RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gtcacaca | 8 | ||
MIMAT0028199 | dev-miR-D22-3p | 1 | ........ | 8 | 100 |
MIMAT0034580 | eca-miR-9038 | 1 | _....... | 7 | 87 |
MIMAT0031195 | stu-miR8011a-5p | 8 | _....... | 2 | 87 |
MIMAT0032225 | lva-miR-2004-3p | 1 | _....... | 7 | 87 |
MIMAT0032177 | pmi-miR-2004-3p | 1 | _....... | 7 | 87 |
MIMAT0028932 | mdo-miR-7398h-5p | 7 | _....... | 1 | 87 |
MIMAT0027536 | hsa-miR-6818-5p | 8 | _....... | 2 | 87 |
MIMAT0027517 | hsa-miR-6808-3p | 7 | ......._ | 1 | 87 |
MIMAT0024201 | ggo-miR-377 | 2 | _....... | 8 | 87 |
MIMAT0019322 | oar-miR-377-3p | 2 | _....... | 8 | 87 |
MIMAT0018140 | pab-miR3708 | 1 | _....... | 7 | 87 |
MIMAT0016708 | cin-miR-4117-5p | 7 | _....... | 1 | 87 |
MIMAT0016695 | cin-miR-4108-5p | 7 | _....... | 1 | 87 |
MIMAT0015867 | ppy-miR-377 | 2 | _....... | 8 | 87 |
MIMAT0013146 | eca-miR-377 | 2 | _....... | 8 | 87 |
MIMAT0013749 | bmo-miR-2835 | 1 | _....... | 7 | 87 |
MIMAT0011310 | dre-miR-2188-3p | 8 | _....... | 2 | 87 |
MIMAT0009745 | spu-miR-2004 | 1 | _....... | 7 | 87 |
MIMAT0009304 | bta-miR-377 | 2 | _....... | 8 | 87 |
MIMAT0008129 | ptr-miR-377 | 2 | _....... | 8 | 87 |
MIMAT0006306 | mml-miR-377-3p | 2 | _....... | 8 | 87 |
MIMAT0007719 | gga-miR-122b | 8 | ......._ | 2 | 87 |
MIMAT0000741 | mmu-miR-377-3p | 2 | _....... | 8 | 87 |
MIMAT0000730 | hsa-miR-377-3p | 2 | _....... | 8 | 87 |
MIMAT0036292 | chi-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0033814 | pxy-miR-274 | 8 | ......a. | 1 | 87 |
MIMAT0033766 | pxy-miR-8524-3p | 8 | ......t. | 1 | 87 |
MIMAT0033359 | str-miR-7880k-3p | 8 | ......a. | 1 | 87 |
MIMAT0027707 | mmu-miR-6903-3p | 8 | .a...... | 1 | 87 |
MIMAT0023681 | ame-miR-6057 | 8 | ......a. | 1 | 87 |
MIMAT0020517 | ath-miR5013 | 8 | ......a. | 1 | 87 |
MIMAT0019262 | oar-miR-758-3p | 8 | ......a. | 1 | 87 |
MIMAT0019037 | hsa-miR-4501 | 8 | ......t. | 1 | 87 |
MIMAT0018288 | gma-miR4381 | 8 | ......t. | 1 | 87 |
MIMAT0016103 | ppy-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0015719 | ssc-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0013173 | eca-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0009925 | cfa-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0009370 | bta-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0008920 | dvi-miR-274 | 8 | ......a. | 1 | 87 |
MIMAT0008318 | ptr-miR-758 | 8 | ......a. | 1 | 87 |
MIMAT0006508 | mml-miR-758-3p | 8 | ......a. | 1 | 87 |
MIMAT0007547 | gga-miR-1664-3p | 8 | ......g. | 1 | 87 |
MIMAT0005335 | rno-miR-758-3p | 8 | ......a. | 1 | 87 |
MIMAT0003889 | mmu-miR-758-3p | 8 | ......a. | 1 | 87 |
MIMAT0003879 | hsa-miR-758-3p | 8 | ......a. | 1 | 87 |
MIMAT0000332 | dme-miR-274-5p | 8 | ......a. | 1 | 87 |
