Result for your query miRNA sequence
>rrv-miR-rr1-11-3p
guggguc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gtgggtc7
MIMAT0028264mml-miR-1180-5p8.......2100
MIMAT0028126hsa-miR-7114-3p8.......2100
MIMAT0032138sma-miR-61-5p2.......8100
MIMAT0026735hsa-miR-1180-5p8.......2100
MIMAT0036874oha-miR-2985b-5p1......_685
MIMAT0036871oha-miR-2985a-5p1......_685
MIMAT0036779oha-miR-193-5p1_......685
MIMAT0035732rno-miR-18963......_885
MIMAT0034553eca-miR-90121_......685
MIMAT0034503eca-miR-89683_......885
MIMAT0034188gra-miR8757b1_......685
MIMAT0033571sma-miR-8433-3p3_......885
MIMAT0033331str-miR-81a-5p2_......785
MIMAT0032664ssa-miR-551-3p8_......385
MIMAT0031736bbe-miR-4857-3p1_......685
MIMAT0031189stu-miR7999-5p2_......785
MIMAT0030688prd-miR-81-5p1_......685
MIMAT0029542ipu-miR-5518_......385
MIMAT0028956oan-miR-2985-5p1......_685
MIMAT0028630mdo-miR-7315-5p1......_685
MIMAT0028394mmu-miR-7213-5p3_......885
MIMAT0028308mml-miR-7181-5p1_......685
MIMAT0026329ccr-miR-5518_......385
MIMAT0027807mmu-miR-6953-3p8_......385
MIMAT0027620hsa-miR-6769b-5p3......_885
MIMAT0027438hsa-miR-6769a-5p3......_885
MIMAT0027418hsa-miR-6759-5p3......_885
MIMAT0027383hsa-miR-6741-5p1......_685
MIMAT0025647gga-miR-6570-5p8_......385
MIMAT0025576bta-miR-2285s8_......385
MIMAT0025388ssc-miR-23661_......685
MIMAT0025379ssc-miR-551a8_......385
MIMAT0024756nta-miR6154b1_......685
MIMAT0024755nta-miR6154a1_......685
MIMAT0024188ggo-miR-551b8_......385
MIMAT0024186ggo-miR-551a8_......385
MIMAT0023109tur-miR-263b-3p1......_685
MIMAT0022406ath-miR56441......_685
MIMAT0021982aca-miR-5518_......385
MIMAT0021826aca-miR-193-5p1_......685
MIMAT0020134cel-miR-49271......_685
MIMAT0019586pma-miR-45541_......685
MIMAT0019558pma-miR-5518_......385
MIMAT0019229hsa-miR-3940-5p1......_685
MIMAT0018745tca-miR-3848-3p8......_385
MIMAT0016771cin-miR-4163-3p6......_185
MIMAT0016655cin-miR-4083-5p1......_685
MIMAT0016160ppy-miR-1225-5p1......_685
MIMAT0015998ppy-miR-551b8_......385
MIMAT0015997ppy-miR-551a8_......385
MIMAT0015787ppy-miR-193a-5p1_......685
MIMAT0017544aly-miR394a-3p3......_885
MIMAT0014903mmu-miR-3091-5p3_......885
MIMAT0014654tgu-miR-193b-5p1_......685
MIMAT0014541tgu-miR-551-3p8_......385
MIMAT0014495tgu-miR-29851......_685
MIMAT0013894ssc-miR-193a-5p1_......685
MIMAT0013094eca-miR-551b8_......385
MIMAT0013080eca-miR-7118_......385
MIMAT0013051eca-miR-493a3_......885
MIMAT0013025eca-miR-193a-5p1_......685
MIMAT0012921eca-miR-551a8_......385
MIMAT0012820ptr-miR-7118_......385
MIMAT0012796mml-miR-7118_......385
MIMAT0012764mdo-miR-551b-3p8_......385
MIMAT0012763mdo-miR-551a8_......385
MIMAT0012734hsa-miR-7118_......385
MIMAT0012427dsi-miR-1003-5p1......_685
MIMAT0012425dsi-miR-1012-5p1......_685
MIMAT0012000bta-miR-24303_......885
MIMAT0011904bta-miR-23661_......685
MIMAT0009913cfa-miR-551b8_......385
MIMAT0009912cfa-miR-551a8_......385
MIMAT0009347bta-miR-551a8_......385
MIMAT0008232ptr-miR-551b8_......385
MIMAT0008231ptr-miR-551a8_......385
MIMAT0006735cfa-miR-193a1_......685
MIMAT0006420mml-miR-551b-3p8_......385
MIMAT0006419mml-miR-551a8_......385
MIMAT0006225mml-miR-193a-5p1_......685
MIMAT0026787gga-miR-193a-5p1_......685
MIMAT0007569gga-miR-16821_......685
MIMAT0015245cin-miR-1473-5p6......_185
MIMAT0007290gga-miR-551-3p8_......385
MIMAT0007130oan-miR-551-3p8_......385
MIMAT0006919oan-miR-13461......_685
MIMAT0005585mml-miR-12301......_685
MIMAT0022942hsa-miR-1229-5p1......_685
MIMAT0005574mml-miR-1225-5p1......_685
MIMAT0005572hsa-miR-1225-5p1......_685
MIMAT0005383cre-miR11462_......785
MIMAT0026677mdo-miR-193a-5p1_......685
MIMAT0003794bta-miR-193a-5p1_......685
MIMAT0003890mmu-miR-551b-3p8_......385
MIMAT0019091rlcv-miR-rL1-15-5p6......_185
MIMAT0003233hsa-miR-551b-3p8_......385
MIMAT0003214hsa-miR-551a8_......385
MIMAT0031981dre-miR-193a-5p1_......685
MIMAT0004736rno-miR-193a-5p1_......685
MIMAT0004614hsa-miR-193a-5p1_......685
MIMAT0004544mmu-miR-193a-5p1_......685
MIMAT0015095cel-miR-42-5p1......_685