Result for your query miRNA sequence
>rrv-miR-rr1-3-5p
guguuuag

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gtgtttag8
MIMAT0028189dev-miR-D16-3p8........1100
MIMAT0015794ppy-miR-199b-5p1........8100
MIMAT0036392gma-miR97581_.......787
MIMAT0035292gsa-miR-124b-5p1......._787
MIMAT0028987oan-miR-7419-3p1_.......787
MIMAT0028853mdo-miR-7386e-3p8......._287
MIMAT0028271mml-miR-7168-3p2......._887
MIMAT0032121gma-miR5035-3p1_.......787
MIMAT0017626aly-miR840-3p2_.......887
MIMAT0012501dsi-miR-9757......._187
MIMAT0009211osa-miR1850.32_.......887
MIMAT0015257cin-miR-124-2-5p2......._887
MIMAT0005491dme-miR-975-5p7......._187
MIMAT0032021ath-miR840-3p2_.......887
MIMAT0007836osa-miR18791......g.887
MIMAT0020850dme-miR-956-5p1......g.887
MIMAT0037151ata-miR395b-3p3......__875
MIMAT0037050ssc-miR-9832-3p1__......675
MIMAT0036968gra-miR827b3_......_875
MIMAT0036895oha-miR-30d-5p8_......_375
MIMAT0036892oha-miR-30c-5p8_......_375
MIMAT0036890oha-miR-30b-5p8_......_375
MIMAT0036888oha-miR-30a-5p8_......_375
MIMAT0036886oha-miR-30e-5p8_......_375
MIMAT0036585tch-miR-30c-5p8_......_375
MIMAT0036562tch-miR-30a-5p8_......_375
MIMAT0036503tch-miR-30b-5p8_......_375
MIMAT0036130chi-miR-30f-5p8_......_375
MIMAT0036128chi-miR-30e-5p8_......_375
MIMAT0036125chi-miR-30c-5p8_......_375
MIMAT0036123chi-miR-30b-5p8_......_375
MIMAT0036121chi-miR-30a-5p8_......_375
MIMAT0035693bra-miR9567-5p6_......_175
MIMAT0035633dvi-miR-9541-3p1__......675
MIMAT0035192efu-miR-30b8_......_375
MIMAT0034264gra-miR8639e6_......_175
MIMAT0034263gra-miR8639d6_......_175
MIMAT0033995gra-miR8639i6_......_175
MIMAT0033994gra-miR8639h6_......_175
MIMAT0033993gra-miR8639g6_......_175
MIMAT0033992gra-miR8639f6_......_175
MIMAT0033991gra-miR8639c6_......_175
MIMAT0033990gra-miR8639b6_......_175
MIMAT0033989gra-miR8639a6_......_175
MIMAT0033525sma-miR-8410-3p2......__775
MIMAT0033115ppc-miR-8299-5p3......__875
MIMAT0032611ssa-miR-30e-5p8_......_375
MIMAT0032608ssa-miR-30d-5p8_......_375
MIMAT0032606ssa-miR-30c-5p8_......_375
MIMAT0032604ssa-miR-30b-5p8_......_375
MIMAT0032600ssa-miR-30a-5p8_......_375
MIMAT0032362ssa-miR-142a-3p2......__775
MIMAT0031842cpa-miR81457_......_275
MIMAT0031530ppe-miR7122b-3p3......__875
MIMAT0030583prd-miR-7896-3p8__......375
MIMAT0030059oar-miR-30d8_......_375
MIMAT0030058oar-miR-30c8_......_375
MIMAT0030057oar-miR-30b8_......_375
MIMAT0030055oar-miR-30a-5p8_......_375
MIMAT0029657cbn-miR-76188......__375
MIMAT0029498ipu-miR-30c8_......_375
MIMAT0029497ipu-miR-30b8_......_375
MIMAT0029354lja-miR75312......__775
MIMAT0029026oan-miR-7436-5p3......__875
MIMAT0028847mdo-miR-7386j-3p8_......_375
MIMAT0028648mdo-miR-7324-5p6......__175
MIMAT0028622mdo-miR-30d-5p8_......_375
MIMAT0028550mdo-miR-30b-5p8_......_375
MIMAT0028502mdo-miR-30c-5p8_......_375
MIMAT0026290ccr-miR-30d8_......_375
MIMAT0026289ccr-miR-30b8_......_375
MIMAT0027767mmu-miR-6933-3p3......__875
MIMAT0025411tgu-miR-30e8_......_375
MIMAT0025179mmu-miR-30f7_......_275
MIMAT0024124ggo-miR-30e8_......_375
