-4650-3p2......__775
MIMAT0019247oar-miR-379-5p2......__775
MIMAT0018449csi-miR39463_......_875
MIMAT0018285gma-miR43791__......675
MIMAT0018202hsa-miR-3927-3p3......__875
MIMAT0016117ppy-miR-8771_......_675
MIMAT0016060ppy-miR-6188__......375
MIMAT0015869ppy-miR-3792......__775
MIMAT0017597aly-miR781-5p2__......775
MIMAT0014997hsa-miR-31323......__875
MIMAT0014935mmu-miR-3102-3p.2-3p6_......_175
MIMAT0013952ssc-miR-1839-5p3......__875
MIMAT0013147eca-miR-3792......__775
MIMAT0013071eca-miR-14618_......_375
MIMAT0012893eca-miR-18393......__875
MIMAT0015298bmo-miR-993a-5p6......__175
MIMAT0009968bta-miR-18393......__875
MIMAT0009456mmu-miR-1839-5p3......__875
MIMAT0009381bta-miR-8771_......_675
MIMAT0009306bta-miR-3792......__775
MIMAT0008932dvi-miR-282-5p6_......_175
MIMAT0008280ptr-miR-6188__......375
MIMAT0008131ptr-miR-3792......__775
MIMAT0006715cfa-miR-3792......__775
MIMAT0006677cfa-miR-18393......__875
MIMAT0006521mml-miR-877-5p1_......_675
MIMAT0006468mml-miR-6188__......375
MIMAT0006308mml-miR-379-5p2......__775
MIMAT0026841mml-miR-197-5p3......__875
MIMAT0007339gga-miR-216c8_......_375
MIMAT0007031oan-miR-1367-5p3......__875
MIMAT0006933oan-miR-13483......__875
MIMAT0017329mmu-miR-1193-5p2......__775
MIMAT0005285rno-miR-8771_......_675
MIMAT0005171ppt-miR1053-3p6_......_175
MIMAT0005101ppt-miR1223j3_......_875
MIMAT0005100ppt-miR1223i3_......_875
MIMAT0005099ppt-miR1223h3_......_875
MIMAT0005098ppt-miR1223g3_......_875
MIMAT0005097ppt-miR1223f3_......_875
MIMAT0005096ppt-miR1223e3_......_875
MIMAT0005095ppt-miR1223d3_......_875
MIMAT0005094ppt-miR1223c3_......_875
MIMAT0005093ppt-miR1223b3_......_875
MIMAT0020906dme-miR-1012-5p3......__875
MIMAT0004949hsa-miR-877-5p1_......_675
MIMAT0004861mmu-miR-877-5p1_......_675
MIMAT0003940ath-miR781a2__......775
MIMAT0003918ppt-miR1223a3_......_875
MIMAT0003287hsa-miR-6188__......375
MIMAT0003192rno-miR-379-5p2......__775
MIMAT0031928dre-miR-430b-5p8__......375
MIMAT0000743mmu-miR-379-5p2......__775
MIMAT0000733hsa-miR-379-5p2......__775
MIMAT0022691hsa-miR-197-5p3......__875