VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hbv-miR-b20-3p
gugcugg

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`gtgctgg`	7
MIMAT0034460	eca-miR-8932	2	`.......`	8	100
MIMAT0034294	cfa-miR-8804	8	`.......`	2	100
MIMAT0032747	ssa-miR-8160-3p	7	`.......`	1	100
MIMAT0029954	osa-miR1437b-3p	1	`.......`	7	100
MIMAT0018828	tca-miR-3868-5p	8	`.......`	2	100
MIMAT0031158	hbv-miR-B20-3p	1	`.......`	7	100
MIMAT0011956	bta-miR-2400	7	`.......`	1	100
MIMAT0010151	mcv-miR-M1-3p	2	`.......`	8	100
MIMAT0007240	oan-miR-1419b-5p	2	`.......`	8	100
MIMAT0005264	smo-miR1107	2	`.......`	8	100
MIMAT0036904	oha-miR-338-3p	7	`_......`	2	85
MIMAT0036259	chi-miR-497-5p	8	`......_`	3	85
MIMAT0036150	chi-miR-338-3p	7	`_......`	2	85
MIMAT0035863	bra-miR6032-3p	3	`_......`	8	85
MIMAT0034854	efu-miR-9238	8	`_......`	3	85
MIMAT0034762	eca-miR-9181	2	`_......`	7	85
MIMAT0034603	eca-miR-3548	6	`......_`	1	85
MIMAT0034516	eca-miR-8979	1	`_......`	6	85
MIMAT0034457	eca-miR-8929	1	`_......`	6	85
MIMAT0034443	eca-miR-8915	6	`......_`	1	85
MIMAT0032772	ath-miR8173	3	`......_`	8	85
MIMAT0032766	ath-miR8168	3	`......_`	8	85
MIMAT0032615	ssa-miR-338a-3p	7	`_......`	2	85
MIMAT0030679	prd-miR-7919-3p	6	`......_`	1	85
MIMAT0029538	ipu-miR-16c	6	`_......`	1	85
MIMAT0029502	ipu-miR-338	7	`_......`	2	85
MIMAT0029098	gga-miR-7472-5p	3	`......_`	8	85
MIMAT0028819	mdo-miR-7381-3p	2	`_......`	7	85
MIMAT0028768	mdo-miR-15c-5p	8	`......_`	3	85
MIMAT0028710	mdo-miR-7349-5p	1	`_......`	6	85
MIMAT0028346	mml-miR-7193-5p	3	`......_`	8	85
MIMAT0028336	mml-miR-7189-5p	3	`......_`	8	85
MIMAT0028151	ssc-miR-7138-5p	8	`_......`	3	85
MIMAT0026303	ccr-miR-457b	8	`......_`	3	85
MIMAT0026302	ccr-miR-457a	8	`......_`	3	85
MIMAT0026291	ccr-miR-338	7	`_......`	2	85
MIMAT0028081	mmu-miR-7087-3p	1	`_......`	6	85
MIMAT0027955	mmu-miR-7025-3p	6	`......_`	1	85
MIMAT0027953	mmu-miR-7024-3p	6	`_......`	1	85
MIMAT0027643	hsa-miR-6871-3p	6	`......_`	1	85
MIMAT0025750	gga-miR-6650-5p	8	`_......`	3	85
MIMAT0025749	gga-miR-6649-3p	1	`_......`	6	85
MIMAT0025738	gga-miR-6641-3p	2	`_......`	7	85
MIMAT0025706	gga-miR-6611-5p	1	`_......`	6	85
MIMAT0025686	gga-miR-6593-5p	1	`_......`	6	85
MIMAT0025680	gga-miR-6588-3p	2	`_......`	7	85
MIMAT0025679	gga-miR-6587-3p	1	`_......`	6	85
MIMAT0025249	ptc-miR6446	2	`_......`	7	85
MIMAT0027269	pgi-miR6143b-3p	6	`......_`	1	85
MIMAT0024233	ggo-miR-1287	1	`_......`	6	85
MIMAT0024125	ggo-miR-338	7	`_......`	2	85
MIMAT0023918	cgr-miR-338	7	`_......`	2	85
MIMAT0023480	hco-miR-5973	3	`_......`	8	85
MIMAT0022818	sha-miR-338	7	`_......`	2	85
MIMAT0022580	ola-miR-338-3p	7	`_......`	2	85
MIMAT0022273	hsa-miR-5580-5p	1	`_......`	6	85
MIMAT0021953	aca-miR-383-3p	8	`......_`	3	85
