RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gtgagaga | 8 | ||
MIMAT0033865 | atr-miR8581 | 1 | _....... | 7 | 87 |
MIMAT0027788 | mmu-miR-6944-5p | 1 | ......._ | 7 | 87 |
MIMAT0025650 | gga-miR-6571-3p | 1 | _....... | 7 | 87 |
MIMAT0022401 | ath-miR5640 | 1 | _....... | 7 | 87 |
MIMAT0021008 | gma-miR1513b | 1 | _....... | 7 | 87 |
MIMAT0018512 | ame-miR-3717 | 1 | _....... | 7 | 87 |
MIMAT0010064 | osa-miR2100-5p | 8 | _....... | 2 | 87 |
MIMAT0007853 | ath-miR1886.1 | 1 | _....... | 7 | 87 |
MIMAT0007371 | gma-miR1513a-5p | 1 | _....... | 7 | 87 |
MIMAT0005584 | hsa-miR-1229-3p | 7 | ......._ | 1 | 87 |
MIMAT0004236 | mmu-miR-741-3p | 1 | _....... | 7 | 87 |
MIMAT0033197 | ppc-miR-8326-3p | 8 | ......c. | 1 | 87 |
MIMAT0028931 | mdo-miR-7398g-3p | 8 | ......t. | 1 | 87 |
MIMAT0028118 | hsa-miR-7110-3p | 8 | .a...... | 1 | 87 |
MIMAT0024722 | nta-miR477b | 8 | .g...... | 1 | 87 |
MIMAT0020508 | dme-miR-4915-5p | 1 | ......a. | 8 | 87 |
MIMAT0019673 | osa-miR3979-5p | 8 | .a...... | 1 | 87 |
MIMAT0006797 | oan-miR-1328 | 1 | .a...... | 8 | 87 |
MIMAT0005122 | ppt-miR1029 | 8 | .a...... | 1 | 87 |
MIMAT0037045 | ssc-miR-9827-5p | 2 | ......__ | 7 | 75 |
MIMAT0036564 | tch-miR-185-5p | 3 | __...... | 8 | 75 |
MIMAT0036487 | tch-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0036481 | tch-miR-6529 | 1 | __...... | 6 | 75 |
MIMAT0036158 | chi-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0035856 | bra-miR400-5p | 3 | _......_ | 8 | 75 |
MIMAT0035678 | bra-miR9561-3p | 1 | __...... | 6 | 75 |
MIMAT0035552 | dvi-miR-1003-3p | 6 | ......__ | 1 | 75 |
MIMAT0035483 | sly-miR477-5p | 8 | __...... | 3 | 75 |
MIMAT0035262 | gsa-miR-67-5p | 6 | ......__ | 1 | 75 |
MIMAT0035073 | efu-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0034966 | efu-miR-342 | 6 | ......__ | 1 | 75 |
MIMAT0034664 | eca-miR-9115 | 3 | ......__ | 8 | 75 |
MIMAT0034479 | eca-miR-8950 | 1 | _......_ | 6 | 75 |
MIMAT0034470 | eca-miR-8941 | 3 | _......_ | 8 | 75 |
MIMAT0034213 | gra-miR8775 | 3 | ......__ | 8 | 75 |
MIMAT0033592 | sma-miR-281-5p | 1 | __...... | 6 | 75 |
MIMAT0033280 | ppc-miR-8359-5p | 3 | __...... | 8 | 75 |
MIMAT0033160 | ppc-miR-8364p-3p | 2 | __...... | 7 | 75 |
MIMAT0033139 | ppc-miR-8364o-3p | 2 | __...... | 7 | 75 |
MIMAT0033123 | ppc-miR-8364u-5p | 6 | __...... | 1 | 75 |
MIMAT0032922 | ppc-miR-8234-5p | 2 | ......__ | 7 | 75 |
MIMAT0032858 | ppc-miR-8214-5p | 1 | ......__ | 6 | 75 |
MIMAT0031840 | cpa-miR8143 | 1 | __...... | 6 | 75 |
MIMAT0031543 | ppe-miR6267c-3p | 3 | __...... | 8 | 75 |
MIMAT0030825 | prd-miR-7962-3p | 7 | ......__ | 2 | 75 |
MIMAT0030536 | prd-miR-7940c-5p | 2 | ......__ | 7 | 75 |
MIMAT0030251 | bdi-miR7754-3p | 7 | __...... | 2 | 75 |
MIMAT0029952 | bta-miR-7691 | 3 | _......_ | 8 | 75 |
MIMAT0029801 | mmu-miR-7649-3p | 6 | __...... | 1 | 75 |
MIMAT0029365 | lja-miR7539 | 3 | __...... | 8 | 75 |
MIMAT0029122 | hcmv-miR-UL59 | 8 | __...... | 3 | 75 |
MIMAT0029090 | gga-miR-7468-5p | 6 | ......__ | 1 | 75 |
MIMAT0029004 | oan-miR-7427-5p | 3 | ......__ | 8 | 75 |
MIMAT0028341 | mml-miR-7191-3p | 7 | _......_ | 2 | 75 |
