| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gtagttg | 7 | ||
| MIMAT0030261 | bdi-miR7757-3p.1 | 2 | ....... | 8 | 100 |
| MIMAT0028279 | mml-miR-4703-3p | 1 | ....... | 7 | 100 |
| MIMAT0022396 | ath-miR5636 | 2 | ....... | 8 | 100 |
| MIMAT0019802 | hsa-miR-4703-3p | 2 | ....... | 8 | 100 |
| MIMAT0036928 | oha-miR-449c-3p | 7 | _...... | 2 | 85 |
| MIMAT0035383 | nve-miR-9424a | 3 | _...... | 8 | 85 |
| MIMAT0033674 | sma-miR-8476-3p | 1 | _...... | 6 | 85 |
| MIMAT0033534 | sma-miR-8415-5p | 1 | _...... | 6 | 85 |
| MIMAT0033033 | ppc-miR-8270-3p | 8 | ......_ | 3 | 85 |
| MIMAT0032806 | cel-miR-8196a-3p | 1 | ......_ | 6 | 85 |
| MIMAT0032782 | ath-miR8183 | 3 | _...... | 8 | 85 |
| MIMAT0031672 | bbe-miR-34b-3p | 8 | _...... | 3 | 85 |
| MIMAT0030205 | bdi-miR7717c-3p | 2 | _...... | 7 | 85 |
| MIMAT0029912 | mml-miR-5697-5p | 3 | ......_ | 8 | 85 |
| MIMAT0029820 | mmu-miR-7657-5p | 3 | _...... | 8 | 85 |
| MIMAT0029796 | mmu-miR-7647-5p | 6 | ......_ | 1 | 85 |
| MIMAT0028345 | mml-miR-549b-3p | 8 | _...... | 3 | 85 |
| MIMAT0028291 | mml-miR-7175-3p | 8 | _...... | 3 | 85 |
| MIMAT0028104 | ddi-miR-7101 | 2 | _...... | 7 | 85 |
| MIMAT0022015 | aca-miR-449c-3p | 7 | _...... | 2 | 85 |
| MIMAT0018829 | tca-miR-3868-3p | 8 | _...... | 3 | 85 |
| MIMAT0016667 | cin-miR-4090-3p | 3 | ......_ | 8 | 85 |
| MIMAT0016169 | ppy-miR-1244 | 3 | ......_ | 8 | 85 |
| MIMAT0016946 | rlcv-miR-rL1-23-3p | 2 | _...... | 7 | 85 |
| MIMAT0017383 | ssc-miR-708-3p | 6 | _...... | 1 | 85 |
| MIMAT0013799 | bmo-miR-2859 | 6 | _...... | 1 | 85 |
| MIMAT0026952 | mml-miR-708-3p | 6 | _...... | 1 | 85 |
| MIMAT0012514 | dsi-miR-982b | 6 | ......_ | 1 | 85 |
| MIMAT0012190 | bdi-miR1127 | 6 | ......_ | 1 | 85 |
| MIMAT0012074 | bta-miR-2482 | 1 | ......_ | 6 | 85 |
| MIMAT0011455 | cel-miR-2218a-5p | 8 | ......_ | 3 | 85 |
| MIMAT0010131 | ebv-miR-BART21-3p | 2 | _...... | 7 | 85 |
| MIMAT0010002 | bfl-miR-34b-3p | 8 | _...... | 3 | 85 |
| MIMAT0009421 | mmu-miR-669o-5p | 1 | _...... | 6 | 85 |
| MIMAT0007970 | ptr-miR-1244 | 3 | ......_ | 8 | 85 |
| MIMAT0007511 | gga-miR-1638 | 1 | ......_ | 6 | 85 |
| MIMAT0005896 | hsa-miR-1244 | 3 | ......_ | 8 | 85 |
| MIMAT0005332 | rno-miR-708-3p | 6 | _...... | 1 | 85 |
| MIMAT0004927 | hsa-miR-708-3p | 6 | _...... | 1 | 85 |
| MIMAT0003997 | sme-miR-125a-3p | 1 | ......_ | 6 | 85 |
| MIMAT0003498 | mmu-miR-708-3p | 6 | _...... | 1 | 85 |
| MIMAT0003479 | mmu-miR-669c-5p | 2 | _...... | 7 | 85 |