MIMAT0024111ggo-miR-30c8_......_375
MIMAT0023948cgr-miR-384-5p8_......_375
MIMAT0023900cgr-miR-30e-5p8_......_375
MIMAT0023898cgr-miR-30c8_......_375
MIMAT0023896cgr-miR-30b-5p8_......_375
MIMAT0023894cgr-miR-30a-5p8_......_375
MIMAT0023497hco-miR-59856......__175
MIMAT0023491hco-miR-59811_......_675
MIMAT0023487hco-miR-59773_......_875
MIMAT0022808sha-miR-30c8_......_375
MIMAT0022807sha-miR-30e8_......_375
MIMAT0022666ola-miR-30a-5p8_......_375
MIMAT0022599ola-miR-30d-5p8_......_375
MIMAT0022598ola-miR-30c8_......_375
MIMAT0021928aca-miR-30e-5p8_......_375
MIMAT0021926aca-miR-30d-5p8_......_375
MIMAT0021924aca-miR-30c-5p8_......_375
MIMAT0021922aca-miR-30b-5p8_......_375
MIMAT0021920aca-miR-30a-5p8_......_375
MIMAT0021362mtr-miR5294c7__......275
MIMAT0021361mtr-miR5294b7__......275
MIMAT0021360mtr-miR5294a7__......275
MIMAT0020723bdi-miR395d-3p3......__875
MIMAT0019877hsa-miR-3591-3p6......__175
MIMAT0019628pma-miR-45953......__875
MIMAT0019609pma-miR-45763_......_875
MIMAT0019431pma-miR-30g8_......_375
MIMAT0019430pma-miR-30f8_......_375
MIMAT0019428pma-miR-30e-5p8_......_375
MIMAT0019427pma-miR-30d8_......_375
MIMAT0019425pma-miR-30c-5p8_......_375
MIMAT0019424pma-miR-30b8_......_375
MIMAT0019422pma-miR-30a-5p8_......_375
MIMAT0018720tca-miR-3838-5p1__......675
MIMAT0018547ame-miR-37718......__375
MIMAT0018133pab-miR37016_......_175
MIMAT0018056dme-miR-3641-3p7__......275
MIMAT0016823cin-miR-4203-3p6_......_175
MIMAT0016811cin-miR-4193-5p2_......_775
MIMAT0016641cin-miR-4076-3p2......__775
MIMAT0015739ppy-miR-30e8_......_375
MIMAT0015738ppy-miR-30d8_......_375
MIMAT0015737ppy-miR-30c8_......_375
MIMAT0015736ppy-miR-30b8_......_375
MIMAT0015492bmo-miR-3304a6_......_175
MIMAT0015457bmo-miR-32726_......_175
MIMAT0015453bmo-miR-3268-3p1......__675
MIMAT0014657tgu-miR-30d-5p8_......_375
MIMAT0014637tgu-miR-30a-5p8_......_375
MIMAT0014521tgu-miR-30c-5p8_......_375
MIMAT0014506tgu-miR-30b-5p8_......_375
MIMAT0013872ssc-miR-30e-5p8_......_375
MIMAT0013871ssc-miR-30d8_......_375
MIMAT0013006eca-miR-30d8_......_375
MIMAT0013005eca-miR-30b8_......_375
MIMAT0012916eca-miR-30e8_......_375
MIMAT0012915eca-miR-30c8_......_375
MIMAT0012873hvt-miR-H17-3p6_......_175
MIMAT0013454mtr-miR2655o2__......775
MIMAT0013453mtr-miR2655n2__......775
MIMAT0013452mtr-miR2655m2__......775
MIMAT0013451mtr-miR2655l2__......775
MIMAT0013450mtr-miR2655k2__......775
MIMAT0013449mtr-miR2655j2__......775
MIMAT0013448mtr-miR2655i2__......775
MIMAT0013447mtr-miR2655h2__......775
MIMAT0013446mtr-miR2655g2__......775
MIMAT0013445mtr-miR2655f2__......775
MIMAT0013444mtr-miR2655e2__......775
MIMAT0013443mtr-miR2655d2__......775
MIMAT0013442mtr-miR2655c2__......775
MIMAT0013440mtr-miR2655a2__......775
MIMAT0010193ssc-miR-30a-5p8_......_375
MIMAT0009282bta-miR-30f8_......_375
MIMAT0008092ptr-miR-30e8_......_375
MIMAT0007756ssc-miR-30b-5p8_......_375
MIMAT0006617cfa-miR-30b8_......_375
MIMAT0006616cfa-miR-30d8_......_375
MIMAT0006605cfa-miR-30c8_......_375
MIMAT0006604cfa-miR-30a8_......_375