MIMAT0028314 | mml-miR-6529-5p | 1 | __...... | 6 | 75 |
MIMAT0026454 | sbi-miR6235-5p | 3 | ......__ | 8 | 75 |
MIMAT0026434 | sbi-miR6229-5p | 8 | ......__ | 3 | 75 |
MIMAT0028101 | ddi-miR-7098 | 6 | _......_ | 1 | 75 |
MIMAT0028030 | mmu-miR-7063-5p | 2 | _......_ | 7 | 75 |
MIMAT0027966 | mmu-miR-7031-5p | 3 | _......_ | 8 | 75 |
MIMAT0027935 | mmu-miR-7015-3p | 6 | ......__ | 1 | 75 |
MIMAT0027887 | mmu-miR-6992-3p | 6 | ......__ | 1 | 75 |
MIMAT0027853 | mmu-miR-6975-3p | 6 | __...... | 1 | 75 |
MIMAT0027693 | mmu-miR-6896-3p | 8 | __...... | 3 | 75 |
MIMAT0027691 | hsa-miR-6895-3p | 8 | __...... | 3 | 75 |
MIMAT0027647 | hsa-miR-6873-3p | 7 | __...... | 2 | 75 |
MIMAT0027629 | hsa-miR-6864-3p | 1 | ......__ | 6 | 75 |
MIMAT0027567 | hsa-miR-6833-3p | 8 | __...... | 3 | 75 |
MIMAT0027535 | hsa-miR-6817-3p | 6 | __...... | 1 | 75 |
MIMAT0027469 | hsa-miR-6784-3p | 6 | ......__ | 1 | 75 |
MIMAT0027422 | hsa-miR-6761-5p | 3 | _......_ | 8 | 75 |
MIMAT0025722 | gga-miR-6626-5p | 3 | __...... | 8 | 75 |
MIMAT0025565 | bta-miR-6529a | 1 | __...... | 6 | 75 |
MIMAT0025304 | prv-miR-LLT1 | 6 | ......__ | 1 | 75 |
MIMAT0025018 | hme-miR-6311-3p | 3 | ......__ | 8 | 75 |
MIMAT0025011 | hme-miR-6305-3p | 2 | ......__ | 7 | 75 |
MIMAT0024985 | hme-miR-71 | 6 | ......__ | 1 | 75 |
MIMAT0031165 | ppe-miR482a-5p | 3 | ......__ | 8 | 75 |
MIMAT0024281 | ggo-miR-3615 | 6 | __...... | 1 | 75 |
MIMAT0024101 | ggo-miR-342 | 6 | ......__ | 1 | 75 |
MIMAT0024086 | ggo-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0023923 | cgr-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0023811 | cgr-miR-185-5p | 3 | __...... | 8 | 75 |
MIMAT0023130 | mtr-miR5750 | 3 | __...... | 8 | 75 |
MIMAT0023041 | tur-miR-71-3p | 6 | ......__ | 1 | 75 |
MIMAT0022311 | cel-miR-356b-5p | 3 | ......__ | 8 | 75 |
MIMAT0021962 | aca-miR-454-5p | 1 | ......__ | 6 | 75 |
MIMAT0021674 | gma-miR1513c | 3 | _......_ | 8 | 75 |
MIMAT0021248 | mtr-miR5252 | 1 | _......_ | 6 | 75 |
MIMAT0021178 | mtr-miR5221 | 3 | __...... | 8 | 75 |
MIMAT0020614 | mmu-miR-3473c | 6 | __...... | 1 | 75 |
MIMAT0020535 | ath-miR5029 | 3 | _......_ | 8 | 75 |
MIMAT0020026 | sko-miR-4822-3p | 6 | ......__ | 1 | 75 |
MIMAT0019920 | hsa-miR-4768-5p | 8 | __...... | 3 | 75 |
MIMAT0019819 | hsa-miR-4712-3p | 3 | _......_ | 8 | 75 |
MIMAT0019785 | hsa-miR-4693-3p | 1 | _......_ | 6 | 75 |
MIMAT0019704 | hsa-miR-4644 | 3 | __...... | 8 | 75 |
MIMAT0017994 | hsa-miR-3615 | 6 | __...... | 1 | 75 |
MIMAT0016858 | hsa-miR-4306 | 3 | __...... | 8 | 75 |
MIMAT0016272 | sja-miR-2162-5p | 2 | ......__ | 7 | 75 |
MIMAT0015845 | ppy-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0015781 | ppy-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0015645 | mmu-miR-3473a | 3 | __...... | 8 | 75 |
MIMAT0017647 | aly-miR859-5p | 6 | __...... | 1 | 75 |
MIMAT0017583 | aly-miR400-5p | 3 | _......_ | 8 | 75 |
MIMAT0015449 | bmo-miR-3265 | 3 | _......_ | 8 | 75 |
MIMAT0015399 | bmo-miR-3219 | 1 | ......__ | 6 | 75 |
MIMAT0014678 | hma-miR-3010 | 1 | _......_ | 6 | 75 |
