VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hsv1-miR-h6-5p
guggaag

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`gtggaag`	7
MIMAT0034008	gra-miR8650	2	`.......`	8	100
MIMAT0029898	mmu-miR-7686-5p	8	`.......`	2	100
MIMAT0028513	mdo-miR-7271-3p	2	`.......`	8	100
MIMAT0028267	mml-miR-7166-3p	1	`.......`	7	100
MIMAT0027734	mmu-miR-6917-5p	2	`.......`	8	100
MIMAT0027302	ppe-miR6275	2	`.......`	8	100
MIMAT0022839	hsa-miR-3190-3p	2	`.......`	8	100
MIMAT0015281	hsv1-miR-H6-5p	2	`.......`	8	100
MIMAT0037224	ata-miR9677-5p	6	`......_`	1	85
MIMAT0037192	ata-miR528-5p	1	`_......`	6	85
MIMAT0037170	ata-miR396c-5p	6	`......_`	1	85
MIMAT0037168	ata-miR396e-5p	6	`......_`	1	85
MIMAT0037034	ssc-miR-9816-3p	2	`_......`	7	85
MIMAT0036952	oha-miR-875-3p	3	`_......`	8	85
MIMAT0036945	oha-miR-7-5p	1	`_......`	6	85
MIMAT0036465	tch-miR-7-5p	1	`_......`	6	85
MIMAT0036288	chi-miR-7-5p	1	`_......`	6	85
MIMAT0035852	bra-miR396-5p	6	`......_`	1	85
MIMAT0035785	tae-miR9670-3p	3	`......_`	8	85
MIMAT0035588	dvi-miR-969-5p	8	`......_`	3	85
MIMAT0035481	sly-miR396b	6	`......_`	1	85
MIMAT0035455	sly-miR396a-5p	6	`......_`	1	85
MIMAT0035282	gsa-miR-7-5p	1	`_......`	6	85
MIMAT0035187	efu-miR-7c	1	`_......`	6	85
MIMAT0035167	efu-miR-9186e	8	`_......`	3	85
MIMAT0035157	efu-miR-7a	2	`_......`	7	85
MIMAT0035004	efu-miR-7b	1	`_......`	6	85
MIMAT0034852	efu-miR-9234c	8	`_......`	3	85
MIMAT0034189	gra-miR8759	3	`......_`	8	85
MIMAT0034148	gra-miR8736	1	`......_`	6	85
MIMAT0033942	atr-miR396e	6	`......_`	1	85
MIMAT0033940	atr-miR396c	6	`......_`	1	85
MIMAT0033939	atr-miR396b	6	`......_`	1	85
MIMAT0033598	sma-miR-7-5p	1	`_......`	6	85
MIMAT0033532	sma-miR-8414-5p	7	`_......`	2	85
MIMAT0032693	ssa-miR-7a-5p	1	`_......`	6	85
MIMAT0031858	lus-miR396e	6	`......_`	1	85
MIMAT0031822	cpa-miR396	6	`......_`	1	85
MIMAT0031714	bbe-miR-7-5p	1	`_......`	6	85
MIMAT0031557	ppe-miR8130-3p	8	`_......`	3	85
MIMAT0031523	ppe-miR8122-5p	6	`......_`	1	85
MIMAT0031495	ppe-miR396b	6	`......_`	1	85
MIMAT0031494	ppe-miR396a	6	`......_`	1	85
MIMAT0031335	stu-miR396-5p	6	`......_`	1	85
MIMAT0030738	prd-miR-7940a-5p	1	`_......`	6	85
MIMAT0030334	hhi-miR-7790	1	`_......`	6	85
MIMAT0030259	bdi-miR7757-5p.2	6	`_......`	1	85
MIMAT0031154	ama-miR396-5p	6	`......_`	1	85
MIMAT0032191	lva-miR-7-5p	1	`_......`	6	85
MIMAT0032141	pmi-miR-7-5p	1	`_......`	6	85
MIMAT0029804	mmu-miR-7651-5p	3	`......_`	8	85
MIMAT0029527	ipu-miR-7b	1	`_......`	6	85
MIMAT0029526	ipu-miR-7a	1	`_......`	6	85
MIMAT0029331	lja-miR1507b	7	`_......`	2	85
MIMAT0029330	lja-miR1507a	7	`_......`	2	85
MIMAT0029278	mes-miR396f	6	`......_`	1	85