MIMAT0016992 | mmu-miR-153-5p | 8 | ......a. | 1 | 87 |
MIMAT0037074 | ssc-miR-9855-5p | 6 | __...... | 1 | 75 |
MIMAT0037073 | ssc-miR-9854-5p | 6 | __...... | 1 | 75 |
MIMAT0037073 | ssc-miR-9854-5p | 8 | __...... | 3 | 75 |
MIMAT0036613 | tch-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0036487 | tch-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0036273 | chi-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0036192 | chi-miR-377 | 3 | _......_ | 8 | 75 |
MIMAT0036158 | chi-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0035951 | chi-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0035639 | dvi-miR-9548-3p | 7 | ......__ | 2 | 75 |
MIMAT0035600 | dvi-miR-988-5p | 6 | _......_ | 1 | 75 |
MIMAT0035280 | gsa-miR-2001-5p | 7 | ......__ | 2 | 75 |
MIMAT0035232 | dme-miR-9384-3p | 6 | __...... | 1 | 75 |
MIMAT0034966 | efu-miR-342 | 3 | _......_ | 8 | 75 |
MIMAT0034877 | efu-miR-9258 | 6 | __...... | 1 | 75 |
MIMAT0034297 | cfa-miR-8807 | 8 | __...... | 3 | 75 |
MIMAT0034190 | gra-miR8760 | 6 | ......__ | 1 | 75 |
MIMAT0033841 | atr-miR8565g | 8 | __...... | 3 | 75 |
MIMAT0033692 | hsa-miR-8485 | 1 | __...... | 6 | 75 |
MIMAT0033692 | hsa-miR-8485 | 3 | __...... | 8 | 75 |
MIMAT0033460 | str-miR-360-5p | 7 | ......__ | 2 | 75 |
MIMAT0033129 | ppc-miR-360-5p | 7 | ......__ | 2 | 75 |
MIMAT0032776 | ath-miR8177 | 6 | _......_ | 1 | 75 |
MIMAT0032523 | ssa-miR-2188-3p | 8 | __...... | 3 | 75 |
MIMAT0031689 | bbe-miR-4866-5p | 1 | _......_ | 6 | 75 |
MIMAT0031213 | stu-miR8032g-3p | 7 | _......_ | 2 | 75 |
MIMAT0031212 | stu-miR8032f-3p | 7 | _......_ | 2 | 75 |
MIMAT0031211 | stu-miR8032e-3p | 7 | _......_ | 2 | 75 |
MIMAT0031210 | stu-miR8032d-3p | 7 | _......_ | 2 | 75 |
MIMAT0031209 | stu-miR8032b-3p | 7 | _......_ | 2 | 75 |
MIMAT0031208 | stu-miR8032a-3p | 7 | _......_ | 2 | 75 |
MIMAT0030911 | stu-miR8007b-5p | 7 | ......__ | 2 | 75 |
MIMAT0031176 | hsa-miR-7973 | 6 | ......__ | 1 | 75 |
MIMAT0030540 | prd-miR-360-5p | 7 | ......__ | 2 | 75 |
MIMAT0030225 | bdi-miR7742-3p | 6 | __...... | 1 | 75 |
MIMAT0032222 | lva-miR-2001-5p | 7 | ......__ | 2 | 75 |
MIMAT0032175 | pmi-miR-2001-5p | 7 | ......__ | 2 | 75 |
MIMAT0029943 | cbn-miR-360 | 7 | ......__ | 2 | 75 |
MIMAT0029923 | crm-miR-360 | 7 | ......__ | 2 | 75 |
MIMAT0029559 | ipu-miR-7562 | 1 | __...... | 6 | 75 |
MIMAT0029559 | ipu-miR-7562 | 3 | __...... | 8 | 75 |
MIMAT0029093 | gga-miR-7469-3p | 8 | __...... | 3 | 75 |
MIMAT0028983 | oan-miR-7417-3p | 6 | __...... | 1 | 75 |
MIMAT0028918 | mdo-miR-7398p-5p | 6 | __...... | 1 | 75 |
MIMAT0028908 | mdo-miR-7398o-5p | 6 | __...... | 1 | 75 |
MIMAT0028906 | mdo-miR-7398k-5p | 6 | __...... | 1 | 75 |
MIMAT0028904 | mdo-miR-7398n-5p | 6 | __...... | 1 | 75 |