MIMAT0014623 | tgu-miR-2954-5p | 3 | _......_ | 8 | 75 |
MIMAT0014401 | cqu-miR-71-3p | 6 | ......__ | 1 | 75 |
MIMAT0014225 | aae-miR-2a-5p | 7 | _......_ | 2 | 75 |
MIMAT0014221 | aae-miR-71-3p | 6 | ......__ | 1 | 75 |
MIMAT0014140 | ath-miR2936 | 3 | _......_ | 8 | 75 |
MIMAT0013944 | ssc-miR-342 | 6 | ......__ | 1 | 75 |
MIMAT0013137 | eca-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0012720 | hvt-miR-H8 | 7 | __...... | 2 | 75 |
MIMAT0012623 | bmo-miR-2744 | 3 | _......_ | 8 | 75 |
MIMAT0013585 | cte-miR-2716 | 1 | __...... | 6 | 75 |
MIMAT0012428 | dsi-miR-1003-3p | 6 | ......__ | 1 | 75 |
MIMAT0012403 | dps-miR-2567b-3p | 6 | ......__ | 1 | 75 |
MIMAT0012325 | dps-miR-2535-3p | 6 | ......__ | 1 | 75 |
MIMAT0012223 | dps-miR-980-5p | 8 | __...... | 3 | 75 |
MIMAT0011970 | bta-miR-1584-3p | 7 | __...... | 2 | 75 |
MIMAT0011967 | bta-miR-2409 | 6 | ......__ | 1 | 75 |
MIMAT0009794 | nve-miR-2036-5p | 3 | ......__ | 8 | 75 |
MIMAT0009460 | mmu-miR-1982-3p | 6 | ......__ | 1 | 75 |
MIMAT0009247 | bta-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0032043 | dvi-miR-2a-5p | 6 | _......_ | 1 | 75 |
MIMAT0019109 | tca-miR-71-3p | 6 | ......__ | 1 | 75 |
MIMAT0008110 | ptr-miR-342 | 6 | ......__ | 1 | 75 |
MIMAT0008053 | ptr-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0007759 | ssc-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0006709 | cfa-miR-342 | 6 | ......__ | 1 | 75 |
MIMAT0006660 | cfa-miR-185 | 3 | __...... | 8 | 75 |
MIMAT0006283 | mml-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0006219 | mml-miR-185-5p | 3 | __...... | 8 | 75 |
MIMAT0007589 | gga-miR-1697 | 6 | _......_ | 1 | 75 |
MIMAT0007517 | gga-miR-1642 | 1 | _......_ | 6 | 75 |
MIMAT0006016 | hiv1-miR-TAR-5p | 6 | __...... | 1 | 75 |
MIMAT0007215 | oan-miR-1406-3p | 8 | __...... | 3 | 75 |
MIMAT0022720 | hsa-miR-1304-3p | 6 | ......__ | 1 | 75 |
MIMAT0022719 | hsa-miR-1285-5p | 8 | ......__ | 3 | 75 |
MIMAT0005165 | ppt-miR1049 | 6 | __...... | 1 | 75 |
MIMAT0005522 | cel-miR-1021 | 3 | ......__ | 8 | 75 |
MIMAT0005031 | cel-miR-1018 | 2 | __...... | 7 | 75 |
MIMAT0005017 | dme-miR-1004-3p | 6 | ......__ | 1 | 75 |
MIMAT0005016 | dme-miR-1003-3p | 6 | ......__ | 1 | 75 |
MIMAT0004847 | mmu-miR-882 | 3 | __...... | 8 | 75 |
MIMAT0004845 | mmu-miR-881-5p | 3 | __...... | 8 | 75 |
MIMAT0004310 | ath-miR863-3p | 2 | _......_ | 7 | 75 |
MIMAT0004303 | ath-miR859 | 6 | __...... | 1 | 75 |
MIMAT0015243 | bmo-miR-71-3p | 7 | ......__ | 2 | 75 |
MIMAT0020351 | cel-miR-792-5p | 1 | _......_ | 6 | 75 |
MIMAT0012126 | sme-miR-755-3p | 1 | ......__ | 6 | 75 |
MIMAT0003846 | bta-miR-342 | 6 | ......__ | 1 | 75 |
MIMAT0001001 | ath-miR400 | 3 | _......_ | 8 | 75 |
MIMAT0000862 | rno-miR-185-5p | 3 | __...... | 8 | 75 |
MIMAT0000753 | hsa-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0000590 | mmu-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0000589 | rno-miR-342-3p | 6 | ......__ | 1 | 75 |
MIMAT0000455 | hsa-miR-185-5p | 3 | __...... | 8 | 75 |
MIMAT0000214 | mmu-miR-185-5p | 3 | __...... | 8 | 75 |
MIMAT0020780 | dme-miR-2a-1-5p | 6 | _......_ | 1 | 75 |