MIMAT0029277	mes-miR396e	6	`......_`	1	85
MIMAT0029276	mes-miR396d	6	`......_`	1	85
MIMAT0029275	mes-miR396c	6	`......_`	1	85
MIMAT0029274	mes-miR396b	6	`......_`	1	85
MIMAT0029273	mes-miR396a	6	`......_`	1	85
MIMAT0028651	mdo-miR-7325-3p	3	`......_`	8	85
MIMAT0026328	ccr-miR-2192	1	`_......`	6	85
MIMAT0026320	ccr-miR-7b	1	`_......`	6	85
MIMAT0026319	ccr-miR-7a	1	`_......`	6	85
MIMAT0026162	cme-miR396e	6	`......_`	1	85
MIMAT0026147	cme-miR396d	6	`......_`	1	85
MIMAT0026146	cme-miR396c	6	`......_`	1	85
MIMAT0026145	cme-miR396b	6	`......_`	1	85
MIMAT0026106	cme-miR396a	6	`......_`	1	85
MIMAT0026039	mdm-miR482d	3	`_......`	8	85
MIMAT0025995	mdm-miR396g	6	`......_`	1	85
MIMAT0025994	mdm-miR396f	6	`......_`	1	85
MIMAT0025993	mdm-miR396e	6	`......_`	1	85
MIMAT0025992	mdm-miR396d	6	`......_`	1	85
MIMAT0025991	mdm-miR396c	6	`......_`	1	85
MIMAT0025990	mdm-miR396b	6	`......_`	1	85
MIMAT0025989	mdm-miR396a	6	`......_`	1	85
MIMAT0028061	mmu-miR-7077-3p	7	`_......`	2	85
MIMAT0028001	mmu-miR-7048-3p	7	`_......`	2	85
MIMAT0027868	mmu-miR-6983-5p	2	`_......`	7	85
MIMAT0027566	hsa-miR-6833-5p	3	`......_`	8	85
MIMAT0025783	gga-miR-6679-5p	1	`_......`	6	85
MIMAT0025772	gga-miR-6670-5p	1	`......_`	6	85
MIMAT0025675	gga-miR-6584-5p	3	`_......`	8	85
MIMAT0025475	hsa-miR-6509-3p	6	`......_`	1	85
MIMAT0025287	hbr-miR396b	6	`......_`	1	85
MIMAT0024984	hme-miR-7	1	`_......`	6	85
MIMAT0024779	nta-miR6163	1	`_......`	6	85
MIMAT0024710	nta-miR396c	6	`......_`	1	85
MIMAT0024709	nta-miR396b	6	`......_`	1	85
MIMAT0024708	nta-miR396a	6	`......_`	1	85
MIMAT0027213	lus-miR396c	6	`......_`	1	85
MIMAT0027212	lus-miR396b	6	`......_`	1	85
MIMAT0027207	lus-miR396a	6	`......_`	1	85
MIMAT0024529	cca-miR396a-5p	6	`......_`	1	85
MIMAT0024426	mse-miR-7	1	`_......`	6	85
MIMAT0024344	mml-miR-4650	1	`_......`	6	85
MIMAT0024004	cgr-miR-7b	1	`_......`	6	85
MIMAT0023820	cgr-miR-1903	2	`_......`	7	85
MIMAT0023704	hsa-miR-6079	2	`_......`	7	85
MIMAT0023590	sly-miR6022	1	`_......`	6	85
MIMAT0023589	stu-miR6022	1	`_......`	6	85
MIMAT0023588	nta-miR6021	2	`_......`	7	85
MIMAT0023536	dpr-miR396	6	`......_`	1	85
MIMAT0023387	hco-miR-7	1	`_......`	6	85
MIMAT0032132	gma-miR396k-5p	6	`......_`	1	85
MIMAT0022641	ola-miR-7	1	`_......`	6	85
MIMAT0023036	tur-miR-7-5p	1	`_......`	6	85
MIMAT0022517	ssl-miR396	6	`......_`	1	85
MIMAT0022453	gma-miR5671a	3	`_......`	8	85
MIMAT0023005	ath-miR5654-3p	1	`_......`	6	85
MIMAT0022402	ath-miR5641	1	`_......`	6	85
MIMAT0022680	amg-miR396	6	`......_`	1	85
MIMAT0022674	aau-miR396	6	`......_`	1	85
MIMAT0021983	aca-miR-7-5p	1	`_......`	6	85
MIMAT0021669	gma-miR396i-5p	6	`......_`	1	85
