| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gtccttc | 7 | ||
| MIMAT0035320 | gsa-miR-71c-5p | 7 | ....... | 1 | 100 |
| MIMAT0034641 | eca-miR-9095 | 8 | ....... | 2 | 100 |
| MIMAT0031007 | hsa-miR-8080 | 7 | ....... | 1 | 100 |
| MIMAT0028132 | mmu-miR-7117-3p | 2 | ....... | 8 | 100 |
| MIMAT0027797 | mmu-miR-6948-3p | 2 | ....... | 8 | 100 |
| MIMAT0027533 | hsa-miR-6816-3p | 7 | ....... | 1 | 100 |
| MIMAT0017629 | aly-miR844-5p | 8 | ....... | 2 | 100 |
| MIMAT0004456 | mdv2-miR-M17-5p | 2 | ....... | 8 | 100 |
| MIMAT0037047 | ssc-miR-9829-5p | 1 | ......_ | 6 | 85 |
| MIMAT0036815 | oha-miR-205a-5p | 1 | _...... | 6 | 85 |
| MIMAT0036375 | gma-miR9748 | 6 | _...... | 1 | 85 |
| MIMAT0035643 | dvi-miR-9549-3p | 6 | ......_ | 1 | 85 |
| MIMAT0035420 | nve-miR-9459 | 6 | ......_ | 1 | 85 |
| MIMAT0035156 | efu-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0035069 | efu-miR-9328 | 1 | _...... | 6 | 85 |
| MIMAT0034313 | cfa-miR-8823 | 2 | _...... | 7 | 85 |
| MIMAT0033112 | ppc-miR-8297-3p | 2 | _...... | 7 | 85 |
| MIMAT0032495 | ssa-miR-205b-5p | 1 | _...... | 6 | 85 |
| MIMAT0032492 | ssa-miR-205a-5p | 1 | _...... | 6 | 85 |
| MIMAT0031524 | ppe-miR8122-3p | 7 | _...... | 2 | 85 |
| MIMAT0030162 | bdi-miR5049-5p | 1 | _...... | 6 | 85 |
| MIMAT0029460 | ipu-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0028644 | mdo-miR-7322-5p | 8 | _...... | 3 | 85 |
| MIMAT0028530 | mdo-miR-7278-5p | 8 | _...... | 3 | 85 |
| MIMAT0028482 | mdo-miR-7258-5p | 8 | ......_ | 3 | 85 |
| MIMAT0028445 | mmu-miR-7238-3p | 3 | ......_ | 8 | 85 |
| MIMAT0026263 | ccr-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0027824 | mmu-miR-6962-5p | 6 | ......_ | 1 | 85 |
| MIMAT0027699 | mmu-miR-6899-3p | 3 | ......_ | 8 | 85 |
| MIMAT0027637 | hsa-miR-6868-3p | 2 | _...... | 7 | 85 |
| MIMAT0025731 | gga-miR-6635-5p | 8 | _...... | 3 | 85 |
| MIMAT0025697 | gga-miR-6603-3p | 6 | ......_ | 1 | 85 |
| MIMAT0025574 | bta-miR-2285q | 6 | ......_ | 1 | 85 |
| MIMAT0024331 | mml-miR-3173 | 6 | _...... | 1 | 85 |
| MIMAT0024251 | ggo-miR-1252 | 7 | _...... | 2 | 85 |
| MIMAT0024039 | ptr-miR-1252 | 7 | _...... | 2 | 85 |
| MIMAT0023845 | cgr-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0023224 | gma-miR2111d | 1 | ......_ | 6 | 85 |
| MIMAT0022812 | sha-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0022457 | gma-miR2111a | 1 | ......_ | 6 | 85 |
| MIMAT0022132 | osa-miR5499 | 6 | _...... | 1 | 85 |
| MIMAT0022125 | osa-miR5492 | 7 | _...... | 2 | 85 |
| MIMAT0021855 | aca-miR-205a | 1 | _...... | 6 | 85 |
| MIMAT0021618 | gma-miR5377 | 8 | _...... | 3 | 85 |
| MIMAT0021398 | rmi-miR-5325 | 8 | _...... | 3 | 85 |
| MIMAT0021393 | rmi-miR-5320 | 8 | _...... | 3 | 85 |
| MIMAT0020567 | tae-miR5085 | 6 | ......_ | 1 | 85 |
| MIMAT0019517 | pma-miR-205a-5p | 1 | _...... | 6 | 85 |
| MIMAT0019072 | hsa-miR-4533 | 8 | _...... | 3 | 85 |
| MIMAT0018269 | gma-miR4368b | 6 | ......_ | 1 | 85 |
| MIMAT0018810 | tca-miR-2944c-5p | 6 | _...... | 1 | 85 |
| MIMAT0016481 | cin-miR-4006e-3p | 1 | ......_ | 6 | 85 |
| MIMAT0016433 | cin-miR-4000b-1-3p | 1 | ......_ | 6 | 85 |