MIMAT0028895 | mdo-miR-7394b-3p | 6 | ......__ | 1 | 75 |
MIMAT0028886 | mdo-miR-7394a-5p | 8 | __...... | 3 | 75 |
MIMAT0028885 | mdo-miR-7393-3p | 6 | ......__ | 1 | 75 |
MIMAT0028770 | mdo-miR-7370i-5p | 3 | _......_ | 8 | 75 |
MIMAT0028723 | mdo-miR-7355-3p | 3 | _......_ | 8 | 75 |
MIMAT0027634 | hsa-miR-6867-5p | 6 | __...... | 1 | 75 |
MIMAT0027634 | hsa-miR-6867-5p | 8 | __...... | 3 | 75 |
MIMAT0027541 | hsa-miR-6820-3p | 6 | ......__ | 1 | 75 |
MIMAT0027436 | hsa-miR-6768-5p | 1 | __...... | 6 | 75 |
MIMAT0027342 | tgu-miR-1467-3p | 2 | _......_ | 7 | 75 |
MIMAT0025068 | rno-miR-6329 | 8 | ......__ | 3 | 75 |
MIMAT0027306 | ppe-miR6277 | 6 | __...... | 1 | 75 |
MIMAT0027306 | ppe-miR6277 | 8 | __...... | 3 | 75 |
MIMAT0024431 | mse-miR-989 | 6 | _......_ | 1 | 75 |
MIMAT0024231 | ggo-miR-542 | 6 | ......__ | 1 | 75 |
MIMAT0024101 | ggo-miR-342 | 3 | _......_ | 8 | 75 |
MIMAT0024065 | ptr-miR-4504 | 6 | ......__ | 1 | 75 |
MIMAT0023984 | cgr-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0023923 | cgr-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0023760 | cgr-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0023357 | hco-miR-5904a | 7 | _......_ | 2 | 75 |
MIMAT0022023 | aca-miR-5407-3p | 8 | __...... | 3 | 75 |
MIMAT0020189 | dme-miR-4965-3p | 1 | _......_ | 6 | 75 |
MIMAT0020101 | bfl-miR-4866-5p | 1 | _......_ | 6 | 75 |
MIMAT0020031 | sko-miR-4825-3p | 1 | _......_ | 6 | 75 |
MIMAT0019960 | hsa-miR-4789-3p | 1 | __...... | 6 | 75 |
MIMAT0019854 | hsa-miR-4731-3p | 1 | __...... | 6 | 75 |
MIMAT0019604 | pma-miR-4571-3p | 6 | __...... | 1 | 75 |
MIMAT0019604 | pma-miR-4571-3p | 8 | __...... | 3 | 75 |
MIMAT0019308 | oar-miR-134-5p | 6 | ......__ | 1 | 75 |
MIMAT0019040 | hsa-miR-4504 | 6 | ......__ | 1 | 75 |
MIMAT0018313 | gma-miR1520r | 2 | ......__ | 7 | 75 |
MIMAT0018185 | hsa-miR-3911 | 6 | __...... | 1 | 75 |
MIMAT0018735 | tca-miR-3844-3p | 8 | __...... | 3 | 75 |
MIMAT0016822 | cin-miR-4202-5p | 6 | __...... | 1 | 75 |
MIMAT0016740 | cin-miR-4141-5p | 3 | ......__ | 8 | 75 |
MIMAT0017854 | rno-miR-1188-5p | 8 | _......_ | 3 | 75 |
MIMAT0017824 | rno-miR-466d | 7 | __...... | 2 | 75 |
MIMAT0016164 | ppy-miR-1228 | 1 | _......_ | 6 | 75 |
MIMAT0016045 | ppy-miR-603 | 1 | __...... | 6 | 75 |
MIMAT0015992 | ppy-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0015845 | ppy-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0015627 | bmo-miR-989b | 6 | _......_ | 1 | 75 |
MIMAT0015385 | bmo-miR-3207 | 6 | _......_ | 1 | 75 |
MIMAT0015038 | hsa-miR-3164 | 6 | ......__ | 1 | 75 |
MIMAT0014980 | hsa-miR-3118 | 6 | ......__ | 1 | 75 |
MIMAT0014920 | mmu-miR-3100-3p | 7 | ......__ | 2 | 75 |
MIMAT0014893 | mmu-miR-466n-5p | 7 | __...... | 2 | 75 |