MIMAT0006172mml-miR-30e-5p8_......_375
MIMAT0006171mml-miR-30d-5p8_......_375
MIMAT0006170mml-miR-30c-5p8_......_375
MIMAT0007462gga-miR-1597-5p2_......_775
MIMAT0007203oan-miR-30e-5p8_......_375
MIMAT0007117oan-miR-1380-3p1__......675
MIMAT0007043oan-miR-30b-5p8_......_375
MIMAT0007041oan-miR-30d-5p8_......_375
MIMAT0007037oan-miR-30f8_......_375
MIMAT0006913oan-miR-30a-5p8_......_375
MIMAT0006911oan-miR-30c-5p8_......_375
MIMAT0005309rno-miR-384-5p8_......_375
MIMAT0004454mdv2-miR-M15-3p2......__775
MIMAT0004093mdo-miR-30a-5p8_......_375
MIMAT0003941ath-miR7828......__375
MIMAT0003850bta-miR-30c8_......_375
MIMAT0003841bta-miR-30a-5p8_......_375
MIMAT0003799bta-miR-30e-5p8_......_375
MIMAT0003791bta-miR-142-3p2......__775
MIMAT0003678xtr-miR-30e8_......_375
MIMAT0003657xtr-miR-30d8_......_375
MIMAT0003577xtr-miR-30c8_......_375
MIMAT0003576xtr-miR-30b8_......_375
MIMAT0003574xtr-miR-30a-5p8_......_375
MIMAT0003547bta-miR-30b-5p8_......_375
MIMAT0003533bta-miR-30d8_......_375
MIMAT0003023tni-miR-30c8_......_375
MIMAT0003022fru-miR-30c8_......_375
MIMAT0002950tni-miR-30d8_......_375
MIMAT0002949fru-miR-30d8_......_375
MIMAT0002948tni-miR-30b8_......_375
MIMAT0002947fru-miR-30b8_......_375
MIMAT0002620ppa-miR-30d8_......_375
MIMAT0002619mne-miR-30d8_......_375
MIMAT0002618ggo-miR-30d8_......_375
MIMAT0002617ptr-miR-30d8_......_375
MIMAT0002616mne-miR-30c8_......_375
MIMAT0002615lla-miR-30c8_......_375
MIMAT0002614ptr-miR-30c8_......_375
MIMAT0002377ppa-miR-30a-5p8_......_375
MIMAT0002375ppy-miR-30a-5p8_......_375
MIMAT0002373ggo-miR-30a-5p8_......_375
MIMAT0002371ptr-miR-30a-5p8_......_375
MIMAT0002369mml-miR-30a-5p8_......_375
MIMAT0002219ppa-miR-30b8_......_375
MIMAT0002218age-miR-30b8_......_375
MIMAT0002217mne-miR-30b8_......_375
MIMAT0002216lla-miR-30b8_......_375
MIMAT0002215ggo-miR-30b8_......_375
MIMAT0002214ptr-miR-30b8_......_375
MIMAT0002213mml-miR-30b-5p8_......_375
MIMAT0002191kshv-miR-K12-4-5p8__......375
MIMAT0002167ssc-miR-30c-5p8_......_375
MIMAT0001807dre-miR-30e-5p8_......_375
MIMAT0001806dre-miR-30d8_......_375
MIMAT0001805dre-miR-30c-5p8_......_375
MIMAT0001804dre-miR-30b8_......_375
MIMAT0001803dre-miR-30a-5p8_......_375
MIMAT0001177gga-miR-30e-5p8_......_375
MIMAT0001137gga-miR-30c-5p8_......_375
MIMAT0001135gga-miR-30a-5p8_......_375
MIMAT0001130gga-miR-30b-5p8_......_375
MIMAT0001129gga-miR-30d8_......_375
MIMAT0004745mmu-miR-384-5p8_......_375
MIMAT0000808rno-miR-30a-5p8_......_375
MIMAT0000807rno-miR-30d-5p8_......_375
MIMAT0000806rno-miR-30b-5p8_......_375
MIMAT0000805rno-miR-30e-5p8_......_375
MIMAT0000804rno-miR-30c-5p8_......_375
MIMAT0000692hsa-miR-30e-5p8_......_375
MIMAT0000515mmu-miR-30d-5p8_......_375
MIMAT0000514mmu-miR-30c-5p8_......_375
MIMAT0000420hsa-miR-30b-5p8_......_375
MIMAT0000248mmu-miR-30e-5p8_......_375
MIMAT0000245hsa-miR-30d-5p8_......_375
MIMAT0000244hsa-miR-30c-5p8_......_375
MIMAT0000130mmu-miR-30b-5p8_......_375
MIMAT0000128mmu-miR-30a-5p8_......_375
MIMAT0000087hsa-miR-30a-5p8_......_375