| MIMAT0016429 | cin-miR-4000d-3p | 1 | ......_ | 6 | 85 |
| MIMAT0016367 | lja-miR2111-3p | 1 | ......_ | 6 | 85 |
| MIMAT0016177 | ppy-miR-1252 | 7 | _...... | 2 | 85 |
| MIMAT0015798 | ppy-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0014304 | aae-miR-2944b-5p | 6 | _...... | 1 | 85 |
| MIMAT0014302 | aae-miR-2944a-5p | 6 | _...... | 1 | 85 |
| MIMAT0015344 | zma-miR395l-5p | 3 | _...... | 8 | 85 |
| MIMAT0013224 | eca-miR-501-5p | 2 | _...... | 7 | 85 |
| MIMAT0013091 | eca-miR-1248 | 1 | _...... | 6 | 85 |
| MIMAT0012962 | eca-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0012862 | hvt-miR-H10 | 1 | _...... | 6 | 85 |
| MIMAT0012749 | mdo-miR-205a | 1 | _...... | 6 | 85 |
| MIMAT0011667 | ppc-miR-2252 | 1 | _...... | 6 | 85 |
| MIMAT0009845 | cfa-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0007969 | ptr-miR-1237 | 1 | _...... | 6 | 85 |
| MIMAT0011142 | xla-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0006236 | mml-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0007478 | gga-miR-1612 | 6 | _...... | 1 | 85 |
| MIMAT0007333 | gga-miR-1456-5p | 8 | ......_ | 3 | 85 |
| MIMAT0006866 | oan-miR-205-5p | 1 | _...... | 6 | 85 |
| MIMAT0005944 | hsa-miR-1252-5p | 7 | _...... | 2 | 85 |
| MIMAT0005592 | hsa-miR-1237-3p | 1 | _...... | 6 | 85 |
| MIMAT0005412 | cre-miR1160.3 | 6 | ......_ | 1 | 85 |
| MIMAT0005362 | tae-miR1127a | 1 | _...... | 6 | 85 |
| MIMAT0005092 | ppt-miR1222e | 8 | _...... | 3 | 85 |
| MIMAT0005090 | ppt-miR1222c | 8 | _...... | 3 | 85 |
| MIMAT0005089 | ppt-miR1222b | 8 | _...... | 3 | 85 |
| MIMAT0005088 | ppt-miR902l-3p | 7 | _...... | 2 | 85 |
| MIMAT0005086 | ppt-miR902k-3p | 8 | _...... | 3 | 85 |
| MIMAT0005084 | ppt-miR902j-3p | 7 | _...... | 2 | 85 |
| MIMAT0004469 | mdv2-miR-M25-5p | 3 | _...... | 8 | 85 |
| MIMAT0003986 | sme-miR-71b-3p | 1 | _...... | 6 | 85 |
| MIMAT0003697 | xtr-miR-205a | 1 | _...... | 6 | 85 |
| MIMAT0003622 | xtr-miR-205b | 1 | _...... | 6 | 85 |
| MIMAT0003545 | bta-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0003917 | ppt-miR1222a | 8 | _...... | 3 | 85 |
| MIMAT0003502 | mmu-miR-712-5p | 2 | _...... | 7 | 85 |
| MIMAT0002966 | tni-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002965 | fru-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002546 | mne-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002545 | lla-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002544 | ptr-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002543 | ppa-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002542 | age-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002541 | ggo-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0002146 | ssc-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0001280 | dre-miR-205-5p | 1 | _...... | 6 | 85 |
| MIMAT0001184 | gga-miR-205a | 1 | _...... | 6 | 85 |
| MIMAT0000878 | rno-miR-205 | 1 | _...... | 6 | 85 |
| MIMAT0017059 | mmu-miR-211-3p | 8 | ......_ | 3 | 85 |
| MIMAT0000266 | hsa-miR-205-5p | 1 | _...... | 6 | 85 |
| MIMAT0000238 | mmu-miR-205-5p | 1 | _...... | 6 | 85 |