MIMAT0014891 | mmu-miR-466p-5p | 8 | __...... | 3 | 75 |
MIMAT0014882 | mmu-miR-466m-5p | 6 | __...... | 1 | 75 |
MIMAT0014362 | cqu-miR-988-5p | 6 | __...... | 1 | 75 |
MIMAT0013944 | ssc-miR-342 | 3 | _......_ | 8 | 75 |
MIMAT0013925 | ssc-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0013238 | eca-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0013137 | eca-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0013127 | eca-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0013000 | eca-miR-301b-5p | 8 | ......__ | 3 | 75 |
MIMAT0012781 | mml-miR-603 | 1 | __...... | 6 | 75 |
MIMAT0013635 | bmo-miR-2761-3p | 6 | __...... | 1 | 75 |
MIMAT0012633 | bmo-miR-989a | 6 | _......_ | 1 | 75 |
MIMAT0013459 | mtr-miR2658 | 7 | ......__ | 2 | 75 |
MIMAT0013342 | mtr-miR2622 | 8 | __...... | 3 | 75 |
MIMAT0012435 | dsi-miR-988-5p | 6 | _......_ | 1 | 75 |
MIMAT0012380 | dps-miR-2559-5p | 7 | __...... | 2 | 75 |
MIMAT0012281 | dps-miR-307b | 1 | _......_ | 6 | 75 |
MIMAT0012233 | dps-miR-988-5p | 6 | _......_ | 1 | 75 |
MIMAT0012200 | dme-miR-2493-5p | 3 | _......_ | 8 | 75 |
MIMAT0012195 | dme-miR-307b-3p | 1 | _......_ | 6 | 75 |
MIMAT0012060 | bta-miR-2470 | 7 | __...... | 2 | 75 |
MIMAT0011992 | bta-miR-2423 | 7 | __...... | 2 | 75 |
MIMAT0011963 | bta-miR-2405 | 6 | __...... | 1 | 75 |
MIMAT0011943 | bta-miR-2390 | 8 | __...... | 3 | 75 |
MIMAT0011880 | bta-miR-2345 | 8 | __...... | 3 | 75 |
MIMAT0011314 | dre-miR-2193 | 8 | __...... | 3 | 75 |
MIMAT0011300 | dre-miR-2191 | 1 | _......_ | 6 | 75 |
MIMAT0012146 | sme-miR-9a-3p | 1 | __...... | 6 | 75 |
MIMAT0010021 | ppt-miR2082 | 6 | __...... | 1 | 75 |
MIMAT0009883 | cfa-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0009740 | spu-miR-2001 | 7 | ......__ | 2 | 75 |
MIMAT0009735 | sko-miR-2001 | 7 | ......__ | 2 | 75 |
MIMAT0009731 | lgi-miR-2001 | 7 | ......__ | 2 | 75 |
MIMAT0009721 | isc-miR-2001 | 7 | ......__ | 2 | 75 |
MIMAT0009705 | cte-miR-2001 | 7 | ......__ | 2 | 75 |
MIMAT0017346 | mmu-miR-669m-5p | 6 | __...... | 1 | 75 |
MIMAT0009227 | bta-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0008110 | ptr-miR-342 | 3 | _......_ | 8 | 75 |
MIMAT0008031 | ptr-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0009210 | osa-miR1850.2 | 7 | __...... | 2 | 75 |
MIMAT0006747 | cfa-miR-542 | 6 | ......__ | 1 | 75 |
MIMAT0006709 | cfa-miR-342 | 3 | _......_ | 8 | 75 |
MIMAT0006407 | mml-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0006283 | mml-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0006206 | mml-miR-147a | 7 | __...... | 2 | 75 |
MIMAT0006190 | mml-miR-134-5p | 6 | ......__ | 1 | 75 |
MIMAT0007678 | gga-miR-1769-3p | 7 | _......_ | 2 | 75 |