MIMAT0021429	asu-miR-7-5p	1	`_......`	6	85
MIMAT0021393	rmi-miR-5320	1	`_......`	6	85
MIMAT0021132	mtr-miR5204	3	`_......`	8	85
MIMAT0020295	ssp-miR396	6	`......_`	1	85
MIMAT0020288	ssp-miR528	1	`_......`	6	85
MIMAT0020683	bdi-miR396e-5p	6	`......_`	1	85
MIMAT0020676	bdi-miR396c-5p	6	`......_`	1	85
MIMAT0020671	bdi-miR396d-5p	6	`......_`	1	85
MIMAT0020662	bdi-miR528-5p	1	`_......`	6	85
MIMAT0020524	ath-miR5020a	1	`_......`	6	85
MIMAT0020259	emu-miR-7	1	`_......`	6	85
MIMAT0020233	egr-miR-7	1	`_......`	6	85
MIMAT0020431	tcc-miR396e	6	`......_`	1	85
MIMAT0020430	tcc-miR396d	6	`......_`	1	85
MIMAT0020429	tcc-miR396c	6	`......_`	1	85
MIMAT0020428	tcc-miR396b	6	`......_`	1	85
MIMAT0020427	tcc-miR396a	6	`......_`	1	85
MIMAT0019372	pma-miR-7b	1	`_......`	6	85
MIMAT0019370	pma-miR-7a-5p	1	`_......`	6	85
MIMAT0020368	cgr-miR-7a	1	`_......`	6	85
MIMAT0019363	hsa-miR-3978	1	`......_`	6	85
MIMAT0020966	bcy-miR396b	6	`......_`	1	85
MIMAT0020965	bcy-miR396a	6	`......_`	1	85
MIMAT0020962	bgy-miR396b	6	`......_`	1	85
MIMAT0020961	bgy-miR396a	6	`......_`	1	85
MIMAT0019072	hsa-miR-4533	1	`_......`	6	85
MIMAT0018464	csi-miR396b	6	`......_`	1	85
MIMAT0018463	csi-miR396a	6	`......_`	1	85
MIMAT0018436	nlo-miR-7	1	`_......`	6	85
MIMAT0018345	gma-miR396e	6	`......_`	1	85
MIMAT0018861	tca-miR-3882-3p	1	`_......`	6	85
MIMAT0018846	tca-miR-3877-5p	8	`_......`	3	85
MIMAT0018820	tca-miR-750-5p	3	`......_`	8	85
MIMAT0018154	pab-miR396c	6	`......_`	1	85
MIMAT0018153	pab-miR396b	6	`......_`	1	85
MIMAT0018152	pab-miR396a	6	`......_`	1	85
MIMAT0018064	dme-miR-3645-3p	3	`_......`	8	85
MIMAT0016249	sja-miR-7-5p	1	`_......`	6	85
MIMAT0015659	nvi-miR-7	1	`_......`	6	85
MIMAT0015651	hsv2-miR-H6-5p	3	`_......`	8	85
MIMAT0017784	esi-miR3454d-3p	6	`_......`	1	85
MIMAT0017770	esi-miR3454e-3p	6	`_......`	1	85
MIMAT0017756	esi-miR3455-3p	3	`......_`	8	85
MIMAT0017752	esi-miR3454c-3p	6	`_......`	1	85
MIMAT0017748	esi-miR3454a-3p	6	`_......`	1	85
MIMAT0017746	esi-miR3454g-3p	6	`_......`	1	85
MIMAT0017725	aly-miR3445-3p.1	3	`_......`	8	85
MIMAT0017559	aly-miR396b-5p	6	`......_`	1	85
MIMAT0017557	aly-miR396a-5p	6	`......_`	1	85
MIMAT0015089	hsa-miR-3202	1	`_......`	6	85
MIMAT0015057	hsa-miR-3180-5p	6	`_......`	1	85
MIMAT0014734	api-miR-7	1	`_......`	6	85
MIMAT0014600	tgu-miR-2996	7	`_......`	2	85
MIMAT0014510	tgu-miR-7-5p	1	`_......`	6	85
MIMAT0014423	cqu-miR-7	1	`_......`	6	85
MIMAT0014290	aae-miR-7	1	`_......`	6	85
MIMAT0014192	rco-miR396	6	`......_`	1	85
MIMAT0014099	bma-miR-7	1	`_......`	6	85
MIMAT0014078	ccl-miR396	6	`......_`	1	85
MIMAT0019193	rlcv-miR-rL1-28-5p	1	`_......`	6	85