MIMAT0021938	aca-miR-338-3p	7	`_......`	2	85
MIMAT0021004	gma-miR862a	1	`_......`	6	85
MIMAT0019853	hsa-miR-4731-5p	1	`_......`	6	85
MIMAT0019595	pma-miR-4563	1	`_......`	6	85
MIMAT0019590	pma-miR-4558	1	`_......`	6	85
MIMAT0019069	hsa-miR-4530	7	`_......`	2	85
MIMAT0018717	tca-miR-316-3p	6	`_......`	1	85
MIMAT0018121	hsa-miR-3692-5p	3	`_......`	8	85
MIMAT0018013	vvi-miR3625-5p	8	`_......`	3	85
MIMAT0017861	rno-miR-3575	3	`_......`	8	85
MIMAT0017806	rno-miR-3548	6	`......_`	1	85
MIMAT0016210	ppy-miR-1287	1	`_......`	6	85
MIMAT0015937	ppy-miR-512-3p	3	`......_`	8	85
MIMAT0015841	ppy-miR-338-3p	7	`_......`	2	85
MIMAT0015713	ssc-miR-338	7	`_......`	2	85
MIMAT0014865	mmu-miR-3078-3p	2	`_......`	7	85
MIMAT0014542	tgu-miR-338-3p	7	`_......`	2	85
MIMAT0014456	tgu-miR-2958	1	`_......`	6	85
MIMAT0013036	eca-miR-338-3p	7	`_......`	2	85
MIMAT0017369	rno-miR-667-5p	3	`......_`	8	85
MIMAT0012599	bmo-miR-2723	6	`_......`	1	85
MIMAT0012458	dsi-miR-1000-3p	2	`_......`	7	85
MIMAT0012266	dps-miR-1000-3p	2	`_......`	7	85
MIMAT0012033	bta-miR-2452	1	`......_`	6	85
MIMAT0010049	osa-miR2092-3p	7	`_......`	2	85
MIMAT0009971	bta-miR-1287	1	`_......`	6	85
MIMAT0019141	bfl-miR-31-3p	3	`......_`	8	85
MIMAT0009292	bta-miR-338	7	`_......`	2	85
MIMAT0008291	ptr-miR-634	8	`_......`	3	85
MIMAT0008180	ptr-miR-512	3	`......_`	8	85
MIMAT0008106	ptr-miR-338	7	`_......`	2	85
MIMAT0006739	cfa-miR-338	7	`_......`	2	85
MIMAT0006372	mml-miR-512-3p	3	`......_`	8	85
MIMAT0006278	mml-miR-338-3p	7	`_......`	2	85
MIMAT0007661	gga-miR-1754-5p	3	`......_`	8	85
MIMAT0007640	gga-miR-1737	6	`......_`	1	85
MIMAT0007577	gga-miR-1687-3p	2	`_......`	7	85
MIMAT0007533	gga-miR-1654	2	`_......`	7	85
MIMAT0007262	oan-miR-1419e-5p	2	`_......`	7	85
MIMAT0005878	hsa-miR-1287-5p	1	`_......`	6	85
MIMAT0005158	ppt-miR1045	3	`......_`	8	85
MIMAT0020900	dme-miR-1000-3p	2	`_......`	7	85
MIMAT0004967	cre-miR909.1	1	`_......`	6	85
MIMAT0004250	ath-miR832-5p	1	`_......`	6	85
MIMAT0004136	mdo-miR-338	7	`_......`	2	85
MIMAT0003665	xtr-miR-338	7	`_......`	2	85
MIMAT0003660	xtr-miR-93b	3	`......_`	8	85
MIMAT0017239	mmu-miR-667-5p	3	`......_`	8	85
MIMAT0003304	hsa-miR-634	8	`_......`	3	85
MIMAT0003008	tni-miR-338	7	`_......`	2	85
MIMAT0003007	fru-miR-338	7	`_......`	2	85
MIMAT0002823	hsa-miR-512-3p	3	`......_`	8	85
MIMAT0002188	kshv-miR-K12-6-5p	6	`_......`	1	85
MIMAT0001873	dre-miR-338	7	`_......`	2	85
MIMAT0015158	zma-miR172c-5p	6	`......_`	1	85
MIMAT0015157	zma-miR172b-5p	6	`......_`	1	85
MIMAT0015156	zma-miR172d-5p	6	`......_`	1	85
MIMAT0000763	hsa-miR-338-3p	7	`_......`	2	85
MIMAT0000582	mmu-miR-338-3p	7	`_......`	2	85
MIMAT0000581	rno-miR-338-3p	7	`_......`	2	85
MIMAT0020303	cel-miR-35-5p	1	`_......`	6	85