MIMAT0007557 | gga-miR-1673 | 7 | _......_ | 2 | 75 |
MIMAT0007467 | gga-miR-1601 | 7 | _......_ | 2 | 75 |
MIMAT0007434 | gga-miR-1574-5p | 7 | ......__ | 2 | 75 |
MIMAT0007346 | gga-miR-1467-3p | 1 | _......_ | 6 | 75 |
MIMAT0007076 | oan-miR-1421o-5p | 3 | ......__ | 8 | 75 |
MIMAT0005583 | hsa-miR-1228-3p | 1 | _......_ | 6 | 75 |
MIMAT0005848 | mmu-miR-466j | 6 | __...... | 1 | 75 |
MIMAT0005845 | mmu-miR-466k | 6 | __...... | 1 | 75 |
MIMAT0005845 | mmu-miR-466k | 8 | __...... | 3 | 75 |
MIMAT0005843 | mmu-miR-1188-5p | 8 | _......_ | 3 | 75 |
MIMAT0005837 | mmu-miR-1187 | 8 | __...... | 3 | 75 |
MIMAT0017325 | mmu-miR-466i-5p | 6 | __...... | 1 | 75 |
MIMAT0017325 | mmu-miR-466i-5p | 8 | __...... | 3 | 75 |
MIMAT0017322 | mmu-miR-466l-5p | 7 | __...... | 2 | 75 |
MIMAT0017312 | rno-miR-672-3p | 2 | __...... | 7 | 75 |
MIMAT0005278 | rno-miR-466b-5p | 8 | __...... | 3 | 75 |
MIMAT0020886 | dme-miR-988-5p | 6 | _......_ | 1 | 75 |
MIMAT0004930 | mmu-miR-466d-5p | 6 | __...... | 1 | 75 |
MIMAT0004930 | mmu-miR-466d-5p | 8 | __...... | 3 | 75 |
MIMAT0004884 | mmu-miR-466h-5p | 6 | __...... | 1 | 75 |
MIMAT0004879 | mmu-miR-466e-5p | 8 | __...... | 3 | 75 |
MIMAT0003846 | bta-miR-342 | 3 | _......_ | 8 | 75 |
MIMAT0017253 | mmu-miR-669c-3p | 3 | __...... | 8 | 75 |
MIMAT0017241 | mmu-miR-672-3p | 2 | __...... | 7 | 75 |
MIMAT0003418 | ebv-miR-BART8-3p | 1 | ......__ | 6 | 75 |
MIMAT0003389 | hsa-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0003271 | hsa-miR-603 | 1 | __...... | 6 | 75 |
MIMAT0003179 | rno-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0003172 | mmu-miR-542-3p | 6 | ......__ | 1 | 75 |
MIMAT0002478 | ppa-miR-147 | 7 | __...... | 2 | 75 |
MIMAT0002477 | mne-miR-147 | 7 | __...... | 2 | 75 |
MIMAT0002476 | sla-miR-147 | 7 | __...... | 2 | 75 |
MIMAT0002475 | ppy-miR-147a | 7 | __...... | 2 | 75 |
MIMAT0002474 | ptr-miR-147a | 7 | __...... | 2 | 75 |
MIMAT0002291 | ppa-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0002290 | mne-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0002289 | ppy-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0002288 | ggo-miR-134 | 6 | ......__ | 1 | 75 |
MIMAT0015213 | kshv-miR-K12-11-5p | 2 | ......__ | 7 | 75 |
MIMAT0004759 | mmu-miR-466a-5p | 8 | __...... | 3 | 75 |
MIMAT0000840 | rno-miR-134-5p | 6 | ......__ | 1 | 75 |
MIMAT0000753 | hsa-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0015121 | cel-miR-360-5p | 7 | ......__ | 2 | 75 |
MIMAT0000590 | mmu-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0000589 | rno-miR-342-3p | 3 | _......_ | 8 | 75 |
MIMAT0000447 | hsa-miR-134-5p | 6 | ......__ | 1 | 75 |
MIMAT0000251 | hsa-miR-147a | 7 | __...... | 2 | 75 |
MIMAT0000146 | mmu-miR-134-5p | 6 | ......__ | 1 | 75 |