MIMAT0014048	sbi-miR528	1	`_......`	6	85
MIMAT0014029	zma-miR528b-5p	1	`_......`	6	85
MIMAT0014028	zma-miR528a-5p	1	`_......`	6	85
MIMAT0014015	zma-miR396f-5p	6	`......_`	1	85
MIMAT0014014	zma-miR396e-5p	6	`......_`	1	85
MIMAT0012905	eca-miR-7	1	`_......`	6	85
MIMAT0013705	bmo-miR-2801	1	`......_`	6	85
MIMAT0012702	isc-miR-7	1	`_......`	6	85
MIMAT0012666	dpu-miR-7	1	`_......`	6	85
MIMAT0012577	aqc-miR396b	6	`......_`	1	85
MIMAT0012576	aqc-miR396a	6	`......_`	1	85
MIMAT0013316	mtr-miR2609b	1	`_......`	6	85
MIMAT0013315	mtr-miR2609a	1	`_......`	6	85
MIMAT0012069	bta-miR-2477	1	`......_`	6	85
MIMAT0011939	bta-miR-2387	1	`_......`	6	85
MIMAT0011358	sbi-miR396e	6	`......_`	1	85
MIMAT0011253	sme-miR-7d-5p	1	`_......`	6	85
MIMAT0011170	pvu-miR159a.2	6	`_......`	1	85
MIMAT0010150	mcv-miR-M1-5p	1	`_......`	6	85
MIMAT0011158	hsa-miR-2115-5p	8	`_......`	3	85
MIMAT0010088	lja-miR396	6	`......_`	1	85
MIMAT0010079	gma-miR396c	6	`......_`	1	85
MIMAT0010077	zma-miR396d	6	`......_`	1	85
MIMAT0010076	zma-miR396c	6	`......_`	1	85
MIMAT0010055	osa-miR2095-3p	6	`_......`	1	85
MIMAT0009651	spu-miR-7	1	`_......`	6	85
MIMAT0009608	sko-miR-7-5p	1	`_......`	6	85
MIMAT0009560	lgi-miR-7	1	`_......`	6	85
MIMAT0009506	cte-miR-7	1	`_......`	6	85
MIMAT0009464	bfl-miR-7	1	`_......`	6	85
MIMAT0009119	dya-miR-7	1	`_......`	6	85
MIMAT0009009	dwi-miR-7	1	`_......`	6	85
MIMAT0008931	dvi-miR-7-5p	1	`_......`	6	85
MIMAT0008901	dsi-miR-7	1	`_......`	6	85
MIMAT0008771	dse-miR-7	1	`_......`	6	85
MIMAT0008742	dpe-miR-7	1	`_......`	6	85
MIMAT0008692	dmo-miR-7	1	`_......`	6	85
MIMAT0008622	dgr-miR-7	1	`_......`	6	85
MIMAT0008537	der-miR-7	1	`_......`	6	85
MIMAT0008410	dan-miR-7	1	`_......`	6	85
MIMAT0008355	tca-miR-7-5p	1	`_......`	6	85
MIMAT0006768	cel-miR-1828	3	`_......`	8	85
MIMAT0006634	cfa-miR-7	1	`_......`	6	85
MIMAT0006560	vvi-miR396c	6	`......_`	1	85
MIMAT0006159	mml-miR-7	1	`_......`	6	85
MIMAT0007496	gga-miR-1626-3p	3	`_......`	8	85
MIMAT0006120	csa-miR-7	1	`_......`	6	85
MIMAT0006091	cin-miR-7-5p	1	`_......`	6	85
MIMAT0006078	odi-miR-7	1	`_......`	6	85
MIMAT0007027	oan-miR-1364	6	`......_`	1	85
MIMAT0006986	oan-miR-7-5p	1	`_......`	6	85
MIMAT0006973	oan-miR-1421f-5p	1	`_......`	6	85
MIMAT0006969	oan-miR-1421d-5p	1	`_......`	6	85
MIMAT0006868	oan-miR-1340-5p	6	`_......`	1	85
MIMAT0005726	vvi-miR396d	6	`......_`	1	85
MIMAT0005725	vvi-miR396b	6	`......_`	1	85
MIMAT0005724	vvi-miR396a	6	`......_`	1	85
MIMAT0005227	smo-miR396	6	`......_`	1	85
MIMAT0004453	mdv2-miR-M15-5p	3	`_......`	8	85
MIMAT0004999	pta-miR396	6	`......_`	1	85
MIMAT0004448	bna-miR396a	6	`......_`	1	85
MIMAT0003902	ppt-miR477g-3p	3	`_......`	8	85
MIMAT0005819	ghr-miR396b	6	`......_`	1	85
MIMAT0005818	ghr-miR396a	6	`......_`	1	85
MIMAT0011108	mtr-miR396b-5p	6	`......_`	1	85
MIMAT0011107	mtr-miR396a-5p	6	`......_`	1	85
MIMAT0026695	mdo-miR-141-5p	8	`_......`	3	85
MIMAT0004086	mdo-miR-7	1	`_......`	6	85
MIMAT0003971	sme-miR-7c-5p	1	`_......`	6	85
MIMAT0003970	sme-miR-7b-5p	1	`_......`	6	85
MIMAT0003969	sme-miR-7a-5p	1	`_......`	6	85
MIMAT0003843	bta-miR-7	1	`_......`	6	85
MIMAT0004192	bmo-miR-7-5p	1	`_......`	6	85
MIMAT0003552	xtr-miR-7	1	`_......`	6	85
MIMAT0003744	hsv1-miR-H1-5p	3	`_......`	8	85
MIMAT0003010	tni-miR-7	1	`_......`	6	85
MIMAT0003009	fru-miR-7	1	`_......`	6	85
MIMAT0002884	osa-miR528-5p	1	`_......`	6	85
MIMAT0002485	ptr-miR-7	1	`_......`	6	85
MIMAT0002484	ppa-miR-7	1	`_......`	6	85
MIMAT0002483	mne-miR-7	1	`_......`	6	85
MIMAT0002482	lla-miR-7	1	`_......`	6	85
MIMAT0002481	sla-miR-7	1	`_......`	6	85
MIMAT0002480	ppy-miR-7	1	`_......`	6	85
MIMAT0002479	ggo-miR-7	1	`_......`	6	85
MIMAT0026561	mml-miR-141-5p	7	`_......`	2	85
MIMAT0002141	ssc-miR-7	1	`_......`	6	85
MIMAT0020345	ath-miR447a.2-3p	3	`_......`	8	85
MIMAT0002037	ptc-miR396g-5p	6	`......_`	1	85
MIMAT0002036	ptc-miR396f	6	`......_`	1	85
MIMAT0002035	ptc-miR396e-5p	6	`......_`	1	85
MIMAT0002034	ptc-miR396d	6	`......_`	1	85
MIMAT0002033	ptc-miR396c	6	`......_`	1	85
MIMAT0002032	ptc-miR396b	6	`......_`	1	85
MIMAT0002031	ptc-miR396a	6	`......_`	1	85
MIMAT0001703	zma-miR396a-5p	6	`......_`	1	85
MIMAT0001702	zma-miR396b-5p	6	`......_`	1	85
MIMAT0001688	gma-miR396b-5p	6	`......_`	1	85
MIMAT0001687	gma-miR396a-5p	6	`......_`	1	85
MIMAT0001657	sof-miR396	6	`......_`	1	85
MIMAT0001523	aga-miR-7	1	`_......`	6	85
MIMAT0001489	ame-miR-7	1	`_......`	6	85
MIMAT0001436	sbi-miR396c	6	`......_`	1	85
MIMAT0001435	sbi-miR396a	6	`......_`	1	85
MIMAT0001434	sbi-miR396b	6	`......_`	1	85
MIMAT0001266	dre-miR-7a	1	`_......`	6	85
MIMAT0001265	dre-miR-7b	1	`_......`	6	85
MIMAT0001209	dps-miR-7	1	`_......`	6	85
MIMAT0001192	gga-miR-7b	1	`_......`	6	85
MIMAT0001157	gga-miR-7	1	`_......`	6	85
MIMAT0000979	osa-miR396c-5p	6	`......_`	1	85
MIMAT0000978	osa-miR396b-5p	6	`......_`	1	85
MIMAT0000977	osa-miR396a-5p	6	`......_`	1	85
MIMAT0000945	ath-miR396b-5p	6	`......_`	1	85
MIMAT0000944	ath-miR396a-5p	6	`......_`	1	85
MIMAT0000780	rno-miR-7b	1	`_......`	6	85
MIMAT0000678	mmu-miR-7b-5p	1	`_......`	6	85
MIMAT0000677	mmu-miR-7a-5p	1	`_......`	6	85
MIMAT0000606	rno-miR-7a-5p	1	`_......`	6	85
MIMAT0000252	hsa-miR-7-5p	1	`_......`	6	85
MIMAT0000112	dme-miR-7-5p	1	`_......`	6	85
MIMAT0015099	cel-miR-51-3p	3	`_......`	8	85